Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.3e-210 736.1 373 100.0
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 8.0e-115 417.9 313 67.7
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 2.3e-114 416.4 332 65.1
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 5.7e-113 411.8 306 68.0
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 9.8e-113 411.0 318 66.4
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 1.7e-112 410.2 331 63.4
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 1.7e-112 410.2 331 63.4
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 2.9e-112 409.5 353 61.2
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 4.9e-112 408.7 320 65.3
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.1e-111 407.5 316 66.8
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 1.4e-111 407.1 311 65.9
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 1.4e-111 407.1 315 66.0
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.8e-111 406.8 332 63.3
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 1.8e-111 406.8 314 66.6
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 3.2e-111 406.0 336 61.6
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 3.2e-111 406.0 338 63.3
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 4.1e-111 405.6 363 57.6
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 4.1e-111 405.6 369 58.8
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 5.4e-111 405.2 323 65.0
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 5.4e-111 405.2 325 65.5
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 7.0e-111 404.8 317 65.3
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 9.2e-111 404.4 332 64.2
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 9.2e-111 404.4 334 61.4
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 9.2e-111 404.4 317 65.6
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.2e-110 404.1 332 63.6
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 1.6e-110 403.7 314 65.3
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 3.5e-110 402.5 314 65.3
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 3.5e-110 402.5 310 65.5
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 3.5e-110 402.5 322 64.0
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 3.5e-110 402.5 327 62.1
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 4.6e-110 402.1 333 62.8
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 4.6e-110 402.1 330 62.4
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 6.0e-110 401.7 321 63.2
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 6.0e-110 401.7 314 65.3
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 1.0e-109 401.0 333 62.2
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 1.3e-109 400.6 358 59.8
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 1.3e-109 400.6 337 61.7
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 1.3e-109 400.6 322 63.4
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 1.7e-109 400.2 334 61.7
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 1.7e-109 400.2 323 63.8
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 2.3e-109 399.8 335 61.2
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 2.3e-109 399.8 331 61.3
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 3.0e-109 399.4 332 62.3
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 3.9e-109 399.1 325 64.0
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 5.0e-109 398.7 308 66.6
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 6.6e-109 398.3 314 64.6
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 6.6e-109 398.3 322 63.4
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 8.6e-109 397.9 333 61.3
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 8.6e-109 397.9 369 60.2
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 1.1e-108 397.5 357 59.4
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 1.5e-108 397.1 314 64.3
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 1.5e-108 397.1 290 67.6
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 1.5e-108 397.1 364 58.2
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 2.5e-108 396.4 286 68.5
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 3.3e-108 396.0 352 59.7
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 4.3e-108 395.6 288 68.8
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 4.3e-108 395.6 360 59.2
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 1.2e-107 394.0 362 58.3
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 1.2e-107 394.0 285 67.0
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.2e-107 394.0 330 61.8
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 1.6e-107 393.7 329 60.8
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 1.6e-107 393.7 330 61.8
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 1.6e-107 393.7 335 61.5
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 2.1e-107 393.3 333 61.6
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 2.8e-107 392.9 326 62.9
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 3.6e-107 392.5 318 64.5
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.1e-106 391.0 316 62.3
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.4e-106 390.6 330 61.2
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 1.4e-106 390.6 329 61.1
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.8e-106 390.2 362 58.3
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 2.3e-106 389.8 359 56.5
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 2.3e-106 389.8 322 61.8
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 2.3e-106 389.8 351 59.5
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 3.1e-106 389.4 360 58.3
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 4.0e-106 389.0 331 60.7
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 4.0e-106 389.0 354 59.9
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 4.0e-106 389.0 287 65.9
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 6.8e-106 388.3 323 61.3
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 1.2e-105 387.5 358 57.5
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 1.5e-105 387.1 310 62.9
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 2.0e-105 386.7 288 68.4
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 2.0e-105 386.7 310 62.9
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 2.6e-105 386.3 362 57.2
