Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24544 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 8.0e-219 763.5 384 100.0
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.3e-40 170.6 144 64.6
SEGI_02293 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.1e-40 169.5 161 61.5
SEGI_40610 Sequoiadendron giganteum HOM05D001248 ORTHO05D001183 1.8e-37 161.0 154 61.0
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 7.2e-34 149.1 138 60.9
SEGI_33152 Sequoiadendron giganteum HOM05D001079 ORTHO05D000945 1.6e-33 147.9 465 32.9
SEGI_37380 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.6e-33 147.9 164 57.9
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 4.6e-33 146.4 123 66.7
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 7.7e-28 129.0 194 47.9
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 2.5e-26 124.0 128 54.7
SEGI_21223 Sequoiadendron giganteum HOM05D000211 ORTHO05D002517 2.7e-25 120.6 121 62.8
SEGI_07136 Sequoiadendron giganteum HOM05D002863 ORTHO05D005691 4.1e-21 106.7 128 55.5
SEGI_25865 Sequoiadendron giganteum HOM05D000010 ORTHO05D004484 6.5e-19 99.4 59 81.4
SEGI_33894 Sequoiadendron giganteum HOM05D001800 ORTHO05D009274 1.1e-18 98.6 102 58.8
SEGI_29245 Sequoiadendron giganteum HOM05D002007 ORTHO05D000355 5.5e-18 96.3 153 47.1
SEGI_28395 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 6.7e-16 89.4 76 65.8
SEGI_10507 Sequoiadendron giganteum HOM05D000796 ORTHO05D000674 7.4e-15 85.9 116 51.7
SEGI_19268 Sequoiadendron giganteum HOM05D000796 ORTHO05D000674 7.4e-15 85.9 116 51.7
SEGI_06166 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.2e-14 84.3 68 67.6
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 4.8e-14 83.2 123 46.3
SEGI_22991 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 6.3e-14 82.8 79 62.0
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 1.4e-13 81.6 86 58.1
SEGI_09828 Sequoiadendron giganteum HOM05D001057 ORTHO05D002028 3.1e-13 80.5 144 44.4
SEGI_19441 Sequoiadendron giganteum HOM05D001057 ORTHO05D002028 3.1e-13 80.5 144 44.4
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 5.3e-13 79.7 124 47.6
SEGI_39792 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.0e-13 79.3 154 41.6
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 9.1e-13 79.0 127 44.9
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.9e-12 76.3 110 45.5
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 7.7e-12 75.9 110 45.5
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 7.7e-12 75.9 110 47.3
SEGI_24945 Sequoiadendron giganteum HOM05D000075 ORTHO05D000073 1.3e-11 75.1 76 59.2
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 1.7e-11 74.7 122 43.4
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 2.9e-11 73.9 100 46.0
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 2.9e-11 73.9 100 46.0
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 2.9e-11 73.9 140 40.0
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 2.9e-11 73.9 100 46.0
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 5.0e-11 73.2 145 40.0
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 5.0e-11 73.2 123 42.3
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 6.5e-11 72.8 128 41.4
SEGI_15429 Sequoiadendron giganteum HOM05D000038 ORTHO05D000143 6.5e-11 72.8 185 36.8
SEGI_23007 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 2.5e-10 70.9 178 37.6
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 3.2e-10 70.5 117 43.6
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 3.2e-10 70.5 111 45.0
SEGI_03745 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.2e-10 70.5 85 51.8
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 4.2e-10 70.1 125 42.4
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 4.2e-10 70.1 115 41.7
SEGI_06602 Sequoiadendron giganteum HOM05D001808 ORTHO05D000007 5.5e-10 69.7 200 34.5
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 7.2e-10 69.3 97 47.4
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 7.2e-10 69.3 97 45.4
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 7.2e-10 69.3 101 46.5
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 7.2e-10 69.3 128 43.8
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 9.4e-10 68.9 134 44.0
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.2e-09 68.6 120 41.7
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 1.2e-09 68.6 120 45.8
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 1.2e-09 68.6 105 45.7
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 1.6e-09 68.2 100 47.0
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 2.7e-09 67.4 101 42.6
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 2.7e-09 67.4 115 45.2
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 2.7e-09 67.4 130 40.0
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 4.7e-09 66.6 141 42.6
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 6.1e-09 66.2 98 40.8
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 6.1e-09 66.2 121 42.1
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 6.1e-09 66.2 104 43.3
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 8.0e-09 65.9 97 45.4
SEGI_14504 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 8.0e-09 65.9 59 66.1
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 8.0e-09 65.9 161 35.4
