Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 3.1e-155 552.0 329 100.0
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 3.5e-146 521.9 329 95.1
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 2.0e-16 90.9 280 36.1
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 3.4e-16 90.1 336 33.9
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 7.5e-16 89.0 322 29.8
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.2e-15 87.4 95 46.3
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.9e-15 87.0 322 31.7
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 4.9e-15 86.3 324 38.6
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 8.3e-15 85.5 141 37.6
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.9e-14 84.3 89 46.1
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 4.1e-14 83.2 349 32.7
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 4.1e-14 83.2 275 29.5
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.2e-13 81.6 329 36.2
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 3.5e-13 80.1 338 34.3
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.5e-13 80.1 335 38.2
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 4.6e-13 79.7 288 34.7
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 4.6e-13 79.7 355 30.1
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 4.6e-13 79.7 343 23.3
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 4.6e-13 79.7 343 32.7
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 6.0e-13 79.3 320 30.9
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 7.8e-13 79.0 115 39.1
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 7.8e-13 79.0 312 32.7
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.0e-12 78.6 164 31.1
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.3e-12 78.2 302 33.8
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.3e-12 78.2 302 31.8
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.3e-12 78.2 371 37.5
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.7e-12 77.8 319 30.4
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 2.3e-12 77.4 333 34.2
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 2.3e-12 77.4 95 41.1
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 3.0e-12 77.0 95 42.1
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 3.0e-12 77.0 95 42.1
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 3.0e-12 77.0 302 31.8
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 3.9e-12 76.6 95 42.1
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.9e-12 76.6 282 39.0
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 5.1e-12 76.3 337 37.1
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 5.1e-12 76.3 319 34.5
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 6.6e-12 75.9 312 25.0
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 8.6e-12 75.5 69 50.7
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.1e-11 75.1 311 30.9
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.1e-11 75.1 311 32.8
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.1e-11 75.1 353 25.5
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.1e-11 75.1 317 25.6
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.5e-11 74.7 304 35.2
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 1.5e-11 74.7 329 33.4
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 2.5e-11 73.9 328 32.3
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 2.5e-11 73.9 328 32.3
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 3.3e-11 73.6 96 40.6
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 3.3e-11 73.6 69 49.3
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 4.3e-11 73.2 338 33.4
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 4.3e-11 73.2 69 49.3
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 4.3e-11 73.2 329 26.7
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.3e-11 73.2 102 38.2
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.3e-11 73.2 277 31.4
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 5.6e-11 72.8 308 34.1
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 7.3e-11 72.4 368 35.1
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 7.3e-11 72.4 97 41.2
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.2e-10 71.6 95 40.0
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.2e-10 71.6 92 40.2
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 2.8e-10 70.5 92 40.2
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.8e-10 70.5 273 32.2
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 2.8e-10 70.5 74 44.6
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 3.6e-10 70.1 254 31.5
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 3.6e-10 70.1 340 25.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 3.6e-10 70.1 288 34.4
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 3.6e-10 70.1 68 48.5
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 6.2e-10 69.3 166 31.3
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 6.2e-10 69.3 336 34.2
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 8.1e-10 68.9 325 31.4
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 8.1e-10 68.9 92 42.4
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.1e-09 68.6 329 32.8
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.1e-09 68.6 157 30.6
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 1.4e-09 68.2 108 35.2
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.4e-09 68.2 350 31.4
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 1.4e-09 68.2 79 41.8
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 1.4e-09 68.2 86 39.5
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.8e-09 67.8 261 39.8
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.8e-09 67.8 124 33.1
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 1.8e-09 67.8 331 30.2
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.8e-09 67.8 327 32.4
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.8e-09 67.8 298 26.5
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 2.3e-09 67.4 109 32.1
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 3.1e-09 67.0 97 35.1
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 3.1e-09 67.0 346 32.7
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 3.1e-09 67.0 293 25.6
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 4.0e-09 66.6 262 30.5
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 4.0e-09 66.6 108 35.2
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 4.0e-09 66.6 97 37.1
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 5.2e-09 66.2 96 37.5
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 5.2e-09 66.2 86 39.5
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 5.2e-09 66.2 293 25.6
SEGI_24387 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 5.2e-09 66.2 135 37.0
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 6.8e-09 65.9 328 32.0
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 8.9e-09 65.5 330 26.7
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 8.9e-09 65.5 290 25.5
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.2e-08 65.1 348 31.6
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.5e-08 64.7 280 26.1
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.5e-08 64.7 89 37.1
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.0e-08 64.3 57 50.9
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 2.0e-08 64.3 89 36.0
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 2.0e-08 64.3 337 31.2
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 2.0e-08 64.3 87 37.9
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.0e-08 64.3 87 41.4
AagrBONN_evm.TU.Sc2ySwM_368.3264 Anthoceros agrestis HOM05D029403 ORTHO05D006930 2.6e-08 63.9 143 31.5
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 3.4e-08 63.5 55 52.7
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 4.4e-08 63.2 114 36.0
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 9.9e-08 62.0 59 47.5
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 9.9e-08 62.0 76 40.8
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 2.2e-07 60.8 312 34.6
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 2.2e-07 60.8 342 32.7
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 2.2e-07 60.8 369 30.9
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.2e-07 60.8 279 32.3
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 3.7e-07 60.1 58 48.3
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 3.7e-07 60.1 370 30.8
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.9e-07 59.7 279 39.4
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 6.4e-07 59.3 82 37.8
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 1.4e-06 58.2 108 34.3
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 1.4e-06 58.2 355 31.8
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 4.1e-06 56.6 94 34.0
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 9.2e-06 55.5 54 46.3


User provided reference genes

Program Settings