Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00639 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.7e-105 386.0 190 100.0
SEGI_24189 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.7e-105 386.0 190 100.0
SEGI_29096 Sequoiadendron giganteum HOM05D007260 ORTHO05D009149 1.7e-105 386.0 190 100.0
CiPaw.10G035100 Carya illinoinensis HOM05D007260 ORTHO05D009149 2.8e-23 112.8 133 44.4
Cfa016789 Carpinus fangiana HOM05D007260 ORTHO05D009149 3.7e-23 112.5 133 45.9
Haze_19810 Corylus avellana HOM05D007260 ORTHO05D009149 4.8e-23 112.1 134 44.8
Haze_19813 Corylus avellana HOM05D007260 ORTHO05D009149 4.8e-23 112.1 134 44.8
Nn2g15147 Nelumbo nucifera HOM05D007260 ORTHO05D009149 4.8e-23 112.1 133 47.4
TWI74G0992 Tripterygium wilfordii HOM05D007260 ORTHO05D009149 8.2e-23 111.3 133 47.4
Actinidia39206 Actinidia chinensis HOM05D007260 ORTHO05D009149 1.4e-22 110.5 138 44.2
Phvul.008G158118 Phaseolus vulgaris HOM05D007260 ORTHO05D009149 1.4e-22 110.5 133 43.6
Sed0015422 Sechium edule HOM05D007260 ORTHO05D009149 1.8e-22 110.2 133 44.4
QL07p003043 Quercus lobata HOM05D007260 ORTHO05D009149 9.0e-22 107.8 133 42.9
TAR633G2662 Trochodendron aralioides HOM05D007260 ORTHO05D009149 2.6e-21 106.3 134 47.0
vmacro21973 Vaccinium macrocarpon HOM05D007260 ORTHO05D009149 5.9e-21 105.1 132 44.7
CsaV3_6G012930 Cucumis sativus L. HOM05D007260 ORTHO05D009149 1.3e-20 104.0 133 42.1
VMungo1309G2091 Vigna mungo HOM05D007260 ORTHO05D009149 1.3e-20 104.0 133 42.1
GSVIVG01033239001 Vitis vinifera HOM05D007260 ORTHO05D009149 1.3e-20 104.0 134 42.5
MD14G1076800 Malus domestica HOM05D007260 ORTHO05D009149 1.7e-20 103.6 135 44.4
ClCG04G003650 Citrullus lanatus HOM05D007260 ORTHO05D009149 5.0e-20 102.1 134 41.8
Eucgr.K01719 Eucalyptus grandis HOM05D007260 ORTHO05D009149 5.0e-20 102.1 142 42.3
Ah.13g076600 Amaranthus hybridus HOM05D007260 ORTHO05D009149 1.9e-19 100.1 142 43.7
Medtr7g091050 Medicago truncatula HOM05D007260 ORTHO05D009149 1.9e-19 100.1 133 44.4
Ciclev10005732m.g Citrus clementina HOM05D007260 ORTHO05D009149 5.5e-19 98.6 156 39.7
Duzib106G0310 Durio zibethinus HOM05D007260 ORTHO05D009149 5.5e-19 98.6 133 42.9
Eucgr.K02009 Eucalyptus grandis HOM05D007260 ORTHO05D009149 7.2e-19 98.2 142 42.3
RcHm_v2.0_Chr3g0483391 Rosa chinensis HOM05D007260 ORTHO05D009149 7.2e-19 98.2 136 41.9
Sabra06G0031900 Salix brachista HOM05D007260 ORTHO05D009149 7.2e-19 98.2 135 41.5
AUR62026087 Chenopodium quinoa HOM05D007260 ORTHO05D009149 9.4e-19 97.8 131 43.5
Potri.006G046350 Populus trichocarpa HOM05D007260 ORTHO05D009149 9.4e-19 97.8 131 42.0
ATR0188G026 Amborella trichopoda HOM05D007260 ORTHO05D009149 1.2e-18 97.4 132 40.2
PSO782G2785 Papaver somniferum HOM05D007260 ORTHO05D009149 1.2e-18 97.4 141 39.7
CANSAT80G0389 Cannabis sativa HOM05D007260 ORTHO05D009149 1.6e-18 97.1 138 41.3
CANSAT80G1528 Cannabis sativa HOM05D007260 ORTHO05D009149 1.6e-18 97.1 138 41.3
Glyma.03G134300 Glycine max HOM05D007260 ORTHO05D009149 1.6e-18 97.1 134 40.3
