Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24755 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.2e-66 256.5 140 100.0
SEGI_19459 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-24 116.7 127 57.5
SEGI_40529 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-24 116.7 127 57.5
SEGI_01983 Sequoiadendron giganteum HOM05D000235 ORTHO05D000147 1.5e-18 96.7 186 40.9
SEGI_24392 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.2e-16 89.0 59 72.9
ECA238G1642 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-09 66.6 61 45.9
ECA247G0013 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-09 66.2 97 39.2
Hma1.2p1_0498F.1_g166620 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.5e-09 64.7 70 42.9
SEGI_01368 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.5e-09 64.7 77 36.4
ECA236G4891 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-09 64.3 67 46.3
HanXRQChr14g0436351 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-08 63.9 58 46.6
HanXRQChr14g0436881 Helianthus annuus HOM05D000352 ORTHO05D000001 1.1e-08 63.9 58 46.6
ECA236G1983 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-08 63.5 71 42.3
ECA248G2743 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-08 63.5 71 42.3
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-08 63.5 71 39.4
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-08 63.5 71 39.4
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-08 63.5 71 39.4
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-08 63.5 71 39.4
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-08 63.2 61 44.3
ECA236G1065 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-08 63.2 61 45.9
ECA240G3973 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-08 63.2 71 42.3
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-08 62.8 60 41.7
RcHm_v2.0_Chr1g0329831 Rosa chinensis HOM05D000002 ORTHO05D000001 2.5e-08 62.8 71 43.7
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-08 62.4 61 41.0
Hma1.2p1_3199F.1_g333880 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-08 62.4 70 42.9
Nn1g02756 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.2e-08 62.4 61 41.0
HanXRQChr06g0174011 Helianthus annuus HOM05D000002 ORTHO05D000001 5.5e-08 61.6 58 44.8
RcHm_v2.0_Chr6g0259691 Rosa chinensis HOM05D000002 ORTHO05D000001 5.5e-08 61.6 61 44.3
SHI05323 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-08 61.6 60 40.0
SHI52580 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-08 61.6 60 40.0
SHI53128 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-08 61.6 60 40.0
ECA234G1594 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-08 61.2 61 45.9
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.2e-08 61.2 61 41.0
RhsimUnG0229000 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.2e-08 61.2 61 41.0
Sopen03g025100 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-08 61.2 61 39.3
Thecc.04G046300 Theobroma cacao HOM05D000002 ORTHO05D000001 7.2e-08 61.2 66 37.9
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 9.3e-08 60.8 71 39.4
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 52 48.1
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 52 48.1
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 61 44.3
ECA248G1913 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 60.5 67 40.3
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-07 60.5 58 43.1
HanXRQChr14g0456471 Helianthus annuus HOM05D000103 ORTHO05D000001 1.2e-07 60.5 58 43.1
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-07 60.5 80 41.2
CSS0015467 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-07 60.1 60 43.3
HanXRQChr12g0366491 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-07 60.1 80 41.2
HanXRQChr14g0429821 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-07 60.1 58 43.1
Hma1.2p1_0432F.1_g151640 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-07 60.1 61 47.5
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.6e-07 60.1 79 34.2
Sopen04g021420 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-07 60.1 71 39.4
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-07 59.7 61 37.7
ECA247G1667 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-07 59.7 61 45.9
CAN.G592.1 Capsicum annuum HOM05D000002 ORTHO05D000001 2.7e-07 59.3 61 41.0
HanXRQChr11g0322801 Helianthus annuus HOM05D000002 ORTHO05D000001 2.7e-07 59.3 58 43.1
PGR031G3720 Punica granatum HOM05D000002 ORTHO05D000001 2.7e-07 59.3 59 40.7
Sopen04g023410 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 59.3 65 40.0
CSS0005727 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-07 58.9 61 36.1
CSS0012713 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-07 58.9 61 39.3
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 58.9 61 41.0
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 58.9 61 41.0
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 58.9 61 41.0
Sopen06g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-07 58.9 61 41.0
CSS0028411 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-07 58.5 73 35.6
ECA232G3865 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-07 58.5 61 41.0
CSS0032569 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-07 58.2 52 46.2
ECA232G1539 Erigeron canadensis HOM05D001472 ORTHO05D002655 6.1e-07 58.2 71 40.8
ECA232G4777 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.1e-07 58.2 70 40.0
