Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24376 Sequoiadendron giganteum HOM05D005839 ORTHO05D005686 6.3e-66 253.8 117 100.0
ATR1147G004 Amborella trichopoda HOM05D005839 ORTHO05D005686 1.5e-14 83.2 61 55.7
Cc03_g09160 Coffea canephora HOM05D005839 ORTHO05D005686 8.9e-12 73.9 42 61.9
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 1.5e-11 73.2 63 47.6
arahy.Tifrunner.gnm1.ann1.3YD71H Arachis hypogaea HOM05D005839 ORTHO05D005686 2.0e-11 72.8 44 61.4
arahy.Tifrunner.gnm1.ann1.SAUI5N Arachis hypogaea HOM05D005839 ORTHO05D005686 2.0e-11 72.8 44 61.4
Gohir.A10G130200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.0e-11 72.8 47 59.6
Gohir.D10G136100 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.0e-11 72.8 47 59.6
Gorai.011G150900 Gossypium raimondii HOM05D005839 ORTHO05D005686 2.0e-11 72.8 47 59.6
arahy.Tifrunner.gnm1.ann1.62570H Arachis hypogaea HOM05D005839 ORTHO05D005686 3.4e-11 72.0 66 45.5
Potri.014G146200 Populus trichocarpa HOM05D005839 ORTHO05D005686 3.4e-11 72.0 43 58.1
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 4.4e-11 71.6 83 39.8
Lalb_Chr12g0205781 Lupinus albus HOM05D005839 ORTHO05D005686 5.8e-11 71.2 64 48.4
EL10Ac3g07436 Beta vulgaris HOM05D005839 ORTHO05D005686 7.5e-11 70.9 62 43.5
ECA233G2442 Erigeron canadensis HOM05D005839 ORTHO05D005686 7.5e-11 70.9 57 52.6
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 7.5e-11 70.9 68 45.6
ClCG05G007080 Citrullus lanatus HOM05D005839 ORTHO05D005686 9.9e-11 70.5 42 61.9
MELO3C006781.2 Cucumis melo HOM05D005839 ORTHO05D005686 9.9e-11 70.5 42 61.9
CsaV3_3G015820 Cucumis sativus L. HOM05D005839 ORTHO05D005686 9.9e-11 70.5 42 61.9
Duzib151G0492 Durio zibethinus HOM05D005839 ORTHO05D005686 9.9e-11 70.5 43 58.1
Lj4g0005413 Lotus japonicus HOM05D005839 ORTHO05D005686 9.9e-11 70.5 50 58.0
Aa31LG9G3190 Aethionema arabicum HOM05D010750 ORTHO05D005686 1.3e-10 70.1 52 53.8
Ca_18007_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 1.3e-10 70.1 44 59.1
Gohir.D09G201300 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.3e-10 70.1 68 50.0
Gorai.006G225000 Gossypium raimondii HOM05D005839 ORTHO05D005686 1.3e-10 70.1 68 50.0
arahy.Tifrunner.gnm1.ann1.H8QNW8 Arachis hypogaea HOM05D005839 ORTHO05D005686 1.7e-10 69.7 65 43.1
arahy.Tifrunner.gnm1.ann1.Q2NVSC Arachis hypogaea HOM05D005839 ORTHO05D000011 1.7e-10 69.7 44 59.1
Phvul.003G048600 Phaseolus vulgaris HOM05D005839 ORTHO05D005686 1.7e-10 69.7 64 48.4
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 1.7e-10 69.7 51 52.9
GSVIVG01031570001 Vitis vinifera HOM05D005839 ORTHO05D005686 1.7e-10 69.7 63 46.0
Medtr8g081010 Medicago truncatula HOM05D005839 ORTHO05D005686 2.2e-10 69.3 46 60.9
Sabra02G0179700 Salix brachista HOM05D005839 ORTHO05D005686 2.2e-10 69.3 43 53.5
CSS0003065 Camellia sinensis var. sinensis HOM05D005839 ORTHO05D005686 2.9e-10 68.9 41 61.0
Gohir.A09G207800 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.9e-10 68.9 68 48.5
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 2.9e-10 68.9 71 43.7
Sed0009973 Sechium edule HOM05D005839 ORTHO05D005686 2.9e-10 68.9 41 61.0
Hund19024 Selenicereus undatus HOM05D005839 ORTHO05D005686 2.9e-10 68.9 65 43.1
