Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24878 Sequoiadendron giganteum HOM05D006926 ORTHO05D008863 7.5e-57 226.1 327 100.0
TAR365G0466 Trochodendron aralioides HOM05D006926 ORTHO05D008863 1.3e-16 92.4 111 40.5
MBI01_g30450_MAGBIO Magnolia biondii HOM05D006926 ORTHO05D008863 1.1e-15 89.4 105 41.9
COL.COLO4_13863 Corchorus olitorius HOM05D006926 ORTHO05D008863 1.0e-13 82.8 111 36.0
Nn1g09562 Nelumbo nucifera HOM05D006926 ORTHO05D008863 1.3e-13 82.4 111 35.1
Manes.03G195800 Manihot esculenta HOM05D006926 ORTHO05D008863 1.8e-13 82.0 111 35.1
Thecc.04G285300 Theobroma cacao HOM05D006926 ORTHO05D008863 3.0e-13 81.3 110 35.5
QL06p009008 Quercus lobata HOM05D006926 ORTHO05D008863 3.9e-13 80.9 111 35.1
FvH4_4g18230 Fragaria vesca HOM05D006926 ORTHO05D008863 5.1e-13 80.5 111 36.9
FAN12G2558 Fragaria x ananassa HOM05D006926 ORTHO05D008863 5.1e-13 80.5 111 36.9
FAN12G4333 Fragaria x ananassa HOM05D006926 ORTHO05D008863 5.1e-13 80.5 111 36.9
FAN17G0573 Fragaria x ananassa HOM05D006926 ORTHO05D008863 6.7e-13 80.1 111 36.0
Duzib151G0724 Durio zibethinus HOM05D006926 ORTHO05D008863 8.7e-13 79.7 111 34.2
Gohir.D09G239500 Gossypium hirsutum HOM05D006926 ORTHO05D008863 8.7e-13 79.7 111 34.2
Gorai.006G262300 Gossypium raimondii HOM05D006926 ORTHO05D008863 8.7e-13 79.7 111 34.2
Gohir.A09G238600 Gossypium hirsutum HOM05D006926 ORTHO05D008863 1.1e-12 79.3 111 34.2
ECA233G5048 Erigeron canadensis HOM05D006926 ORTHO05D008863 2.5e-12 78.2 111 33.3
Cfa015391 Carpinus fangiana HOM05D006926 ORTHO05D008863 3.3e-12 77.8 111 36.0
Haze_01195 Corylus avellana HOM05D006926 ORTHO05D008863 3.3e-12 77.8 111 35.1
Nn6g34671 Nelumbo nucifera HOM05D006926 ORTHO05D008863 4.3e-12 77.4 111 35.1
CSS0040550 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 7.4e-12 76.6 111 30.6
vmacro08158 Vaccinium macrocarpon HOM05D006926 ORTHO05D008863 1.3e-11 75.9 111 32.4
HanXRQChr05g0150001 Helianthus annuus HOM05D006926 ORTHO05D008863 1.6e-11 75.5 111 32.4
RcHm_v2.0_Chr4g0422371 Rosa chinensis HOM05D006926 ORTHO05D008863 1.6e-11 75.5 110 35.5
VMungo0647G0525 Vigna mungo HOM05D006926 ORTHO05D008863 1.6e-11 75.5 108 35.2
Atru.chr4.2848 Acer truncatum HOM05D006926 ORTHO05D008863 2.2e-11 75.1 111 33.3
Rhsim04G0222900 Rhododendron simsii HOM05D006926 ORTHO05D008863 2.2e-11 75.1 111 30.6
Sabra10G0009000 Salix brachista HOM05D006926 ORTHO05D008863 2.2e-11 75.1 111 35.1
Nn2g14325 Nelumbo nucifera HOM05D006926 ORTHO05D008863 2.8e-11 74.7 111 35.1
Cpa.g.sc16.177 Carica papaya HOM05D006926 ORTHO05D008863 3.7e-11 74.3 111 33.3
Psat2g008440 Pisum sativum HOM05D006926 ORTHO05D008863 4.8e-11 73.9 111 32.4
Prupe.1G135500 Prunus persica HOM05D006926 ORTHO05D008863 4.8e-11 73.9 111 33.3
PSO302G0177 Papaver somniferum HOM05D006926 ORTHO05D008863 6.3e-11 73.6 107 33.6
Potri.010G014100 Populus trichocarpa HOM05D006926 ORTHO05D008863 8.2e-11 73.2 111 33.3
Ah.00g000960 Amaranthus hybridus HOM05D006926 ORTHO05D008863 1.4e-10 72.4 111 31.5
EL10Ac1g01925 Beta vulgaris HOM05D006926 ORTHO05D008863 1.4e-10 72.4 111 32.4
MD08G1066700 Malus domestica HOM05D006926 ORTHO05D008863 1.4e-10 72.4 111 31.5
SHI00269 Sapria himalayana HOM05D006926 ORTHO05D008863 1.4e-10 72.4 112 35.7
THA.LOC104827343 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 1.4e-10 72.4 104 35.6
AUR62040613 Chenopodium quinoa HOM05D006926 ORTHO05D008863 1.8e-10 72.0 111 32.4
Cc01_g06580 Coffea canephora HOM05D006926 ORTHO05D008863 1.8e-10 72.0 111 29.7
Nitab4.5_0000059g0440 Nicotiana tabacum HOM05D006926 ORTHO05D008863 1.8e-10 72.0 111 33.3
