Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24064 Sequoiadendron giganteum HOM05D002457 ORTHO05D005750 1.2e-132 476.5 230 100.0
Psat5g051160 Pisum sativum HOM05D002457 ORTHO05D005750 3.0e-51 206.1 220 50.9
Thecc.08G103800 Theobroma cacao HOM05D002457 ORTHO05D005750 4.3e-50 202.2 221 49.8
Potri.002G099400 Populus trichocarpa HOM05D002457 ORTHO05D005750 9.5e-50 201.1 219 49.8
TPR.G14216 Trifolium pratense HOM05D002457 ORTHO05D005750 1.6e-49 200.3 219 50.2
Medtr3g099370 Medicago truncatula HOM05D002457 ORTHO05D005750 2.1e-49 199.9 220 50.0
ATR0782G122 Amborella trichopoda HOM05D002457 ORTHO05D005750 2.8e-49 199.5 220 48.2
Lalb_Chr11g0065321 Lupinus albus HOM05D002457 ORTHO05D005750 2.8e-49 199.5 221 51.1
Cfa013661 Carpinus fangiana HOM05D002457 ORTHO05D005750 3.6e-49 199.1 225 48.9
CDE03G0287 Ceratophyllum demersum HOM05D002457 ORTHO05D005750 3.6e-49 199.1 218 48.2
Glyma.06G101600 Glycine max HOM05D002457 ORTHO05D005750 3.1e-48 196.1 219 49.8
FvH4_5g36800 Fragaria vesca HOM05D002457 ORTHO05D005750 5.2e-48 195.3 223 47.5
QL12p037399 Quercus lobata HOM05D002457 ORTHO05D005750 5.2e-48 195.3 219 50.2
QL12p038698 Quercus lobata HOM05D002457 ORTHO05D005750 5.2e-48 195.3 219 50.2
Nn1g05429 Nelumbo nucifera HOM05D002457 ORTHO05D005750 6.8e-48 194.9 220 48.2
Atru.chr13.1133 Acer truncatum HOM05D002457 ORTHO05D005750 8.9e-48 194.5 227 49.3
Lj1g0014547 Lotus japonicus HOM05D002457 ORTHO05D005750 2.0e-47 193.4 220 49.5
MD08G1186800 Malus domestica HOM05D002457 ORTHO05D005750 2.6e-47 193.0 219 48.4
SGA_v2.0_scaffold28G11909 Striga asiatica HOM05D002457 ORTHO05D005750 3.4e-47 192.6 219 47.5
Haze_22295 Corylus avellana HOM05D002457 ORTHO05D005750 4.4e-47 192.2 219 49.3
TAR381G1374 Trochodendron aralioides HOM05D002457 ORTHO05D005750 4.4e-47 192.2 224 47.8
arahy.Tifrunner.gnm1.ann1.Y876JP Arachis hypogaea HOM05D002457 ORTHO05D005750 9.8e-47 191.0 219 48.4
SalBow8G1618 Salvia bowleyana HOM05D002457 ORTHO05D005750 2.9e-46 189.5 216 47.2
Sabra02G0078000 Salix brachista HOM05D002457 ORTHO05D005750 4.9e-46 188.7 234 45.7
COL.COLO4_12026 Corchorus olitorius HOM05D002457 ORTHO05D005750 6.4e-46 188.3 221 47.5
RcHm_v2.0_Chr7g0243141 Rosa chinensis HOM05D002457 ORTHO05D005750 6.4e-46 188.3 219 47.5
GSVIVG01009071001 Vitis vinifera HOM05D002457 ORTHO05D005750 6.4e-46 188.3 219 48.9
arahy.Tifrunner.gnm1.ann1.H9D2WH Arachis hypogaea HOM05D002457 ORTHO05D005750 1.4e-45 187.2 232 46.6
RcHm_v2.0_Chr7g0243351 Rosa chinensis HOM05D002457 ORTHO05D005750 1.4e-45 187.2 220 46.8
Ciclev10000161m.g Citrus clementina HOM05D002457 ORTHO05D005750 3.2e-45 186.0 216 47.2