CARHR220270 Cardamine hirsuta HOM05D010750 ORTHO05D005686 3.7e-10 68.6 56 46.4
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 3.7e-10 68.6 42 59.5
Duzib268G0552 Durio zibethinus HOM05D005839 ORTHO05D005686 3.7e-10 68.6 43 60.5
Glyma.05G150200 Glycine max HOM05D005839 ORTHO05D005686 4.9e-10 68.2 64 46.9
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 4.9e-10 68.2 43 58.1
MSTRG.4261 Avicennia marina HOM05D005839 ORTHO05D005686 6.4e-10 67.8 43 58.1
COL.COLO4_04260 Corchorus olitorius HOM05D005839 ORTHO05D005686 6.4e-10 67.8 38 68.4
Lj6g0025267 Lotus japonicus HOM05D005839 ORTHO05D005686 6.4e-10 67.8 50 52.0
Manes.05G199100 Manihot esculenta HOM05D005839 ORTHO05D005686 6.4e-10 67.8 84 39.3
arahy.Tifrunner.gnm1.ann1.52QBHW Arachis hypogaea HOM05D005839 ORTHO05D005686 8.3e-10 67.4 44 56.8
Sp7g12060 Schrenkiella parvula HOM05D010750 ORTHO05D005686 8.3e-10 67.4 42 57.1
Sed0018641 Sechium edule HOM05D005839 ORTHO05D005686 1.4e-09 66.6 58 48.3
Ah.04g149590 Amaranthus hybridus HOM05D005839 ORTHO05D005686 1.9e-09 66.2 60 45.0
Lsat_1_v5_gn_6_58881 Lactuca sativa HOM05D005839 ORTHO05D005686 1.9e-09 66.2 43 65.1
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 1.9e-09 66.2 71 40.8
Solyc09g092550.4 Solanum lycopersicum HOM05D005839 ORTHO05D005686 1.9e-09 66.2 82 36.6
Migut.G00951 Erythranthe guttata HOM05D005839 ORTHO05D005686 2.4e-09 65.9 72 41.7
Potri.002G235900 Populus trichocarpa HOM05D005839 ORTHO05D005686 2.4e-09 65.9 43 53.5
Atru.chr3.1776 Acer truncatum HOM05D005839 ORTHO05D005686 3.2e-09 65.5 43 53.5
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 3.2e-09 65.5 71 42.3
SalBow2G2330 Salvia bowleyana HOM05D005839 ORTHO05D005686 3.2e-09 65.5 48 52.1
SalBow2G2888 Salvia bowleyana HOM05D005839 ORTHO05D005686 3.2e-09 65.5 48 52.1
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 3.2e-09 65.5 82 37.8
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 4.1e-09 65.1 38 57.9
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 4.1e-09 65.1 82 36.6
TWI53G2144 Tripterygium wilfordii HOM05D005839 ORTHO05D005686 4.1e-09 65.1 42 52.4
VMungo0251G1575 Vigna mungo HOM05D005839 ORTHO05D005686 4.1e-09 65.1 82 36.6
A04p07940 Brassica napus HOM05D010750 ORTHO05D005686 5.4e-09 64.7 39 61.5
BraA04t16484Z Brassica rapa HOM05D010750 ORTHO05D005686 5.4e-09 64.7 39 61.5
Ca_16430_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 5.4e-09 64.7 45 62.2
HanXRQChr07g0186001 Helianthus annuus HOM05D005839 ORTHO05D005686 5.4e-09 64.7 51 56.9
Oeu049072.1 Olea europaea HOM05D005839 ORTHO05D005686 5.4e-09 64.7 75 44.0
MSTRG.9771 Avicennia marina HOM05D005839 ORTHO05D005686 7.1e-09 64.3 42 57.1
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 7.1e-09 64.3 54 48.1
BcaC02g09348 Brassica carinata HOM05D010750 ORTHO05D005686 9.2e-09 63.9 39 61.5
C04p41620 Brassica napus HOM05D010750 ORTHO05D005686 9.2e-09 63.9 39 61.5
AUR62020882 Chenopodium quinoa HOM05D005839 ORTHO05D005686 9.2e-09 63.9 62 41.9
Thhalv10024466m.g Eutrema salsugineum HOM05D010750 ORTHO05D005686 9.2e-09 63.9 93 34.4
FvH4_4g12870 Fragaria vesca HOM05D005839 ORTHO05D005686 9.2e-09 63.9 41 56.1
FAN12G3285 Fragaria x ananassa HOM05D005839 ORTHO05D005686 9.2e-09 63.9 41 56.1
