Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24191 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.3e-231 804.7 399 100.0
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-169 600.1 424 73.1
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.6e-148 529.3 310 85.8
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.5e-146 521.5 310 84.5
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.8e-141 506.5 324 79.6
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.5e-139 498.0 310 80.6
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.0e-135 486.5 287 85.0
SEGI_21011 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.4e-135 485.7 324 76.5
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-129 467.2 321 74.8
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.1e-129 464.9 321 74.5
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-128 464.2 321 74.5
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-128 464.2 321 74.1
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-128 464.2 307 76.5
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.8e-128 463.4 307 76.2
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.8e-128 463.4 307 76.2
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.5e-127 458.0 321 73.5
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.8e-127 457.6 307 75.6
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.8e-119 431.0 292 75.3
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.1e-117 425.6 283 77.0
SEGI_12977 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.0e-112 409.1 291 72.9
SEGI_39857 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.6e-82 308.9 198 78.8
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.4e-70 268.9 189 73.5
SEGI_24051 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.1e-65 251.9 163 76.1
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.1e-59 232.6 264 48.1
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-42 178.3 201 46.8
SEGI_40659 Sequoiadendron giganteum HOM05D000044 ORTHO05D006634 2.0e-39 167.5 175 50.3
SEGI_29479 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-38 165.2 176 50.0
SEGI_22032 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-38 164.9 112 73.2
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 2.5e-37 160.6 326 35.9
SEGI_04345 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.5e-37 159.5 90 82.2
SEGI_17638 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-31 141.4 152 48.0
SEGI_15588 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.6e-31 140.6 154 47.4
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 1.7e-30 137.9 318 32.7
SEGI_06980 Sequoiadendron giganteum HOM05D007914 ORTHO05D020962 2.2e-30 137.5 90 70.0
SEGI_07585 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-29 135.2 174 46.6
SEGI_24050 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.7e-27 125.9 133 50.4
SEGI_00079 Sequoiadendron giganteum HOM05D000773 ORTHO05D000588 6.3e-25 119.4 203 38.4
SEGI_34863 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.0e-22 109.8 188 40.4
SEGI_12989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-21 108.2 109 50.5
PSO675G2703 Papaver somniferum HOM05D007914 ORTHO05D006902 1.6e-20 104.8 217 35.0
SEGI_20543 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.7e-20 103.2 115 46.1
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 8.0e-20 102.4 279 29.4
SEGI_20253 Sequoiadendron giganteum HOM05D007914 ORTHO05D385873 3.0e-19 100.5 55 83.6
SEGI_08534 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 6.8e-19 99.4 120 45.0
SEGI_00547 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.8e-19 99.0 55 78.2
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 2.2e-17 94.4 306 29.7
Cc05_g09210 Coffea canephora HOM05D008038 ORTHO05D006902 2.2e-17 94.4 297 29.6
SEGI_11065 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.2e-17 94.4 146 39.0
SEGI_10716 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-17 93.2 55 74.5
Lj6g0001787 Lotus japonicus HOM05D008038 ORTHO05D006902 6.3e-17 92.8 281 30.2
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 6.3e-17 92.8 307 28.3
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 5.4e-16 89.7 283 27.6
FvH4_6g37811 Fragaria vesca HOM05D008038 ORTHO05D006902 1.2e-15 88.6 279 28.3
SEGI_04810 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 2.7e-15 87.4 296 27.4
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 3.5e-15 87.0 323 28.8
