Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24910 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 0.0e+00 1405.2 675 100.0
SEGI_37021 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 0.0e+00 1384.0 675 98.7
SEGI_29464 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.6e-196 689.5 560 65.0
SEGI_31833 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 6.6e-176 621.7 418 75.4
SEGI_18074 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 6.7e-160 568.5 315 87.6
SEGI_05085 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.1e-159 567.8 369 76.2
SEGI_27513 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 9.3e-154 548.1 367 74.9
SEGI_40446 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 5.3e-133 479.2 401 62.8
SEGI_15985 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.3e-110 404.8 427 53.6
SEGI_29928 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.0e-108 397.5 443 52.6
SEGI_35823 Sequoiadendron giganteum HOM05D004433 ORTHO05D005251 9.2e-77 292.4 250 60.8
SEGI_00294 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.9e-75 287.0 233 63.9
SEGI_24116 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.9e-75 287.0 233 63.9
SEGI_05772 Sequoiadendron giganteum HOM05D007858 ORTHO05D012441 1.4e-53 215.3 227 53.3
SEGI_24515 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.5e-52 210.7 258 47.7
SEGI_19597 Sequoiadendron giganteum HOM05D000747 ORTHO05D012441 5.6e-50 203.4 177 61.6
SEGI_32815 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.1e-49 201.4 166 61.4
SEGI_13298 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 4.0e-48 197.2 170 58.8
SEGI_07005 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.9e-45 188.3 224 47.8
SEGI_30071 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.9e-42 178.3 174 54.6
SEGI_33898 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.9e-35 154.1 158 53.8
SEGI_04397 Sequoiadendron giganteum HOM05D000200 ORTHO05D000262 1.4e-29 135.6 222 40.5
SEGI_36399 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 5.1e-19 100.5 130 46.9
SEGI_03293 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 6.7e-19 100.1 82 58.5
SEGI_26626 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 6.7e-19 100.1 82 58.5
SEGI_25655 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 6.3e-17 93.6 497 23.9
SEGI_37560 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.8e-14 84.3 477 26.2
SEGI_34481 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 3.2e-13 81.3 269 27.5
SEGI_40002 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 1.0e-11 76.3 264 25.8
SEGI_37580 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.1e-10 72.8 39 82.1
SEGI_25670 Sequoiadendron giganteum HOM05D000004 ORTHO05D026139 2.0e-10 72.0 74 50.0
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.3e-10 71.2 39 79.5
SEGI_18945 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.8e-09 67.4 39 74.4
SEGI_41519 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.4e-08 65.1 85 40.0
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 4.1e-08 64.3 38 71.1
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.0e-08 63.5 39 71.8
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 9.1e-08 63.2 151 31.1
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.0e-07 62.0 66 48.5
Lalb_Chr01g0021801 Lupinus albus HOM05D000004 ORTHO05D000002 2.0e-07 62.0 51 52.9
SEGI_21685 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.0e-07 62.0 64 42.2
SEGI_39880 Sequoiadendron giganteum HOM05D009239 ORTHO05D008152 2.0e-07 62.0 44 63.6
SEGI_03431 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.6e-07 61.6 240 24.2
SEGI_28788 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.6e-07 61.6 33 81.8
SEGI_01990 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 3.4e-07 61.2 37 73.0
SEGI_35312 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.4e-07 61.2 41 63.4
Lalb_Chr18g0058611 Lupinus albus HOM05D000004 ORTHO05D000002 7.7e-07 60.1 39 66.7
SEGI_08057 Sequoiadendron giganteum HOM05D006301 ORTHO05D009378 1.0e-06 59.7 128 29.7
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.0e-06 59.7 39 69.2
SEGI_29513 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.0e-06 59.7 41 61.0
SEGI_35495 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 1.0e-06 59.7 403 22.1
SEGI_16915 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.7e-06 58.9 50 58.0
Ca_03799_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.2e-06 58.5 39 64.1
SEGI_02211 Sequoiadendron giganteum HOM05D009239 ORTHO05D026139 2.2e-06 58.5 43 62.8
SEGI_06001 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.2e-06 58.5 76 39.5
SEGI_20068 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.2e-06 58.5 41 58.5
SEGI_28839 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.2e-06 58.5 76 39.5
Ah.14g080150 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.9e-06 58.2 39 64.1
Lalb_Chr12g0204591 Lupinus albus HOM05D000004 ORTHO05D000002 2.9e-06 58.2 39 64.1
Atru.chr3.1970 Acer truncatum HOM05D000004 ORTHO05D000002 3.8e-06 57.8 39 64.1
Atru.chr3.1986 Acer truncatum HOM05D000004 ORTHO05D000002 3.8e-06 57.8 39 64.1
CBR_g32220 Chara braunii HOM05D000004 ORTHO05D000002 3.8e-06 57.8 171 29.2
Ca_12944_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.8e-06 57.8 129 30.2
Rhsim11G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-06 57.8 39 66.7
Rhsim13G0093200 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-06 57.8 39 66.7
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 3.8e-06 57.8 39 61.5
SEGI_15314 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.8e-06 57.8 111 33.3
SEGI_15568 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.8e-06 57.8 41 58.5
ECA234G0098 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-06 57.4 109 36.7
ECA238G2069 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-06 57.4 39 61.5
Rhsim01G0254600 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.0e-06 57.4 39 66.7
SEGI_01165 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 5.0e-06 57.4 247 23.1
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-06 57.4 39 61.5
Sopen11g008450 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-06 57.4 39 61.5
Ca_13623_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.5e-06 57.0 39 61.5
Ca_13628_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.5e-06 57.0 39 61.5
SEGI_41301 Sequoiadendron giganteum HOM05D002081 ORTHO05D002088 6.5e-06 57.0 53 50.9
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.5e-06 57.0 39 61.5
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.5e-06 57.0 39 61.5
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.5e-06 57.0 39 61.5
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.5e-06 57.0 39 61.5
CBR_g19008 Chara braunii HOM05D000004 ORTHO05D000002 8.5e-06 56.6 158 29.1
CBR_g19427 Chara braunii HOM05D000019 ORTHO05D000002 8.5e-06 56.6 41 58.5
Ca_25300_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5
FvH4_6g15221 Fragaria vesca HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5
QL01p015808 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
QL03p069728 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
QL05p008770 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
QL05p022806 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
QL09p002786 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 8.5e-06 56.6 46 56.5
Rhsim01G0051200 Rhododendron simsii HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 64.1
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 8.5e-06 56.6 39 61.5
SEGI_10976 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 8.5e-06 56.6 45 51.1
SEGI_25331 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 8.5e-06 56.6 180 26.7
Sopen01g025330 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5
Sopen04g022550 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5
Sopen11g019720 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-06 56.6 39 61.5


User provided reference genes

Program Settings