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 1.0e-08 65.5 116 43.1
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-08 65.1 97 45.4
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-08 65.1 97 45.4
SEGI_22729 Sequoiadendron giganteum HOM05D002250 ORTHO05D002393 1.4e-08 65.1 141 39.7
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 1.4e-08 65.1 105 47.6
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 1.4e-08 65.1 106 43.4
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.8e-08 64.7 147 38.1
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 2.3e-08 64.3 102 48.0
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 2.3e-08 64.3 112 41.1
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 2.3e-08 64.3 106 43.4
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 3.0e-08 63.9 118 40.7
SEGI_02459 Sequoiadendron giganteum HOM05D000002 ORTHO05D000007 3.0e-08 63.9 143 39.9
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 3.0e-08 63.9 120 44.2
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 4.0e-08 63.5 98 43.9
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 4.0e-08 63.5 162 37.7
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 5.2e-08 63.2 129 41.1
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 5.2e-08 63.2 129 41.1
SEGI_16348 Sequoiadendron giganteum HOM05D001057 ORTHO05D008789 6.7e-08 62.8 136 42.6
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 8.8e-08 62.4 81 45.7
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 1.2e-07 62.0 115 41.7
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 1.2e-07 62.0 150 39.3
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 1.5e-07 61.6 109 40.4
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.5e-07 61.6 94 43.6
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 1.5e-07 61.6 107 41.1
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 2.0e-07 61.2 107 40.2
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 2.6e-07 60.8 113 40.7
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 3.3e-07 60.5 133 37.6
SEGI_11545 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 4.4e-07 60.1 134 35.1
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 4.4e-07 60.1 111 41.4
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 5.7e-07 59.7 112 38.4
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 5.7e-07 59.7 131 38.2
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 5.7e-07 59.7 94 39.4
SEGI_25260 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 5.7e-07 59.7 138 39.9
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 5.7e-07 59.7 118 40.7
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 7.5e-07 59.3 87 42.5
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 9.7e-07 58.9 104 41.3
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 9.7e-07 58.9 109 39.4
SEGI_28827 Sequoiadendron giganteum HOM05D002689 ORTHO05D003129 9.7e-07 58.9 133 39.8
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 9.7e-07 58.9 119 40.3
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.3e-06 58.5 46 63.0
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 1.3e-06 58.5 58 53.4
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 1.3e-06 58.5 115 39.1
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 1.7e-06 58.2 112 39.3
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 1.7e-06 58.2 90 43.3
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 1.7e-06 58.2 96 41.7
SEGI_12565 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.7e-06 58.2 47 63.8
SEGI_21197 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 1.7e-06 58.2 65 50.8
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.7e-06 58.2 109 42.2
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 2.2e-06 57.8 111 45.9
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 2.2e-06 57.8 121 37.2
SEGI_10680 Sequoiadendron giganteum HOM05D001800 ORTHO05D000239 2.2e-06 57.8 100 40.0
SEGI_11009 Sequoiadendron giganteum HOM05D001872 ORTHO05D001859 2.2e-06 57.8 135 40.0
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 2.8e-06 57.4 60 53.3
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 3.7e-06 57.0 62 50.0
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 3.7e-06 57.0 43 65.1
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 3.7e-06 57.0 115 37.4
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 3.7e-06 57.0 121 37.2
SEGI_08949 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.7e-06 57.0 136 36.8
SEGI_18765 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.7e-06 57.0 105 42.9
SEGI_26964 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.7e-06 57.0 136 36.8
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 3.7e-06 57.0 54 55.6
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 4.8e-06 56.6 87 39.1
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 6.3e-06 56.2 108 41.7
SEGI_37752 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 6.3e-06 56.2 141 36.9
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 8.2e-06 55.8 107 40.2
SEGI_19263 Sequoiadendron giganteum HOM05D000427 ORTHO05D000386 8.2e-06 55.8 166 34.3
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 8.2e-06 55.8 94 41.5


User provided reference genes

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