Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 5.2e-79 297.7 160 100.0
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.5e-35 152.1 102 72.5
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 7.1e-28 127.9 102 59.8
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 7.1e-28 127.9 102 59.8
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 9.3e-12 74.3 90 45.6
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 2.7e-11 72.8 58 60.3
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 4.6e-11 72.0 81 48.1
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 4.6e-11 72.0 90 45.6
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 6.1e-11 71.6 90 43.3
Cre11.g467641 Chlamydomonas reinhardtii HOM05D017655 ORTHO05D008750 6.1e-11 71.6 112 35.7
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 1.3e-10 70.5 59 57.6
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 1.8e-10 70.1 77 48.1
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 1.8e-10 70.1 80 47.5
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.8e-10 70.1 85 44.7
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 2.3e-10 69.7 79 49.4
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 2.3e-10 69.7 57 59.6
AagrBONN_evm.TU.Sc2ySwM_228.5650 Anthoceros agrestis HOM05D017655 ORTHO05D008750 3.0e-10 69.3 91 42.9
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 3.0e-10 69.3 77 50.6
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 3.9e-10 68.9 68 50.0
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 3.9e-10 68.9 66 53.0
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 5.1e-10 68.6 77 45.5
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 5.1e-10 68.6 63 54.0
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 5.1e-10 68.6 88 45.5
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 6.7e-10 68.2 62 51.6
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 8.7e-10 67.8 62 53.2
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 8.7e-10 67.8 62 53.2
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 8.7e-10 67.8 72 47.2
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 8.7e-10 67.8 58 55.2
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 8.7e-10 67.8 76 48.7
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 1.1e-09 67.4 83 45.8
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 1.9e-09 66.6 94 39.4
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 2.5e-09 66.2 61 50.8
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.3e-09 65.9 95 38.9
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.3e-09 65.9 95 38.9
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.3e-09 65.9 95 38.9
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 3.3e-09 65.9 59 54.2
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 4.3e-09 65.5 86 46.5
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 4.3e-09 65.5 58 53.4
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 4.3e-09 65.5 78 42.3
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 5.7e-09 65.1 61 54.1
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 7.4e-09 64.7 74 44.6
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 9.7e-09 64.3 86 46.5
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 9.7e-09 64.3 57 57.9
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 9.7e-09 64.3 67 52.2
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 9.7e-09 64.3 95 43.2
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 9.7e-09 64.3 90 44.4
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.3e-08 63.9 57 54.4
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.3e-08 63.9 49 57.1
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.3e-08 63.9 81 48.1
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 1.6e-08 63.5 86 44.2
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 1.6e-08 63.5 77 45.5
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.6e-08 63.5 80 45.0
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.6e-08 63.5 80 45.0
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.2e-08 63.2 66 48.5
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 2.2e-08 63.2 86 44.2
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 2.2e-08 63.2 82 45.1
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 2.2e-08 63.2 82 45.1
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 2.2e-08 63.2 86 44.2
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 2.8e-08 62.8 80 46.2
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 2.8e-08 62.8 75 45.3
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 4.8e-08 62.0 77 45.5
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 4.8e-08 62.0 80 42.5
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 6.3e-08 61.6 80 43.8
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 6.3e-08 61.6 80 43.8
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 6.3e-08 61.6 57 54.4
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 8.2e-08 61.2 77 45.5
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 8.2e-08 61.2 77 42.9
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 1.1e-07 60.8 49 59.2
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 1.1e-07 60.8 82 41.5
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 1.1e-07 60.8 84 40.5
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 1.1e-07 60.8 49 55.1
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.4e-07 60.5 45 57.8
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 1.4e-07 60.5 88 40.9
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.1e-07 59.3 70 50.0
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.1e-07 59.3 70 50.0
Cre06.g296900 Chlamydomonas reinhardtii HOM05D017655 ORTHO05D008750 3.1e-07 59.3 54 55.6
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 9.0e-07 57.8 56 53.6
Pp3c8_13230 Physcomitrium patens HOM05D017655 ORTHO05D008750 3.4e-06 55.8 58 46.6
Pp3c2_22120 Physcomitrium patens HOM05D017655 ORTHO05D008750 7.7e-06 54.7 73 41.1


User provided reference genes

Program Settings