Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 6.8e-79 297.7 211 100.0
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 2.5e-33 146.4 192 54.2
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.3e-32 144.1 165 58.8
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 2.2e-32 143.3 157 62.4
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 2.2e-32 143.3 157 62.4
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 6.3e-32 141.7 214 50.5
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 1.1e-31 141.0 161 59.6
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.1e-31 141.0 157 61.1
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.1e-31 141.0 165 58.2
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.1e-31 141.0 165 58.2
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 1.8e-31 140.2 157 61.1
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 2.4e-31 139.8 191 51.8
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 3.1e-31 139.4 159 57.2
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 4.1e-31 139.0 159 59.1
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 5.3e-31 138.7 162 59.9
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 5.3e-31 138.7 162 59.3
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 5.3e-31 138.7 161 57.8
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 5.3e-31 138.7 161 59.6
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 6.9e-31 138.3 157 58.6
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 9.1e-31 137.9 162 56.8
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 9.1e-31 137.9 166 55.4
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.2e-30 137.5 166 55.4
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 1.2e-30 137.5 166 55.4
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.5e-30 137.1 162 58.6
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 2.0e-30 136.7 157 59.9
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 2.0e-30 136.7 162 57.4
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 3.4e-30 136.0 206 50.5
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 4.5e-30 135.6 159 58.5
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 7.7e-30 134.8 159 59.1
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 7.7e-30 134.8 165 57.6
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 1.7e-29 133.7 157 58.0
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.7e-29 133.7 170 55.9
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 1.7e-29 133.7 162 56.8
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 1.7e-29 133.7 166 54.8
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 1.7e-29 133.7 156 59.0
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 1.7e-29 133.7 164 56.7
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 2.2e-29 133.3 165 55.8
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 2.2e-29 133.3 210 48.1
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.2e-29 133.3 210 48.1
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 2.2e-29 133.3 199 49.7
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 2.9e-29 132.9 162 55.6
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 3.8e-29 132.5 156 59.6
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 3.8e-29 132.5 156 59.6
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 5.0e-29 132.1 162 57.4
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 5.0e-29 132.1 194 49.5
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 1.1e-28 131.0 157 59.9
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 1.4e-28 130.6 162 55.6
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.4e-28 130.6 157 58.0
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.9e-28 130.2 157 58.0
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.9e-28 130.2 156 58.3
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.9e-28 130.2 160 57.5
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 1.9e-28 130.2 162 56.2
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 2.5e-28 129.8 168 54.8
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 2.5e-28 129.8 156 58.3
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.5e-28 129.8 162 54.3
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 2.5e-28 129.8 157 56.7
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 3.2e-28 129.4 162 56.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 3.2e-28 129.4 157 58.0
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 4.2e-28 129.0 158 58.2
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 5.5e-28 128.6 159 59.1
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 5.5e-28 128.6 171 55.6
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 7.2e-28 128.3 157 56.1
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 9.4e-28 127.9 162 54.3
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 1.2e-27 127.5 157 57.3
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 1.2e-27 127.5 157 57.3
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 1.2e-27 127.5 157 57.3
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-27 127.1 157 57.3
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 1.6e-27 127.1 165 53.9
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 2.7e-27 126.3 157 55.4
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 2.7e-27 126.3 157 57.3
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 2.7e-27 126.3 156 56.4
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 2.7e-27 126.3 154 56.5
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 4.7e-27 125.6 168 53.0
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 7.9e-27 124.8 154 57.1
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.0e-26 124.4 195 48.7
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.3e-26 123.2 157 55.4
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 2.3e-26 123.2 157 55.4
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 2.3e-26 123.2 157 55.4
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 2.3e-26 123.2 157 55.4
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 3.0e-26 122.9 146 60.3
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 3.0e-26 122.9 206 45.1
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 6.7e-26 121.7 159 56.6
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 6.7e-26 121.7 157 56.1
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 8.8e-26 121.3 157 54.1
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.1e-25 120.9 159 56.6
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 3.3e-25 119.4 149 57.0
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 4.4e-25 119.0 161 54.0
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 4.4e-25 119.0 159 55.3
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 7.4e-25 118.2 162 52.5
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.3e-24 117.5 150 56.7
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 2.8e-24 116.3 156 54.5
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 3.7e-24 115.9 149 56.4
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 3.7e-24 115.9 166 51.8
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 6.3e-24 115.2 148 55.4
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 6.3e-24 115.2 156 53.2
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.4e-23 114.0 182 59.9
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 2.4e-23 113.2 162 50.6
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 4.1e-23 112.5 159 52.8
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 1.5e-22 110.5 206 45.6
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.5e-22 110.5 157 51.6
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 2.6e-22 109.8 151 53.6
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 4.5e-22 109.0 70 71.4
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 1.0e-21 107.8 133 58.6
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 2.9e-21 106.3 156 53.2
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 1.9e-20 103.6 161 49.1
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 1.9e-20 103.6 162 48.8
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 5.5e-20 102.1 157 58.6
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.2e-19 100.9 68 66.2
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 1.2e-19 100.9 166 46.4
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 1.6e-19 100.5 157 48.4
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 1.4e-18 97.4 209 46.4
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 5.2e-18 95.5 159 47.2
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.5e-17 94.0 68 69.1
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 2.4e-15 86.7 54 68.5
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 7.0e-15 85.1 150 49.3
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 2.6e-14 83.2 209 47.8
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.0e-13 81.3 54 68.5
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 9.8e-09 64.7 74 48.6
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 1.4e-07 60.8 136 34.6
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 2.4e-07 60.1 140 47.9


User provided reference genes

Program Settings