Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24169 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 1.3e-76 289.7 146 100.0
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 6.7e-41 171.0 91 94.5
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.7e-28 129.8 91 72.5
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.2e-28 129.4 91 72.5
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 3.2e-27 125.6 91 68.1
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 8.8e-25 117.5 91 62.6
PSO210G6259 Papaver somniferum HOM05D002969 ORTHO05D003308 4.4e-24 115.2 91 61.5
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 4.4e-24 115.2 91 61.5
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 7.4e-24 114.4 91 60.4
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 5.9e-21 104.8 91 56.0
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 5.9e-21 104.8 91 56.0
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 1.7e-20 103.2 91 54.9
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 1.7e-20 103.2 90 54.4
PSO017G1278 Papaver somniferum HOM05D002969 ORTHO05D003308 3.8e-20 102.1 89 55.1
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 1.1e-19 100.5 91 56.0
CSS0047313 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 4.2e-19 98.6 91 54.9
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 5.5e-19 98.2 91 51.6
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 7.2e-19 97.8 91 51.6
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.4e-17 93.6 91 54.9
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 1.4e-17 93.6 91 53.8
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 1.5e-16 90.1 91 50.5
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 3.3e-16 89.0 91 54.9
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 5.7e-16 88.2 81 53.1
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 1.7e-15 86.7 90 50.0
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 6.3e-15 84.7 87 52.9
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 2.4e-14 82.8 106 45.3
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 5.3e-14 81.6 91 47.3
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 5.3e-14 81.6 91 45.1
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 7.0e-14 81.3 101 43.6
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 9.1e-14 80.9 91 47.3
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 1.6e-13 80.1 84 47.6
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 1.6e-13 80.1 84 47.6
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 2.0e-13 79.7 84 47.6
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 2.6e-13 79.3 75 49.3
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 2.6e-13 79.3 84 46.4
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 2.6e-13 79.3 84 47.6
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 2.6e-13 79.3 87 48.3
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 3.5e-13 79.0 87 46.0
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 3.5e-13 79.0 90 45.6
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 7.7e-13 77.8 90 47.8
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 1.0e-12 77.4 84 46.4
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 1.0e-12 77.4 84 46.4
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.3e-12 77.0 91 45.1
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 1.7e-12 76.6 87 44.8
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 2.2e-12 76.3 91 45.1
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 2.2e-12 76.3 75 48.0
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 2.2e-12 76.3 75 49.3
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 2.2e-12 76.3 75 48.0
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 2.2e-12 76.3 78 48.7
vmacro15025 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 2.2e-12 76.3 50 70.0
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 3.8e-12 75.5 108 42.6
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 3.8e-12 75.5 75 48.0
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 3.8e-12 75.5 85 44.7
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 5.0e-12 75.1 106 40.6
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 6.5e-12 74.7 107 43.0
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 1.1e-11 73.9 91 45.1
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 1.1e-11 73.9 91 41.8
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 1.5e-11 73.6 75 48.0
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 2.5e-11 72.8 85 44.7
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 3.2e-11 72.4 87 39.1
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 3.2e-11 72.4 91 44.0
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 4.2e-11 72.0 78 46.2
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 5.5e-11 71.6 87 39.1
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 5.5e-11 71.6 91 45.1
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 5.5e-11 71.6 105 40.0
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 7.2e-11 71.2 87 37.9
CARHR117350 Cardamine hirsuta HOM05D002969 ORTHO05D003308 1.2e-10 70.5 81 45.7
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 1.2e-10 70.5 91 41.8
SEGI_25885 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 2.1e-10 69.7 76 60.5
SEGI_32615 Sequoiadendron giganteum HOM05D000108 ORTHO05D001724 2.7e-10 69.3 58 70.7
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 3.6e-10 68.9 84 45.2
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 6.1e-10 68.2 90 42.2
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 6.1e-10 68.2 90 43.3
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 8.0e-10 67.8 94 41.5
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 8.0e-10 67.8 92 35.9
vmacro15028 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 8.0e-10 67.8 91 41.8
COL.COLO4_30698 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.4e-09 67.0 90 40.0
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 1.4e-09 67.0 91 39.6
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.8e-09 66.6 93 43.0
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 4.0e-09 65.5 82 40.2
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 5.2e-09 65.1 88 40.9
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 6.7e-09 64.7 79 41.8
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 1.2e-08 63.9 93 43.0
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.2e-08 63.9 93 43.0
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.2e-08 63.9 93 43.0
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 1.5e-08 63.5 91 37.4
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.5e-08 63.5 93 41.9
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 2.0e-08 63.2 79 44.3
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 2.6e-08 62.8 92 35.9
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 2.6e-08 62.8 75 41.3
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 2.6e-08 62.8 94 41.5
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 2.6e-08 62.8 94 41.5
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 2.6e-08 62.8 93 39.8
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 3.3e-08 62.4 91 44.0
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 7.5e-08 61.2 92 35.9
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 9.7e-08 60.8 93 40.9
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 1.7e-07 60.1 91 35.2
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 1.7e-07 60.1 88 39.8
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 2.8e-07 59.3 91 35.2
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 3.7e-07 58.9 87 36.8
Lalb_Chr10g0094391 Lupinus albus HOM05D002969 ORTHO05D003308 8.2e-07 57.8 82 36.6
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 1.1e-06 57.4 78 41.0
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 1.4e-06 57.0 80 38.8
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.8e-06 56.6 85 37.6
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 2.4e-06 56.2 75 40.0
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 4.1e-06 55.5 78 39.7
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.1e-06 55.5 78 38.5
Ah.01g018180 Amaranthus hybridus HOM05D002969 ORTHO05D003308 7.0e-06 54.7 93 37.6
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 7.0e-06 54.7 75 40.0
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 7.0e-06 54.7 72 38.9


User provided reference genes

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