HanXRQChr05g0136641 Helianthus annuus HOM05D000309 ORTHO05D000001 6.1e-07 58.2 58 43.1
Hma1.2p1_0542F.1_g175110 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.1e-07 58.2 70 38.6
CSS0017329 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 60 40.0
CSS0036210 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 60 40.0
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 60 45.0
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 71 35.2
ECA232G2570 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 44.3
PSO210G3593 Papaver somniferum HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 39.3
PSO210G7008 Papaver somniferum HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 41.0
PSO455G0019 Papaver somniferum HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 44.3
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 39.3
Rhsim03G0172600 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 41.0
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-07 57.8 61 37.7
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 60 43.3
CSS0047943 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 60 43.3
AUR62040404 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.0e-06 57.4 67 38.8
ECA233G6135 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 61 41.0
ECA247G3746 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-06 57.4 67 40.3
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 1.0e-06 57.4 58 44.8
VMungo1127G2280 Vigna mungo HOM05D001041 ORTHO05D000846 1.0e-06 57.4 67 37.3
Ah.10g028550 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-06 57.0 65 41.5
HanXRQChr02g0050541 Helianthus annuus HOM05D000002 ORTHO05D000001 1.3e-06 57.0 73 41.1
Sopen11g022020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 57.0 61 41.0
CsaV3_6G030740 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.8e-06 56.6 67 41.8
FvH4_3g06912 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-06 56.6 61 41.0
Hma1.2p1_1719F.1_g299230 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 56.6 66 34.8
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.8e-06 56.6 61 39.3
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.8e-06 56.6 61 39.3
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 1.8e-06 56.6 60 41.7
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.3e-06 56.2 59 44.1
CsaV3_3G020670 Cucumis sativus L. HOM05D000002 ORTHO05D000001 2.3e-06 56.2 78 33.3
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.3e-06 56.2 61 39.3
RcHm_v2.0_Chr5g0080061 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 56.2 60 40.0
SEGI_07554 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.3e-06 56.2 60 40.0
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-06 56.2 149 28.2
CSS0007079 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 60 40.0
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 61 37.7
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 61 37.7
ECA246G4098 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 61 42.6
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 3.0e-06 55.8 58 43.1
Hma1.2p1_1498F.1_g287120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-06 55.8 60 36.7
Hma1.2p1_1768F.1_g301590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-06 55.8 66 34.8
PSO478G0811 Papaver somniferum HOM05D000002 ORTHO05D000001 3.0e-06 55.8 61 39.3
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-06 55.8 60 41.7
SHI10298 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-06 55.8 60 41.7
CSS0008047 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-06 55.5 60 41.7
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-06 55.5 60 38.3
AUR62026911 Chenopodium quinoa HOM05D000002 ORTHO05D000001 3.9e-06 55.5 60 38.3
ECA240G2823 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-06 55.5 61 39.3
HanXRQChr06g0173631 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-06 55.5 58 44.8
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 3.9e-06 55.5 60 38.3
TPR.G34461 Trifolium pratense HOM05D000002 ORTHO05D000001 3.9e-06 55.5 60 36.7
ECA246G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-06 55.1 52 51.9
Hma1.2p1_0774F.1_g216300 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.1e-06 55.1 60 36.7
AUR62024394 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 60 35.0
AUR62039609 Chenopodium quinoa HOM05D000002 ORTHO05D000001 6.7e-06 54.7 67 38.8
Ca_10824_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 6.7e-06 54.7 62 41.9
ECA236G1856 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-06 54.7 61 37.7
Hma1.2p1_0764F.1_g215020 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-06 54.7 72 33.3
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-06 54.7 61 41.0
THA.LOC104820084 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.7e-06 54.7 61 39.3
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.7e-06 54.3 60 41.7
AUR62034726 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.7e-06 54.3 60 38.3
ECA248G2246 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.7e-06 54.3 67 38.8
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.7e-06 54.3 61 37.7
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.7e-06 54.3 61 37.7
PSO541G3278 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 54.3 61 36.1


User provided reference genes

Program Settings