AUR62024501 Chenopodium quinoa HOM05D007260 ORTHO05D009149 2.7e-18 96.3 131 42.7
MBI13_g10219_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 2.7e-18 96.3 129 42.6
EL10Ac3g07131 Beta vulgaris HOM05D007260 ORTHO05D009149 3.6e-18 95.9 142 42.3
Glyma.19G136500 Glycine max HOM05D007260 ORTHO05D009149 4.6e-18 95.5 134 38.8
SalBow6G2074 Salvia bowleyana HOM05D007260 ORTHO05D009149 7.9e-18 94.7 134 40.3
Thecc.05G151300 Theobroma cacao HOM05D007260 ORTHO05D009149 7.9e-18 94.7 134 42.5
SalBow6G0663 Salvia bowleyana HOM05D007260 ORTHO05D009149 1.4e-17 94.0 134 40.3
Ca_08430_v3 Cicer arietinum L. HOM05D007260 ORTHO05D009149 1.8e-17 93.6 133 40.6
Cc06_g17880 Coffea canephora HOM05D007260 ORTHO05D009149 1.8e-17 93.6 135 42.2
MBI13_g36811_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 2.3e-17 93.2 132 43.9
Prupe.7G054700 Prunus persica HOM05D007260 ORTHO05D009149 2.3e-17 93.2 135 41.5
Hund19138 Selenicereus undatus HOM05D007260 ORTHO05D009149 2.3e-17 93.2 133 39.8
Atru.chr1.1150 Acer truncatum HOM05D007260 ORTHO05D009149 3.0e-17 92.8 133 38.3
Gohir.A02G107109 Gossypium hirsutum HOM05D007260 ORTHO05D009149 3.0e-17 92.8 134 41.8
Gorai.003G087400 Gossypium raimondii HOM05D007260 ORTHO05D009149 3.0e-17 92.8 134 41.8
Lj1g0013385 Lotus japonicus HOM05D007260 ORTHO05D009149 3.0e-17 92.8 135 40.0
COL.COLO4_22299 Corchorus olitorius HOM05D007260 ORTHO05D009149 3.9e-17 92.4 142 41.5
ECA248G0818 Erigeron canadensis HOM05D007260 ORTHO05D009149 3.9e-17 92.4 135 40.0
Gohir.D03G072400 Gossypium hirsutum HOM05D007260 ORTHO05D009149 3.9e-17 92.4 134 41.8
Hma1.2p1_0110F.1_g052790 Hydrangea macrophylla HOM05D007260 ORTHO05D009149 5.1e-17 92.0 114 45.6
Lalb_Chr01g0017381 Lupinus albus HOM05D007260 ORTHO05D009149 5.1e-17 92.0 132 40.2
arahy.Tifrunner.gnm1.ann1.HX298U Arachis hypogaea HOM05D007260 ORTHO05D009149 1.1e-16 90.9 134 40.3
Lj1C1126T6 Lonicera japonica HOM05D007260 ORTHO05D009149 1.1e-16 90.9 131 41.2
Oeu023130.1 Olea europaea HOM05D007260 ORTHO05D009149 1.1e-16 90.9 131 41.2
Sc25g0005370 Simmondsia chinensis HOM05D007260 ORTHO05D009149 1.1e-16 90.9 139 38.8
Migut.J01731 Erythranthe guttata HOM05D007260 ORTHO05D009149 1.5e-16 90.5 134 39.6
Psat3g074400 Pisum sativum HOM05D007260 ORTHO05D009149 1.5e-16 90.5 133 42.1
arahy.Tifrunner.gnm1.ann1.QMP5TS Arachis hypogaea HOM05D007260 ORTHO05D009149 2.0e-16 90.1 134 39.6
Peaxi162Scf00130g00720 Petunia axillaris HOM05D007260 ORTHO05D009149 2.5e-16 89.7 134 40.3
SGA_v2.0_scaffold105G30380 Striga asiatica HOM05D007260 ORTHO05D009149 2.5e-16 89.7 131 40.5
THA.LOC104802057 Tarenaya hassleriana HOM05D007260 ORTHO05D009149 2.5e-16 89.7 146 41.8
Cpa.g.sc182.9 Carica papaya HOM05D007260 ORTHO05D009149 5.7e-16 88.6 134 40.3
FAN02G1162 Fragaria x ananassa HOM05D007260 ORTHO05D009149 5.7e-16 88.6 138 38.4
Manes.09G018400 Manihot esculenta HOM05D007260 ORTHO05D009149 7.4e-16 88.2 132 41.7
Aqoxy1G00296 Aquilegia oxysepala HOM05D007260 ORTHO05D009149 1.3e-15 87.4 166 38.0
FvH4_6g24410 Fragaria vesca HOM05D007260 ORTHO05D009149 2.8e-15 86.3 137 40.1