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 2.6e-105 386.3 362 57.2
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 2.6e-105 386.3 362 57.2
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 4.4e-105 385.6 359 56.5
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 4.4e-105 385.6 333 60.4
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 5.8e-105 385.2 280 66.4
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 7.5e-105 384.8 359 56.8
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 1.3e-104 384.0 358 57.3
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 1.3e-104 384.0 360 57.5
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 2.2e-104 383.3 340 58.2
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 3.2e-103 379.4 275 66.9
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 7.0e-103 378.3 286 64.7
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 9.2e-103 377.9 294 66.7
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 3.0e-101 372.9 283 64.3
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 3.9e-101 372.5 321 59.8
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 3.9e-101 372.5 276 65.9
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 5.0e-101 372.1 276 65.9
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 8.6e-101 371.3 276 66.3
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 1.1e-100 370.9 254 72.0
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.1e-100 370.9 330 58.2
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 1.2e-99 367.5 276 64.9
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.1e-99 366.7 316 60.1
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 2.8e-99 366.3 276 64.1
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 2.8e-99 366.3 390 51.8
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 4.7e-99 365.5 271 66.1
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 8.1e-99 364.8 276 64.1
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 8.1e-99 364.8 326 59.2
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 1.4e-98 364.0 271 65.7
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 1.8e-98 363.6 288 62.8
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 2.3e-98 363.2 271 65.7
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 2.3e-98 363.2 271 65.7
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 2.3e-98 363.2 271 65.7
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 2.3e-98 363.2 271 65.7
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 3.1e-98 362.8 323 61.0
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 5.2e-98 362.1 274 65.7
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 5.2e-98 362.1 274 65.7
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 1.7e-96 357.1 334 57.8
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 2.9e-96 356.3 366 51.4
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 5.1e-93 345.5 396 50.3
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 2.5e-92 343.2 293 61.8
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 9.5e-92 341.3 293 60.8
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 1.8e-90 337.0 295 58.0
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 4.0e-90 335.9 273 60.4
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 8.9e-90 334.7 280 58.9
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 1.7e-88 330.5 261 64.0
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 5.4e-87 325.5 267 64.8
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 2.5e-84 316.6 210 73.8
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 1.4e-82 310.8 299 56.5
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 7.3e-76 288.5 256 56.2
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 1.1e-74 284.6 251 61.4
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 3.4e-73 279.6 192 74.5
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 3.9e-69 266.2 296 50.3
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 6.2e-67 258.8 256 54.7
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 2.7e-62 243.4 236 55.5
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.3e-61 241.1 268 50.7
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 5.7e-52 209.1 252 50.0
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 6.3e-51 205.7 137 73.0
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.4e-50 203.8 205 55.6
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 3.1e-50 203.4 137 73.7
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 1.5e-49 201.1 137 73.0
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 3.4e-49 199.9 131 74.0
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.5e-47 193.7 206 50.0
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 1.3e-43 181.4 162 61.7
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 4.1e-42 176.4 157 56.7
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 4.1e-34 149.8 111 64.9
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 2.6e-33 147.1 99 69.7
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 1.0e-32 145.2 112 62.5
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 6.1e-30 136.0 93 74.2
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.8e-26 124.4 73 76.7
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.2e-25 121.7 73 74.0
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 4.5e-25 119.8 76 73.7
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 6.5e-24 115.9 85 65.9
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 2.1e-22 110.9 114 45.6
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 5.2e-21 106.3 100 49.0
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 1.7e-19 101.3 130 43.1
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 3.7e-19 100.1 103 50.5
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 3.7e-19 100.1 142 40.8
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 1.6e-17 94.7 53 84.9
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 2.1e-14 84.3 55 74.5
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 4.7e-14 83.2 59 74.6
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 2.0e-12 77.8 53 67.9
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 2.6e-12 77.4 59 69.5
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 4.4e-12 76.6 73 49.3
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 5.4e-10 69.7 55 63.6


User provided reference genes

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