Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24216 Sequoiadendron giganteum HOM05D051108 ORTHO05D011908 4.6e-88 328.9 240 100.0
SEGI_07878 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.1e-44 181.8 165 66.7
SEGI_39891 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.1e-28 131.7 157 57.3
SEGI_31982 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.0e-26 125.2 192 44.8
SEGI_22325 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.5e-22 111.3 188 38.3
SEGI_38663 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.5e-22 111.3 188 42.6
SEGI_25326 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.6e-22 110.5 129 48.8
SEGI_16220 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.5e-22 109.0 155 45.8
SEGI_13181 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.0e-20 102.4 166 46.4
SEGI_22504 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.3e-17 93.6 153 39.9
SEGI_05400 Sequoiadendron giganteum HOM05D000002 ORTHO05D011908 6.1e-16 89.4 190 36.8
SEGI_02883 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.0e-16 89.0 188 36.2
SEGI_04932 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.9e-15 85.5 93 55.9
SEGI_01075 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 4.4e-14 83.2 153 37.9
SEGI_22638 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.2e-13 80.9 93 52.7
SEGI_05036 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 4.9e-13 79.7 154 34.4
SEGI_33735 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 4.9e-13 79.7 152 36.2
SEGI_34273 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 4.9e-13 79.7 120 40.0
SEGI_27814 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.0e-12 75.9 152 32.9
SEGI_31536 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 7.0e-12 75.9 122 41.8
Duzib093G1565 Durio zibethinus HOM05D000071 ORTHO05D003524 1.6e-11 74.7 127 35.4
MBI11_g13132_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D003524 7.8e-11 72.4 147 34.0
SEGI_06049 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 7.8e-11 72.4 152 32.2
SEGI_27904 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 7.8e-11 72.4 152 32.2
Gohir.A02G068202 Gossypium hirsutum HOM05D000071 ORTHO05D003524 6.6e-10 69.3 129 35.7
CAN.G1954.6 Capsicum annuum HOM05D000071 ORTHO05D003524 1.1e-09 68.6 145 33.8
SEGI_12792 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.1e-09 68.6 163 61.3
Solyc05g055190.1 Solanum lycopersicum HOM05D000071 ORTHO05D003524 1.1e-09 68.6 135 31.1
PSO170G1222 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-09 68.2 152 32.2
PSO170G6880 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-09 68.2 137 33.6
SEGI_33040 Sequoiadendron giganteum HOM05D000004 ORTHO05D011908 5.6e-09 66.2 153 34.6
CSS0024140 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D003524 7.3e-09 65.9 128 32.8
PSO063G7642 Papaver somniferum HOM05D000071 ORTHO05D003524 7.3e-09 65.9 140 33.6
Dinv12034 Davidia involucrata HOM05D000071 ORTHO05D003524 9.5e-09 65.5 151 33.1
PSO063G3288 Papaver somniferum HOM05D000071 ORTHO05D003524 9.5e-09 65.5 147 34.7
PGSC0003DMG400023498 Solanum tuberosum HOM05D000071 ORTHO05D003524 9.5e-09 65.5 135 31.9