TPR.G18237 Trifolium pratense HOM05D007260 ORTHO05D009149 2.8e-15 86.3 134 40.3
Lsat_1_v5_gn_5_160501 Lactuca sativa HOM05D007260 ORTHO05D009149 4.8e-15 85.5 133 40.6
Nitab4.5_0000826g0300 Nicotiana tabacum HOM05D007260 ORTHO05D009149 4.8e-15 85.5 136 37.5
DCAR_020507 Daucus carota HOM05D007260 ORTHO05D009149 6.3e-15 85.1 104 46.2
Nitab4.5_0006870g0020 Nicotiana tabacum HOM05D007260 ORTHO05D009149 6.3e-15 85.1 136 39.0
Carub.0004s2386 Capsella rubella HOM05D007260 ORTHO05D009149 1.4e-14 84.0 136 37.5
CARHR136700 Cardamine hirsuta HOM05D007260 ORTHO05D009149 1.4e-14 84.0 146 38.4
Lj1P1128T41 Lonicera japonica HOM05D007260 ORTHO05D009149 1.4e-14 84.0 113 43.4
PGSC0003DMG401012695 Solanum tuberosum HOM05D007260 ORTHO05D009149 1.4e-14 84.0 136 41.2
Rhsim03G0028400 Rhododendron simsii HOM05D007260 ORTHO05D009149 3.1e-14 82.8 159 34.6
Aa31LG1G23620 Aethionema arabicum HOM05D007260 ORTHO05D009149 4.1e-14 82.4 145 36.6
MSTRG.19844 Avicennia marina HOM05D007260 ORTHO05D009149 1.2e-13 80.9 133 37.6
Thhalv10017244m.g Eutrema salsugineum HOM05D007260 ORTHO05D009149 3.4e-13 79.3 140 36.4
AL4G39670 Arabidopsis lyrata HOM05D007260 ORTHO05D009149 7.7e-13 78.2 131 35.1
AT2G41600 Arabidopsis thaliana HOM05D007260 ORTHO05D009149 1.0e-12 77.8 135 34.8
BcaB06g29191 Brassica carinata HOM05D007260 ORTHO05D009149 1.3e-12 77.4 140 36.4
MBI13_g37004_MAGBIO Magnolia biondii HOM05D007260 ORTHO05D009149 1.3e-12 77.4 105 43.8
Sp4g23850 Schrenkiella parvula HOM05D007260 ORTHO05D009149 1.3e-12 77.4 117 39.3
CAN.G676.12 Capsicum annuum HOM05D007260 ORTHO05D009149 5.0e-12 75.5 131 38.2
HanXRQChr13g0396001 Helianthus annuus HOM05D007260 ORTHO05D009149 6.5e-12 75.1 107 43.0
Solyc04g016250.3 Solanum lycopersicum HOM05D007260 ORTHO05D009149 7.2e-11 71.6 129 37.2
BcaC02g07303 Brassica carinata HOM05D007260 ORTHO05D009149 2.7e-10 69.7 140 33.6
BolC4t28410H Brassica oleracea HOM05D007260 ORTHO05D009149 2.7e-10 69.7 140 33.6
Sopen04g008360 Solanum pennellii HOM05D007260 ORTHO05D009149 2.7e-10 69.7 131 36.6
Zm00001eb405200 Zea mays HOM05D007260 ORTHO05D009149 2.7e-10 69.7 145 33.1
C04p69130 Brassica napus HOM05D007260 ORTHO05D009149 4.7e-10 68.9 140 33.6
BraA04t18628Z Brassica rapa HOM05D007260 ORTHO05D009149 6.1e-10 68.6 139 33.1
A04p31710 Brassica napus HOM05D007260 ORTHO05D009149 7.9e-10 68.2 139 32.4
MELO3C013619.2 Cucumis melo HOM05D007260 ORTHO05D009149 7.9e-10 68.2 79 43.0
Dinv02794 Davidia involucrata HOM05D007260 ORTHO05D009149 1.0e-09 67.8 84 47.6
Os12g0136600 Oryza sativa ssp. japonica HOM05D007260 ORTHO05D009149 8.8e-09 64.7 104 34.6
Os11g0140100 Oryza sativa ssp. japonica HOM05D007260 ORTHO05D009149 1.1e-08 64.3 149 31.5
PSO063G4612 Papaver somniferum HOM05D007260 ORTHO05D009149 1.5e-08 63.9 204 26.5
Pp3c12_23320 Physcomitrium patens HOM05D001009 ORTHO05D000829 3.7e-07 59.3 137 31.4
CDE04G0457 Ceratophyllum demersum HOM05D007260 ORTHO05D009149 2.4e-06 56.6 133 30.8


User provided reference genes

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