MD15G1372700 Malus domestica HOM05D002457 ORTHO05D005750 7.0e-45 184.9 219 46.1
Prupe.1G521300 Prunus persica HOM05D002457 ORTHO05D005750 7.0e-45 184.9 223 46.6
Manes.18G065400 Manihot esculenta HOM05D002457 ORTHO05D005750 2.1e-44 183.3 221 44.8
Aqoxy6G00731 Aquilegia oxysepala HOM05D002457 ORTHO05D005750 3.5e-44 182.6 223 47.5
CANSAT54G2291 Cannabis sativa HOM05D002457 ORTHO05D005750 4.6e-44 182.2 216 45.8
DCAR_019216 Daucus carota HOM05D002457 ORTHO05D005750 1.0e-43 181.0 216 46.8
Phvul.009G032400 Phaseolus vulgaris HOM05D002457 ORTHO05D005750 1.0e-43 181.0 219 46.1
Oeu054770.1 Olea europaea HOM05D002457 ORTHO05D005750 1.7e-43 180.3 216 45.8
MSTRG.22163 Avicennia marina HOM05D002457 ORTHO05D005750 2.3e-43 179.9 217 46.1
Migut.N02884 Erythranthe guttata HOM05D002457 ORTHO05D005750 2.3e-43 179.9 221 44.3
Lj4C97T15 Lonicera japonica HOM05D002457 ORTHO05D005750 2.3e-43 179.9 216 46.3
Nitab4.5_0000786g0170 Nicotiana tabacum HOM05D002457 ORTHO05D005750 2.3e-43 179.9 217 45.6
SGA_v2.0_scaffold84G26485 Striga asiatica HOM05D002457 ORTHO05D005750 2.3e-43 179.9 236 44.1
TWI12G1349 Tripterygium wilfordii HOM05D002457 ORTHO05D005750 2.3e-43 179.9 216 45.8
Nitab4.5_0006196g0020 Nicotiana tabacum HOM05D002457 ORTHO05D005750 5.1e-43 178.7 217 46.1
PGR042G2032 Punica granatum HOM05D002457 ORTHO05D005750 6.6e-43 178.3 230 44.3
vmacro21299 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 6.6e-43 178.3 223 48.4
Actinidia10339 Actinidia chinensis HOM05D002457 ORTHO05D005750 1.5e-42 177.2 219 46.6
Gohir.D01G115200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 1.9e-42 176.8 214 47.2
Gorai.002G140900 Gossypium raimondii HOM05D002457 ORTHO05D005750 1.9e-42 176.8 214 46.3
PSO447G0244 Papaver somniferum HOM05D002457 ORTHO05D005750 1.9e-42 176.8 221 42.1
vmacro21245 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 1.9e-42 176.8 223 48.0
HPP92_011199 Vanilla planifolia HOM05D002457 ORTHO05D005750 2.5e-42 176.4 217 44.2
Gohir.A01G132300 Gossypium hirsutum HOM05D002457 ORTHO05D005750 3.3e-42 176.0 214 47.2
Dinv19118 Davidia involucrata HOM05D002457 ORTHO05D005750 5.6e-42 175.3 220 46.4
Dinv44797 Davidia involucrata HOM05D002457 ORTHO05D005750 7.3e-42 174.9 225 44.9
CSS0003030 Camellia sinensis var. sinensis HOM05D002457 ORTHO05D005750 9.5e-42 174.5 219 46.6
Gohir.D05G227200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 1.6e-41 173.7 220 46.4
PSO210G3704 Papaver somniferum HOM05D002457 ORTHO05D005750 1.6e-41 173.7 221 40.7
unitig_8.g3608 Utricularia gibba HOM05D002457 ORTHO05D005750 2.1e-41 173.3 216 43.5
CiPaw.07G177900 Carya illinoinensis HOM05D002457 ORTHO05D005750 2.8e-41 172.9 223 45.3