COL.COLO4_15211 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.2e-08 65.1 153 30.7
Peaxi162Scf00519g00043 Petunia axillaris HOM05D000071 ORTHO05D003524 1.2e-08 65.1 135 31.1
Sopen05g033620 Solanum pennellii HOM05D000071 ORTHO05D003524 1.2e-08 65.1 135 31.1
CAN.G1433.15 Capsicum annuum HOM05D000071 ORTHO05D003524 1.6e-08 64.7 133 32.3
CSS0045032 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D003524 2.1e-08 64.3 121 33.1
CAN.G1433.8 Capsicum annuum HOM05D000071 ORTHO05D003524 2.1e-08 64.3 128 32.0
CAN.G1954.5 Capsicum annuum HOM05D000071 ORTHO05D003524 2.1e-08 64.3 128 32.0
Lj3g0000350 Lotus japonicus HOM05D000071 ORTHO05D000029 2.8e-08 63.9 99 32.3
SEGI_10182 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 2.8e-08 63.9 116 36.2
CSS0027137 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D003524 3.6e-08 63.5 150 31.3
CAN.G181.32 Capsicum annuum HOM05D000071 ORTHO05D003524 3.6e-08 63.5 128 31.2
Dinv01918 Davidia involucrata HOM05D000071 ORTHO05D003524 3.6e-08 63.5 109 37.6
MBI14_g34236_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D003524 3.6e-08 63.5 141 31.9
MBI14_g13657_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D003524 4.7e-08 63.2 154 32.5
Manes.15G086501 Manihot esculenta HOM05D000071 ORTHO05D003524 6.1e-08 62.8 127 33.9
PGSC0003DMG400023396 Solanum tuberosum HOM05D000071 ORTHO05D003524 6.1e-08 62.8 135 31.1
PSO063G4808 Papaver somniferum HOM05D000071 ORTHO05D003524 8.0e-08 62.4 152 31.6
SEGI_22282 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.0e-08 62.4 83 39.8
CAN.G1013.18 Capsicum annuum HOM05D000071 ORTHO05D003524 1.0e-07 62.0 133 31.6
Lj3A918G41 Lonicera japonica HOM05D000071 ORTHO05D003524 1.0e-07 62.0 135 31.9
SEGI_18838 Sequoiadendron giganteum HOM05D000053 ORTHO05D003524 1.4e-07 61.6 136 33.1
Medtr4g040360 Medicago truncatula HOM05D000071 ORTHO05D000029 2.3e-07 60.8 155 29.7
Prupe.1G575500 Prunus persica HOM05D000071 ORTHO05D000029 2.3e-07 60.8 161 31.1
CAN.G181.34 Capsicum annuum HOM05D000071 ORTHO05D003524 3.1e-07 60.5 89 36.0
Gohir.A02G127800 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.1e-07 60.5 138 30.4
Nitab4.5_0013659g0010 Nicotiana tabacum HOM05D000071 ORTHO05D003524 3.1e-07 60.5 133 30.8
PSO513G0203 Papaver somniferum HOM05D000071 ORTHO05D003524 3.1e-07 60.5 93 39.8
CsaV3_3G032000 Cucumis sativus L. HOM05D000071 ORTHO05D000029 4.0e-07 60.1 101 32.7
Gohir.D02G074400 Gossypium hirsutum HOM05D000071 ORTHO05D003524 4.0e-07 60.1 133 34.6
ATR0332G057 Amborella trichopoda HOM05D000071 ORTHO05D003524 5.2e-07 59.7 133 33.8
Dinv12020 Davidia involucrata HOM05D000071 ORTHO05D003524 5.2e-07 59.7 133 31.6
PSO339G2567 Papaver somniferum HOM05D000071 ORTHO05D003524 5.2e-07 59.7 125 32.0
PSO732G0467 Papaver somniferum HOM05D000071 ORTHO05D003524 5.2e-07 59.7 99 35.4
QL03p053807 Quercus lobata HOM05D000071 ORTHO05D000029 5.2e-07 59.7 118 35.6
Gorai.005G083800 Gossypium raimondii HOM05D000071 ORTHO05D003524 6.8e-07 59.3 133 33.1
PSO513G0115 Papaver somniferum HOM05D000071 ORTHO05D003524 6.8e-07 59.3 117 35.9
TPR.G30164 Trifolium pratense HOM05D000071 ORTHO05D000029 6.8e-07 59.3 156 30.8
MELO3C023993.2 Cucumis melo HOM05D000071 ORTHO05D000029 8.9e-07 58.9 101 31.7
