Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.1e-180 635.6 321 100.0
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.7e-92 343.6 239 71.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.2e-92 343.2 237 72.2
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 2.2e-92 343.2 244 70.1
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 2.8e-92 342.8 237 71.3
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 8.2e-92 341.3 208 80.8
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.8e-91 340.1 238 72.3
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 2.4e-91 339.7 227 74.9
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 3.1e-91 339.3 208 80.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 9.1e-91 337.8 235 72.8
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.2e-90 337.4 237 71.3
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.5e-90 337.0 237 72.2
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.0e-90 336.7 235 72.3
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 3.5e-90 335.9 226 73.9
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 4.5e-90 335.5 235 70.2
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 7.7e-90 334.7 235 71.9
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.0e-89 334.3 238 68.9
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.0e-89 334.3 235 71.9
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.0e-89 334.3 226 71.2
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.7e-89 333.6 237 70.0
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.9e-89 332.8 225 74.7
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 3.8e-89 332.4 236 70.3
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.0e-89 332.0 222 73.4
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 6.5e-89 331.6 208 77.9
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 6.5e-89 331.6 220 74.1
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 8.5e-89 331.3 235 70.6
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.1e-88 330.9 219 74.4
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.1e-88 330.9 244 67.6
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.4e-88 330.5 219 75.3
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.9e-88 330.1 223 71.7
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.9e-88 330.1 236 69.5
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.9e-88 330.1 248 66.1
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.5e-88 329.7 240 68.3
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 3.2e-88 329.3 219 74.4
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 4.2e-88 328.9 224 71.9
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 4.2e-88 328.9 217 74.7
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 4.2e-88 328.9 236 67.8
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 5.5e-88 328.6 227 72.2
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.2e-87 327.4 211 76.3
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.2e-87 327.4 216 73.6
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.2e-87 327.4 236 68.6
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.6e-87 327.0 237 71.7
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 2.1e-87 326.6 237 68.8
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 4.7e-87 325.5 239 69.0
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 4.7e-87 325.5 241 69.7
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 6.1e-87 325.1 239 67.8
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 6.1e-87 325.1 208 76.0
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 6.1e-87 325.1 202 78.2
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.0e-86 324.3 235 68.9
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 1.0e-86 324.3 236 69.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.0e-86 324.3 211 75.4
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-86 324.3 201 77.6
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-86 324.3 201 77.6
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.0e-86 324.3 201 77.6
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.4e-86 323.9 216 75.0
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.8e-86 323.6 210 75.2
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.3e-86 323.2 219 73.1
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 3.9e-86 322.4 231 70.6
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 3.9e-86 322.4 234 69.7
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 3.9e-86 322.4 219 73.5
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 5.2e-86 322.0 221 74.2
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 5.2e-86 322.0 219 72.6
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.1e-85 320.9 232 69.4
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.1e-85 320.9 232 69.4
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 1.1e-85 320.9 217 72.8
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.0e-85 320.1 202 79.2
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 2.6e-85 319.7 211 74.4
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 2.6e-85 319.7 211 74.4
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 4.4e-85 318.9 224 70.1
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 7.4e-85 318.2 223 71.3
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 7.4e-85 318.2 202 79.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.2e-84 316.6 220 74.1
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 2.8e-84 316.2 202 78.7
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 2.8e-84 316.2 234 68.8
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 3.7e-84 315.8 228 70.2
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 3.7e-84 315.8 239 66.1
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 4.8e-84 315.5 215 73.0
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 6.3e-84 315.1 216 71.8
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 8.2e-84 314.7 225 69.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 1.1e-83 314.3 209 74.2
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.4e-83 313.2 232 69.0
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 3.1e-83 312.8 227 68.3
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 4.1e-83 312.4 235 66.8
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 4.1e-83 312.4 236 67.8
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.3e-83 312.0 236 66.9
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 9.1e-83 311.2 213 74.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 9.1e-83 311.2 185 83.2
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.2e-82 310.8 205 74.1
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.6e-82 309.7 228 69.7
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 3.5e-82 309.3 204 74.5
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 5.9e-82 308.5 201 75.1
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 7.7e-82 308.1 229 69.9
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.0e-81 307.8 218 70.2
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.7e-81 307.0 205 73.7
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 3.6e-79 299.3 218 69.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.4e-78 297.4 202 72.8
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.3e-78 296.6 197 73.6
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 2.6e-77 293.1 222 68.0
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.7e-76 290.4 300 55.0
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 4.8e-76 288.9 178 83.1
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.4e-75 287.3 230 65.7
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 1.9e-72 276.9 196 70.4
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.2e-71 274.2 227 62.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.1e-63 246.9 167 74.9
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.2e-61 241.1 236 55.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.6e-61 240.0 152 77.0
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.3e-60 237.7 155 76.8
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.1e-59 234.6 226 54.4
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 5.4e-59 232.3 157 74.5
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 2.0e-58 230.3 210 55.7
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.5e-58 229.6 212 53.3
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 4.5e-58 229.2 168 66.7
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.3e-57 226.9 201 58.7
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.2e-55 221.1 148 74.3
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 4.7e-55 219.2 225 53.8
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.0e-49 199.9 116 81.9
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.6e-45 186.8 114 80.7
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 6.6e-33 145.6 196 45.4
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 2.5e-32 143.7 108 67.6
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.4e-21 106.3 116 50.0
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.9e-20 102.8 69 68.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 4.8e-07 59.7 34 76.5
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 3.1e-06 57.0 62 51.6


User provided reference genes

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