Eucgr.F00367 Eucalyptus grandis HOM05D002457 ORTHO05D005750 3.6e-41 172.6 219 46.6
Solyc04g074490.3 Solanum lycopersicum HOM05D002457 ORTHO05D005750 3.6e-41 172.6 217 45.2
Sopen04g029500 Solanum pennellii HOM05D002457 ORTHO05D005750 6.2e-41 171.8 217 45.2
THA.LOC104810709 Tarenaya hassleriana HOM05D002457 ORTHO05D005750 1.8e-40 170.2 217 43.8
Peaxi162Scf00030g01716 Petunia axillaris HOM05D002457 ORTHO05D005750 2.3e-40 169.9 217 46.1
CAN.G970.12 Capsicum annuum HOM05D002457 ORTHO05D005750 3.1e-40 169.5 218 45.4
Gohir.A05G224700 Gossypium hirsutum HOM05D002457 ORTHO05D005750 4.0e-40 169.1 220 45.0
Gorai.009G234900 Gossypium raimondii HOM05D002457 ORTHO05D005750 6.8e-40 168.3 215 46.0
Cpa.g.sc36.165 Carica papaya HOM05D002457 ORTHO05D005750 1.5e-39 167.2 187 49.7
ClCG08G011220 Citrullus lanatus HOM05D002457 ORTHO05D005750 1.5e-39 167.2 217 42.4
MELO3C011038.2 Cucumis melo HOM05D002457 ORTHO05D005750 2.6e-39 166.4 217 42.4
Zm00001eb018970 Zea mays HOM05D002457 ORTHO05D005750 5.8e-39 165.2 218 42.2
FAN08G0375 Fragaria x ananassa HOM05D002457 ORTHO05D005750 7.5e-39 164.9 279 36.6
Ah.05g169750 Amaranthus hybridus HOM05D002457 ORTHO05D005750 1.3e-38 164.1 223 43.0
Os03g0389900 Oryza sativa ssp. japonica HOM05D002457 ORTHO05D005750 1.7e-38 163.7 216 44.0
CsaV3_2G029800 Cucumis sativus L. HOM05D002457 ORTHO05D005750 2.2e-38 163.3 216 42.1
HPP92_011193 Vanilla planifolia HOM05D002457 ORTHO05D005750 2.2e-38 163.3 216 44.0
AUR62027799 Chenopodium quinoa HOM05D002457 ORTHO05D005750 4.9e-38 162.2 221 42.1
FAN18G1557 Fragaria x ananassa HOM05D002457 ORTHO05D005750 4.9e-38 162.2 275 36.4
Cc10_g06810 Coffea canephora HOM05D002457 ORTHO05D005750 6.4e-38 161.8 219 41.1
AUR62018953 Chenopodium quinoa HOM05D002457 ORTHO05D005750 2.4e-37 159.8 221 40.7
AT1G78280 Arabidopsis thaliana HOM05D002457 ORTHO05D005750 7.1e-37 158.3 220 43.6
Carub.0002s2518 Capsella rubella HOM05D002457 ORTHO05D005750 2.1e-36 156.8 221 42.1
Thhalv10018079m.g Eutrema salsugineum HOM05D002457 ORTHO05D005750 2.1e-36 156.8 218 41.3
EL10Ac1g01165 Beta vulgaris HOM05D002457 ORTHO05D005750 2.7e-36 156.4 216 43.5
FAN04G0153 Fragaria x ananassa HOM05D002457 ORTHO05D005750 2.7e-36 156.4 230 39.6
Rhsim06G0078900 Rhododendron simsii HOM05D002457 ORTHO05D005750 1.0e-35 154.5 224 44.6
HanXRQChr09g0250381 Helianthus annuus HOM05D002457 ORTHO05D005750 2.3e-35 153.3 216 40.7
Aa31LG4G8280 Aethionema arabicum HOM05D002457 ORTHO05D005750 3.0e-35 152.9 219 41.6
BcaB05g25129 Brassica carinata HOM05D002457 ORTHO05D005750 3.0e-35 152.9 216 40.3
BcaB03g16003 Brassica carinata HOM05D002457 ORTHO05D005750 6.6e-35 151.8 219 40.2