Duzib138G1125 Durio zibethinus HOM05D000053 ORTHO05D000035 8.9e-07 58.9 117 37.6
SEGI_32314 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 8.9e-07 58.9 125 36.0
ATR0709G014 Amborella trichopoda HOM05D000071 ORTHO05D000029 1.2e-06 58.5 129 31.8
Gorai.001G203400 Gossypium raimondii HOM05D000053 ORTHO05D000035 1.2e-06 58.5 127 33.9
PSO151G0118 Papaver somniferum HOM05D000071 ORTHO05D003524 1.2e-06 58.5 133 30.1
GSVIVG01037280001 Vitis vinifera HOM05D000071 ORTHO05D003524 1.2e-06 58.5 96 38.5
CANSAT80G2471 Cannabis sativa HOM05D000071 ORTHO05D000029 1.5e-06 58.2 151 28.5
MBI17_g43544_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 1.5e-06 58.2 86 38.4
Oeu049482.1 Olea europaea HOM05D000071 ORTHO05D000029 1.5e-06 58.2 193 28.0
PSO063G6116 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-06 58.2 142 31.0
PSO782G2967 Papaver somniferum HOM05D000071 ORTHO05D003524 1.5e-06 58.2 87 37.9
CAN.G181.35 Capsicum annuum HOM05D000071 ORTHO05D003524 2.0e-06 57.8 135 28.9
QL03p053878 Quercus lobata HOM05D000071 ORTHO05D000029 2.0e-06 57.8 118 36.4
SEGI_17770 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.0e-06 57.8 65 43.1
Eucgr.K00646 Eucalyptus grandis HOM05D000053 ORTHO05D000035 2.6e-06 57.4 125 32.0
Nitab4.5_0000687g0240 Nicotiana tabacum HOM05D000071 ORTHO05D003524 3.4e-06 57.0 135 29.6
PSO339G4999 Papaver somniferum HOM05D000071 ORTHO05D003524 3.4e-06 57.0 125 33.6
Eucgr.K00632 Eucalyptus grandis HOM05D000053 ORTHO05D000035 4.4e-06 56.6 125 32.8
Gohir.A01G054700 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.4e-06 56.6 96 36.5
Gohir.D07G183000 Gossypium hirsutum HOM05D000053 ORTHO05D000035 4.4e-06 56.6 125 33.6
MBI17_g44729_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 4.4e-06 56.6 117 31.6
PSO513G0187 Papaver somniferum HOM05D000071 ORTHO05D003524 4.4e-06 56.6 93 37.6
PSO566G0174 Papaver somniferum HOM05D000071 ORTHO05D003524 4.4e-06 56.6 87 36.8
Thecc.05G218400 Theobroma cacao HOM05D000071 ORTHO05D000029 4.4e-06 56.6 148 29.7
TWI59G0828 Tripterygium wilfordii HOM05D000053 ORTHO05D000035 4.4e-06 56.6 124 35.5
Lsat_1_v5_gn_1_103040 Lactuca sativa HOM05D000071 ORTHO05D000029 5.8e-06 56.2 89 36.0
SEGI_04259 Sequoiadendron giganteum HOM05D000053 ORTHO05D012301 5.8e-06 56.2 107 37.4
Thecc.04G141000 Theobroma cacao HOM05D000053 ORTHO05D000035 5.8e-06 56.2 121 32.2
CiPaw.04G193100 Carya illinoinensis HOM05D000053 ORTHO05D000035 7.5e-06 55.8 117 29.9
Duzib138G0208 Durio zibethinus HOM05D000053 ORTHO05D000035 7.5e-06 55.8 128 32.8
Eucgr.F00560 Eucalyptus grandis HOM05D000053 ORTHO05D000035 7.5e-06 55.8 94 39.4
Medtr8g469690 Medicago truncatula HOM05D015984 ORTHO05D015166 7.5e-06 55.8 101 35.6
PSO513G0087 Papaver somniferum HOM05D000071 ORTHO05D003524 7.5e-06 55.8 126 32.5
Thecc.10G139800 Theobroma cacao HOM05D000053 ORTHO05D000035 7.5e-06 55.8 121 31.4
vmacro06853 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 7.5e-06 55.8 143 30.8
ATR0618G168 Amborella trichopoda HOM05D000053 ORTHO05D000448 9.8e-06 55.5 152 28.3
ATR0665G210 Amborella trichopoda HOM05D000071 ORTHO05D003524 9.8e-06 55.5 131 33.6
PSO423G0132 Papaver somniferum HOM05D000071 ORTHO05D003524 9.8e-06 55.5 133 29.3


User provided reference genes

Program Settings