Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 3.5e-83 311.6 161 100.0
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 4.6e-59 231.5 162 72.8
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 3.9e-58 228.4 162 72.2
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 1.5e-57 226.5 162 71.6
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 5.6e-57 224.6 162 71.0
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 7.3e-57 224.2 162 69.8
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 9.6e-57 223.8 162 70.4
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 9.6e-57 223.8 162 69.1
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 9.6e-57 223.8 162 69.1
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 1.3e-56 223.4 162 71.0
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 1.3e-56 223.4 162 69.1
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 1.3e-56 223.4 162 69.1
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.3e-56 223.4 162 69.1
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 1.6e-56 223.0 162 69.8
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.6e-56 223.0 162 69.1
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 2.1e-56 222.6 162 69.1
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 2.8e-56 222.2 161 71.4
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 4.8e-56 221.5 162 71.0
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 6.2e-56 221.1 162 70.4
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 6.2e-56 221.1 162 70.4
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 1.1e-55 220.3 162 70.4
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.1e-55 220.3 162 69.8
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 1.4e-55 219.9 162 70.4
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 1.8e-55 219.5 162 71.0
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 1.8e-55 219.5 161 69.6
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 1.8e-55 219.5 158 71.5
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 1.8e-55 219.5 158 69.6
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 1.8e-55 219.5 162 71.0
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 2.4e-55 219.2 162 68.5
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 2.4e-55 219.2 162 70.4
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 3.1e-55 218.8 162 69.1
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 3.1e-55 218.8 162 70.4
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 3.1e-55 218.8 162 70.4
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 3.1e-55 218.8 158 71.5
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 3.1e-55 218.8 162 67.9
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 5.3e-55 218.0 162 69.1
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 5.3e-55 218.0 162 69.8
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 5.3e-55 218.0 162 68.5
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 5.3e-55 218.0 162 69.1
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 6.9e-55 217.6 162 69.8
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 6.9e-55 217.6 162 69.8
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 6.9e-55 217.6 162 70.4
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 6.9e-55 217.6 162 69.1
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 9.0e-55 217.2 162 67.9
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 1.2e-54 216.9 162 68.5
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 1.2e-54 216.9 162 67.9
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 1.5e-54 216.5 162 67.3
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 1.5e-54 216.5 162 69.8
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 1.5e-54 216.5 162 67.9
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 2.0e-54 216.1 162 69.1
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 2.6e-54 215.7 162 68.5
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 2.6e-54 215.7 162 67.9
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 2.6e-54 215.7 162 66.7
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 3.4e-54 215.3 162 68.5
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 3.4e-54 215.3 162 67.9
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 3.4e-54 215.3 162 67.9
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 4.5e-54 214.9 162 66.7
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 4.5e-54 214.9 162 67.9
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 4.5e-54 214.9 162 67.3
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 4.5e-54 214.9 162 69.1
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 5.8e-54 214.5 162 67.3
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 5.8e-54 214.5 162 67.3
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 5.8e-54 214.5 162 67.9
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 7.6e-54 214.2 162 69.1
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 7.6e-54 214.2 162 67.3
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 7.6e-54 214.2 162 68.5
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 9.9e-54 213.8 162 67.9
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 9.9e-54 213.8 162 66.7
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 1.3e-53 213.4 159 67.9
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 1.3e-53 213.4 162 65.4
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 1.3e-53 213.4 162 68.5
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.3e-53 213.4 162 67.3
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.3e-53 213.4 162 68.5
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 1.7e-53 213.0 162 67.9
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 2.2e-53 212.6 162 67.3
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 2.9e-53 212.2 162 66.7
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 2.9e-53 212.2 162 68.5
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 2.9e-53 212.2 162 68.5
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 3.8e-53 211.8 162 68.5
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 3.8e-53 211.8 158 69.0
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 6.4e-53 211.1 162 67.3
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 6.4e-53 211.1 162 66.7
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 6.4e-53 211.1 161 66.5
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 6.4e-53 211.1 162 67.9
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 8.4e-53 210.7 162 67.9
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 1.1e-52 210.3 162 66.7
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.9e-52 209.5 158 68.4
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.9e-52 209.5 157 68.8
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 3.2e-52 208.8 162 67.3
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 7.1e-52 207.6 155 67.1
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 7.1e-52 207.6 162 66.7
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.2e-51 206.8 162 66.7
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 4.6e-51 204.9 162 64.8
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 1.9e-49 199.5 162 63.6
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 4.0e-47 191.8 142 69.0
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 2.2e-45 186.0 140 68.6
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 7.1e-44 181.0 158 53.2
EL10Ac3g06395 Beta vulgaris HOM05D005743 ORTHO05D007031 2.1e-43 179.5 147 62.6
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 6.0e-43 177.9 161 52.2
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 5.6e-41 171.4 162 56.2
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 8.2e-40 167.5 152 52.0
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 4.5e-38 161.8 161 50.9
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.0e-37 160.6 117 70.9
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 2.3e-34 149.4 153 48.4
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 6.7e-34 147.9 144 47.9
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 3.7e-32 142.1 110 70.0
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 7.2e-28 127.9 183 43.7
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 1.1e-23 114.0 153 40.5
SEGI_13510 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 6.9e-23 111.3 62 91.9
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 4.5e-22 108.6 162 42.0
Cre11.g479600 Chlamydomonas reinhardtii HOM05D005743 ORTHO05D007031 2.1e-19 99.8 156 35.3
Nitab4.5_0002433g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 2.1e-19 99.8 97 50.5
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 3.0e-18 95.9 62 75.8
ATR0706G260 Amborella trichopoda HOM05D005743 ORTHO05D007031 3.7e-16 89.0 64 70.3
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 8.2e-16 87.8 49 89.8
Nitab4.5_0001879g0130 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.2e-11 73.9 65 58.5
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 4.7e-11 72.0 60 63.3
Medtr7g112660 Medicago truncatula HOM05D005743 ORTHO05D007031 1.7e-08 63.5 53 66.0
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 1.8e-07 60.1 50 52.0
PRCOL_00000753 Prasinoderma coloniale HOM05D018879 ORTHO05D018932 1.6e-06 57.0 115 31.3
Medtr3g062620 Medicago truncatula HOM05D005743 ORTHO05D007031 4.5e-06 55.5 41 68.3


User provided reference genes

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