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 4.5e-15 86.7 283 27.9
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 4.5e-15 86.7 286 28.7
SEGI_08593 Sequoiadendron giganteum HOM05D000074 ORTHO05D001793 4.5e-15 86.7 132 38.6
Eucgr.K01193 Eucalyptus grandis HOM05D008038 ORTHO05D006902 5.9e-15 86.3 282 26.6
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 5.9e-15 86.3 286 28.0
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 1.0e-14 85.5 306 28.8
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 1.0e-14 85.5 292 28.4
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 1.3e-14 85.1 289 27.3
Thecc.01G159700 Theobroma cacao HOM05D008038 ORTHO05D006902 1.3e-14 85.1 281 27.4
Rhsim06G0121400 Rhododendron simsii HOM05D008038 ORTHO05D006902 2.2e-14 84.3 286 29.4
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 2.9e-14 84.0 283 29.0
CiPaw.04G110800 Carya illinoinensis HOM05D008038 ORTHO05D006902 3.8e-14 83.6 281 26.7
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 5.0e-14 83.2 286 28.7
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 6.5e-14 82.8 288 28.1
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 3.2e-13 80.5 285 27.7
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 4.2e-13 80.1 282 28.4
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 4.2e-13 80.1 287 27.2
Sc10g0010300 Simmondsia chinensis HOM05D008038 ORTHO05D006902 4.2e-13 80.1 276 28.3
Oeu026475.1 Olea europaea HOM05D008038 ORTHO05D006902 1.2e-12 78.6 286 28.0
SEGI_39030 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.2e-12 78.6 286 26.9
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 2.1e-12 77.8 281 26.7
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 2.1e-12 77.8 286 26.2
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 2.7e-12 77.4 288 27.4
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 3.6e-12 77.0 290 28.3
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 4.7e-12 76.6 282 26.2
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 4.7e-12 76.6 285 27.7
unitig_899.g15335 Utricularia gibba HOM05D008038 ORTHO05D006902 4.7e-12 76.6 317 26.5
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 6.1e-12 76.3 283 26.5
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 6.1e-12 76.3 289 29.8
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 6.1e-12 76.3 284 26.8
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 6.1e-12 76.3 288 27.4
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 8.0e-12 75.9 281 27.0
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 1.0e-11 75.5 302 26.8
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 1.0e-11 75.5 288 27.4
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.4e-11 75.1 289 26.0
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 1.8e-11 74.7 285 27.7
AagrBONN_evm.TU.Sc2ySwM_368.536 Anthoceros agrestis HOM05D008038 ORTHO05D006902 4.0e-11 73.6 289 26.3
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 6.8e-11 72.8 297 27.6
Haze_15932 Corylus avellana HOM05D008038 ORTHO05D006902 8.8e-11 72.4 286 26.2
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 1.5e-10 71.6 281 28.5
SEGI_11812 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.4e-10 70.5 90 44.4
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 1.7e-09 68.2 293 23.2
SEGI_12776 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.7e-09 68.2 62 53.2
SEGI_01490 Sequoiadendron giganteum HOM05D000526 ORTHO05D000956 2.8e-09 67.4 59 55.9
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 4.9e-09 66.6 291 27.8
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 4.9e-09 66.6 291 25.4
SEGI_00994 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-08 65.5 90 42.2
SEGI_29502 Sequoiadendron giganteum HOM05D007914 ORTHO05D386443 1.4e-08 65.1 69 49.3
SEGI_32170 Sequoiadendron giganteum HOM05D007914 ORTHO05D386149 5.4e-08 63.2 92 42.4
PSO541G1774 Papaver somniferum HOM05D007914 ORTHO05D006902 2.0e-07 61.2 82 39.0
SEGI_40132 Sequoiadendron giganteum HOM05D007914 ORTHO05D010437 3.5e-07 60.5 92 42.4
SEGI_40854 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.9e-07 59.7 78 47.4
SEGI_11783 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.3e-06 58.5 63 47.6
CANSAT64G2812 Cannabis sativa HOM05D008038 ORTHO05D006902 2.3e-06 57.8 335 24.2
SEGI_29989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.3e-06 57.8 60 51.7
SEGI_04423 Sequoiadendron giganteum HOM05D000090 ORTHO05D000658 5.0e-06 56.6 79 39.2


User provided reference genes

Program Settings