Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24492 Sequoiadendron giganteum HOM05D013614 ORTHO05D006354 7.0e-136 487.3 242 100.0
SEGI_22531 Sequoiadendron giganteum HOM05D000164 ORTHO05D000096 4.3e-53 212.2 136 78.7
SEGI_09043 Sequoiadendron giganteum HOM05D000167 ORTHO05D384682 1.3e-52 210.7 121 86.8
SEGI_23362 Sequoiadendron giganteum HOM05D001900 ORTHO05D003003 1.6e-52 210.3 119 86.6
SEGI_23092 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 2.4e-51 206.5 119 85.7
SEGI_09771 Sequoiadendron giganteum HOM05D000093 ORTHO05D007434 8.5e-49 198.0 119 81.5
SEGI_15993 Sequoiadendron giganteum HOM05D013614 ORTHO05D006354 3.3e-45 186.0 111 81.1
SEGI_10979 Sequoiadendron giganteum HOM05D008993 ORTHO05D010920 1.0e-41 174.5 111 76.6
SEGI_41533 Sequoiadendron giganteum HOM05D000501 ORTHO05D000239 2.4e-27 126.7 110 59.1
SEGI_38872 Sequoiadendron giganteum HOM05D003403 ORTHO05D003889 1.7e-25 120.6 98 60.2
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 1.2e-23 114.4 71 76.1
SEGI_04904 Sequoiadendron giganteum HOM05D000018 ORTHO05D002863 1.4e-14 84.3 75 58.7
SEGI_11716 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 4.1e-11 72.8 75 52.0
SEGI_20241 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 4.1e-11 72.8 73 52.1
SEGI_22027 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 4.1e-11 72.8 73 52.1
SEGI_16494 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 7.0e-11 72.0 77 50.6
SEGI_21455 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 7.0e-11 72.0 76 48.7
SEGI_23351 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 9.2e-11 71.6 72 50.0
SEGI_41347 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 9.2e-11 71.6 67 53.7
SEGI_39945 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.2e-10 71.2 77 50.6
SEGI_08910 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.6e-10 70.9 71 50.7
SEGI_16665 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.6e-10 70.9 75 50.7
SEGI_31671 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.6e-10 70.9 76 50.0
SEGI_37328 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.6e-10 70.9 75 50.7
SEGI_04914 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 2.0e-10 70.5 72 51.4
SEGI_29261 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 2.0e-10 70.5 81 49.4
SEGI_11894 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 2.7e-10 70.1 79 48.1
SEGI_10451 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.5e-10 69.7 71 49.3
SEGI_39929 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.5e-10 69.7 71 52.1
SEGI_16532 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 5.9e-10 68.9 72 47.2
SEGI_28696 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.0e-09 68.2 71 49.3
SEGI_05298 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.3e-09 67.8 67 47.8
SEGI_20475 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.3e-09 67.8 67 52.2
SEGI_29556 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.3e-09 67.8 67 52.2
SEGI_32386 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.3e-09 67.8 67 52.2
SEGI_14195 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 5.0e-09 65.9 71 47.9
SEGI_39343 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 5.0e-09 65.9 70 50.0
SEGI_30014 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 6.6e-09 65.5 109 34.9
SEGI_36925 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 6.6e-09 65.5 100 37.0
SEGI_10313 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.9e-08 63.9 80 41.2
SEGI_29293 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 2.5e-08 63.5 75 46.7
SEGI_10188 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.3e-08 63.2 67 49.3
SEGI_19204 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.3e-08 63.2 75 48.0
SEGI_36827 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.3e-08 63.2 71 47.9
SEGI_40677 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.3e-08 63.2 75 48.0
SEGI_30825 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 4.3e-08 62.8 75 42.7
SEGI_41474 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 5.6e-08 62.4 78 43.6
SEGI_21495 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 2.1e-07 60.5 78 42.3
SEGI_10414 Sequoiadendron giganteum HOM05D293684 ORTHO05D015415 3.6e-07 59.7 71 50.7
SEGI_19989 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.6e-07 59.7 81 39.5
SEGI_19259 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 8.0e-07 58.5 75 45.3
SEGI_20966 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.0e-06 58.2 72 41.7
SEGI_36429 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 1.4e-06 57.8 77 44.2
Lalb_Chr11g0069241 Lupinus albus HOM05D000112 ORTHO05D000564 2.3e-06 57.0 34 82.4
Zm00001eb133000 Zea mays HOM05D000112 ORTHO05D000564 2.3e-06 57.0 34 82.4
Zm00001eb408800 Zea mays HOM05D000112 ORTHO05D000564 2.3e-06 57.0 34 82.4
SEGI_19713 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 3.0e-06 56.6 81 38.3
TAR628G0850 Trochodendron aralioides HOM05D000112 ORTHO05D000564 4.0e-06 56.2 30 90.0
TWI14G0723 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 5.2e-06 55.8 34 79.4
Sed0021231 Sechium edule HOM05D000112 ORTHO05D000564 6.8e-06 55.5 30 90.0
SEGI_09939 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 6.8e-06 55.5 60 53.3
Eucgr.G00076 Eucalyptus grandis HOM05D000112 ORTHO05D000564 8.9e-06 55.1 30 86.7
Oeu000157.1 Olea europaea HOM05D000112 ORTHO05D000564 8.9e-06 55.1 34 79.4
Os11g0523800 Oryza sativa ssp. japonica HOM05D000112 ORTHO05D000564 8.9e-06 55.1 30 90.0
Os12g0479400 Oryza sativa ssp. japonica HOM05D000112 ORTHO05D000564 8.9e-06 55.1 30 90.0


User provided reference genes

Program Settings