CARHR071750 Cardamine hirsuta HOM05D002457 ORTHO05D005750 6.6e-35 151.8 219 41.1
Hund26976 Selenicereus undatus HOM05D002457 ORTHO05D005750 6.6e-35 151.8 221 41.2
Lsat_1_v5_gn_9_72780 Lactuca sativa HOM05D002457 ORTHO05D005750 1.5e-34 150.6 206 41.3
FAN13G1549 Fragaria x ananassa HOM05D002457 ORTHO05D005750 5.6e-34 148.7 274 36.5
Sp5g33400 Schrenkiella parvula HOM05D002457 ORTHO05D005750 5.6e-34 148.7 219 40.2
BolC6t40246H Brassica oleracea HOM05D002457 ORTHO05D005750 7.3e-34 148.3 219 41.1
MBI02_g27963_MAGBIO Magnolia biondii HOM05D002457 ORTHO05D005750 7.3e-34 148.3 124 57.3
BcaC08g47405 Brassica carinata HOM05D002457 ORTHO05D005750 1.2e-33 147.5 217 40.1
C06p52240 Brassica napus HOM05D002457 ORTHO05D005750 1.2e-33 147.5 219 40.2
A07p43570 Brassica napus HOM05D002457 ORTHO05D005750 4.7e-33 145.6 218 39.0
BraA07t31869Z Brassica rapa HOM05D002457 ORTHO05D005750 4.7e-33 145.6 218 39.0
C02p35500 Brassica napus HOM05D002457 ORTHO05D005750 6.8e-32 141.7 218 37.6
Mapoly0027s0020 Marchantia polymorpha HOM05D002457 ORTHO05D005750 6.8e-32 141.7 215 39.1
SMO351G0300 Selaginella moellendorffii HOM05D002457 ORTHO05D005750 2.2e-30 136.7 211 38.4
BcaC03g15804 Brassica carinata HOM05D002457 ORTHO05D005750 3.8e-30 136.0 180 41.7
Pp3c7_15150 Physcomitrium patens HOM05D002457 ORTHO05D005750 1.2e-28 131.0 212 36.3
Pp3c11_17580 Physcomitrium patens HOM05D002457 ORTHO05D005750 6.0e-28 128.6 217 35.9
ECA232G3235 Erigeron canadensis HOM05D002457 ORTHO05D005750 9.6e-26 121.3 186 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4998 Anthoceros agrestis HOM05D002457 ORTHO05D005750 1.6e-25 120.6 216 35.6
RcHm_v2.0_Chr7g0243001 Rosa chinensis HOM05D002457 ORTHO05D005750 6.9e-24 115.2 146 46.6
AL2G38630 Arabidopsis lyrata HOM05D002457 ORTHO05D005750 2.2e-22 110.2 220 36.4
Sed0005289 Sechium edule HOM05D002457 ORTHO05D005750 4.9e-22 109.0 173 39.9
Cpa.g.sc36.164 Carica papaya HOM05D002457 ORTHO05D005750 8.4e-22 108.2 176 41.5
A02p22110 Brassica napus HOM05D002457 ORTHO05D005750 9.3e-13 78.2 59 54.2
BolC2t09568H Brassica oleracea HOM05D002457 ORTHO05D005750 1.6e-12 77.4 143 35.0
RcHm_v2.0_Chr7g0242991 Rosa chinensis HOM05D002457 ORTHO05D005750 2.1e-12 77.0 44 68.2
RcHm_v2.0_Chr7g0242931 Rosa chinensis HOM05D002457 ORTHO05D005750 1.1e-10 71.2 44 59.1
Ca_16043_v3 Cicer arietinum L. HOM05D002457 ORTHO05D005750 1.8e-08 63.9 112 38.4
HPP92_011163 Vanilla planifolia HOM05D002457 ORTHO05D005750 2.6e-07 60.1 81 39.5
Ca_14149_v3 Cicer arietinum L. HOM05D000298 ORTHO05D000553 3.4e-07 59.7 108 36.1


User provided reference genes

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