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 1.2e-08 63.5 54 50.0
A08p24270 Brassica napus HOM05D010750 ORTHO05D005686 1.2e-08 63.5 39 61.5
BraA08t34382Z Brassica rapa HOM05D010750 ORTHO05D005686 1.2e-08 63.5 39 61.5
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 1.2e-08 63.5 51 41.2
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 1.6e-08 63.2 63 42.9
THA.LOC104808672 Tarenaya hassleriana HOM05D010750 ORTHO05D005686 1.6e-08 63.2 43 53.5
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 1.6e-08 63.2 80 38.8
C03p76940 Brassica napus HOM05D010750 ORTHO05D005686 2.1e-08 62.8 39 59.0
Carub.0007s2819 Capsella rubella HOM05D010750 ORTHO05D005686 2.1e-08 62.8 60 45.0
BolC4t25741H Brassica oleracea HOM05D010750 ORTHO05D005686 2.7e-08 62.4 39 61.5
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.7e-08 62.4 41 56.1
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 2.7e-08 62.4 60 45.0
BcaC01g00210 Brassica carinata HOM05D010750 ORTHO05D005686 3.5e-08 62.0 53 45.3
BolC3t19949H Brassica oleracea HOM05D010750 ORTHO05D005686 3.5e-08 62.0 53 45.3
Prupe.1G170500 Prunus persica HOM05D005839 ORTHO05D005686 3.5e-08 62.0 68 38.2
AUR62018535 Chenopodium quinoa HOM05D005839 ORTHO05D005686 6.0e-08 61.2 62 40.3
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 7.8e-08 60.8 90 36.7
Ciclev10004236m.g Citrus clementina HOM05D005839 ORTHO05D005686 1.0e-07 60.5 62 43.5
Hund24442 Selenicereus undatus HOM05D005839 ORTHO05D005686 1.0e-07 60.5 82 35.4
arahy.Tifrunner.gnm1.ann1.CIA2YT Arachis hypogaea HOM05D005839 ORTHO05D005686 1.3e-07 60.1 64 43.8
AT4G14200 Arabidopsis thaliana HOM05D010750 ORTHO05D005686 3.0e-07 58.9 53 45.3
PGR083G0592 Punica granatum HOM05D005839 ORTHO05D005686 3.0e-07 58.9 95 35.8
SMO153G0001 Selaginella moellendorffii HOM05D005839 ORTHO05D005686 3.0e-07 58.9 69 42.0
Lalb_Chr07g0186961 Lupinus albus HOM05D005839 ORTHO05D005686 3.9e-07 58.5 35 62.9
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 5.1e-07 58.2 69 37.7
Mapoly0008s0012 Marchantia polymorpha HOM05D005839 ORTHO05D005686 5.1e-07 58.2 43 53.5
BcaNung05575 Brassica carinata HOM05D010750 ORTHO05D005686 6.6e-07 57.8 67 37.3
HanXRQChr02g0058441 Helianthus annuus HOM05D005839 ORTHO05D005686 1.5e-06 56.6 49 51.0
Lsat_1_v5_gn_2_47881 Lactuca sativa HOM05D005839 ORTHO05D005686 1.5e-06 56.6 51 51.0
Nn1g08130 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.5e-06 56.6 78 38.5
Nn8g41260 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.5e-06 56.6 95 31.6
CANSAT78G1593 Cannabis sativa HOM05D005839 ORTHO05D005686 2.5e-06 55.8 73 37.0
Cpa.g.sc157.18 Carica papaya HOM05D005839 ORTHO05D005686 3.3e-06 55.5 63 34.9
PSO017G5422 Papaver somniferum HOM05D037519 ORTHO05D037279 4.3e-06 55.1 49 42.9
PSO063G0130 Papaver somniferum HOM05D037519 ORTHO05D037279 5.6e-06 54.7 49 46.9
QL06p027203 Quercus lobata HOM05D034196 ORTHO05D005686 5.6e-06 54.7 38 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2400 Anthoceros agrestis HOM05D010750 ORTHO05D005686 9.5e-06 53.9 53 45.3
Cpa.g.sc157.15 Carica papaya HOM05D005839 ORTHO05D005686 9.5e-06 53.9 63 33.3


User provided reference genes

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