Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 1.2e-109 399.8 199 100.0
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.7e-15 87.0 178 31.5
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.9e-15 85.9 193 31.6
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 3.9e-15 85.9 181 31.5
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 5.0e-15 85.5 182 30.2
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 6.6e-15 85.1 191 30.9
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 8.6e-15 84.7 177 32.8
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.1e-14 84.3 178 30.3
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 1.1e-14 84.3 180 33.9
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.1e-14 84.3 189 30.7
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 1.9e-14 83.6 181 29.3
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 2.5e-14 83.2 179 36.9
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 4.3e-14 82.4 181 33.1
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 4.3e-14 82.4 196 30.6
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 5.6e-14 82.0 186 31.7
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 5.6e-14 82.0 180 29.4
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 5.6e-14 82.0 178 29.2
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 5.6e-14 82.0 181 29.8
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 5.6e-14 82.0 190 28.9
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 7.3e-14 81.6 178 30.9
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 9.5e-14 81.3 180 32.2
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.2e-13 80.9 179 31.8
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 1.2e-13 80.9 179 33.0
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.2e-13 80.9 188 31.4
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.6e-13 80.5 180 30.6
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 2.1e-13 80.1 157 33.8
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 2.1e-13 80.1 176 31.2
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.1e-13 80.1 185 31.4
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 2.1e-13 80.1 194 29.9
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 2.8e-13 79.7 179 27.9
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 2.8e-13 79.7 176 31.2
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 3.6e-13 79.3 180 32.8
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 3.6e-13 79.3 180 32.8
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 3.6e-13 79.3 194 28.4
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 4.7e-13 79.0 181 28.7
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 6.2e-13 78.6 194 28.4
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 6.2e-13 78.6 190 31.1
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 8.0e-13 78.2 179 29.1
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.1e-12 77.8 179 31.8
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 2.3e-12 76.6 193 31.6
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 2.3e-12 76.6 193 31.6
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 3.1e-12 76.3 178 30.9
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 4.0e-12 75.9 159 30.2
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 4.0e-12 75.9 181 27.6
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 5.2e-12 75.5 187 28.3
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 5.2e-12 75.5 192 31.8
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 6.8e-12 75.1 189 29.6
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 6.8e-12 75.1 189 30.2
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 6.8e-12 75.1 181 29.8
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 8.9e-12 74.7 181 28.7
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 1.2e-11 74.3 182 29.7
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.2e-11 74.3 178 32.0
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 1.2e-11 74.3 179 29.1
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 1.2e-11 74.3 200 29.5
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 1.5e-11 73.9 186 30.6
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 2.6e-11 73.2 216 28.2
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 4.4e-11 72.4 181 29.8
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 9.8e-11 71.2 182 25.8
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 1.3e-10 70.9 56 53.6
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.3e-10 70.9 181 29.8
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 3.7e-10 69.3 208 27.4
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 3.7e-10 69.3 186 28.5
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 6.4e-10 68.6 181 30.9
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 8.3e-10 68.2 64 50.0
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 8.3e-10 68.2 206 26.7
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 1.4e-09 67.4 62 48.4
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 5.4e-09 65.5 171 29.2
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 7.0e-09 65.1 158 32.3
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 9.2e-09 64.7 56 51.8
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.3e-07 60.8 89 33.7


User provided reference genes

Program Settings