Nitab4.5_0005852g0010 Nicotiana tabacum HOM05D006926 ORTHO05D008863 1.8e-10 72.0 111 33.3
AUR62035127 Chenopodium quinoa HOM05D006926 ORTHO05D008863 2.4e-10 71.6 111 32.4
Cc00_g07570 Coffea canephora HOM05D006926 ORTHO05D008863 2.4e-10 71.6 111 29.7
CsaV3_3G014680 Cucumis sativus L. HOM05D006926 ORTHO05D008863 3.1e-10 71.2 96 36.5
Actinidia40273 Actinidia chinensis HOM05D006926 ORTHO05D008863 4.1e-10 70.9 96 35.4
Lj9C380T3 Lonicera japonica HOM05D006926 ORTHO05D008863 4.1e-10 70.9 111 32.4
Thhalv10020026m.g Eutrema salsugineum HOM05D006926 ORTHO05D008863 5.3e-10 70.5 107 32.7
PGSC0003DMG400006295 Solanum tuberosum HOM05D006926 ORTHO05D008863 5.3e-10 70.5 111 33.3
THA.LOC104818923 Tarenaya hassleriana HOM05D006926 ORTHO05D008863 5.3e-10 70.5 111 30.6
TWI09G0560 Tripterygium wilfordii HOM05D006926 ORTHO05D008863 5.3e-10 70.5 111 31.5
ClCG05G006130 Citrullus lanatus HOM05D006926 ORTHO05D008863 6.9e-10 70.1 112 33.0
Sed0000576 Sechium edule HOM05D006926 ORTHO05D008863 6.9e-10 70.1 98 35.7
Migut.G00155 Erythranthe guttata HOM05D006926 ORTHO05D008863 9.0e-10 69.7 117 33.3
DCAR_006643 Daucus carota HOM05D006926 ORTHO05D008863 1.2e-09 69.3 110 30.9
Hund12224 Selenicereus undatus HOM05D006926 ORTHO05D008863 1.2e-09 69.3 111 32.4
Solyc01g080720.4 Solanum lycopersicum HOM05D006926 ORTHO05D008863 1.2e-09 69.3 111 32.4
CANSAT78G1021 Cannabis sativa HOM05D006926 ORTHO05D008863 1.5e-09 68.9 111 32.4
A03p34960 Brassica napus HOM05D006926 ORTHO05D008863 2.0e-09 68.6 115 33.0
BraA03t12676Z Brassica rapa HOM05D006926 ORTHO05D008863 2.6e-09 68.2 115 33.0
CAN.G185.37 Capsicum annuum HOM05D006926 ORTHO05D008863 2.6e-09 68.2 111 31.5
Peaxi162Scf01123g00213 Petunia axillaris HOM05D006926 ORTHO05D008863 2.6e-09 68.2 111 31.5
Oeu029705.1 Olea europaea HOM05D006926 ORTHO05D008863 4.5e-09 67.4 117 30.8
Sc10g0006430 Simmondsia chinensis HOM05D006926 ORTHO05D008863 4.5e-09 67.4 111 28.8
PGR031G3585 Punica granatum HOM05D006926 ORTHO05D008863 5.9e-09 67.0 111 26.1
AL159U10010 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 7.7e-09 66.6 109 32.1
AL3G18040 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.0e-08 66.2 107 32.7
AL3G18070 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.0e-08 66.2 107 32.7
AL3G18090 Arabidopsis lyrata HOM05D006926 ORTHO05D008863 1.0e-08 66.2 107 32.7
CSS0048032 Camellia sinensis var. sinensis HOM05D006926 ORTHO05D008863 1.0e-08 66.2 111 29.7
CARHR081530 Cardamine hirsuta HOM05D006926 ORTHO05D008863 1.3e-08 65.9 109 32.1
AT3G06920 Arabidopsis thaliana HOM05D006926 ORTHO05D008863 1.7e-08 65.5 109 32.1
Aqoxy5G00729 Aquilegia oxysepala HOM05D004412 ORTHO05D005316 2.2e-08 65.1 111 30.6
Lalb_Chr17g0348851 Lupinus albus HOM05D006926 ORTHO05D008863 2.2e-08 65.1 100 30.0
C03p42540 Brassica napus HOM05D006926 ORTHO05D008863 3.8e-08 64.3 116 30.2
Aa31LG5G17490 Aethionema arabicum HOM05D006926 ORTHO05D008863 5.0e-08 63.9 96 33.3
BolC3t16524H Brassica oleracea HOM05D006926 ORTHO05D008863 5.0e-08 63.9 108 31.5
Sp3g05870 Schrenkiella parvula HOM05D006926 ORTHO05D008863 5.0e-08 63.9 96 34.4
MSTRG.10097 Avicennia marina HOM05D006926 ORTHO05D008863 8.5e-08 63.2 100 34.0
Sopen01g030780 Solanum pennellii HOM05D006926 ORTHO05D008863 2.1e-06 58.5 105 29.5
CDE11G0294 Ceratophyllum demersum HOM05D006926 ORTHO05D008863 3.6e-06 57.8 94 30.9
SalBow1G7679 Salvia bowleyana HOM05D006926 ORTHO05D008863 4.6e-06 57.4 100 32.0
ATR0796G196 Amborella trichopoda HOM05D006926 ORTHO05D008863 7.9e-06 56.6 79 34.2


User provided reference genes

Program Settings