Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11602 Sequoiadendron giganteum HOM05D006629 ORTHO05D008430 1.9e-68 262.3 125 100.0
SEGI_23999 Sequoiadendron giganteum HOM05D006629 ORTHO05D008430 1.9e-68 262.3 125 100.0
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.3e-16 90.1 81 59.3
Hund00536 Selenicereus undatus HOM05D006629 ORTHO05D008430 4.9e-16 88.2 58 70.7
MBI01_g40020_MAGBIO Magnolia biondii HOM05D006629 ORTHO05D008430 1.9e-15 86.3 58 69.0
MBI01_g47382_MAGBIO Magnolia biondii HOM05D006629 ORTHO05D008430 1.9e-15 86.3 58 69.0
SEGI_20287 Sequoiadendron giganteum HOM05D001891 ORTHO05D005832 2.4e-15 85.9 58 72.4
Manes.04G115000 Manihot esculenta HOM05D006629 ORTHO05D008430 7.0e-15 84.3 58 65.5
PSO170G1412 Papaver somniferum HOM05D006629 ORTHO05D008430 9.2e-15 84.0 58 65.5
CSS0009902 Camellia sinensis var. sinensis HOM05D006629 ORTHO05D008430 1.2e-14 83.6 58 63.8
TAR383G1031 Trochodendron aralioides HOM05D006629 ORTHO05D008430 1.2e-14 83.6 58 65.5
AUR62016355 Chenopodium quinoa HOM05D006629 ORTHO05D008430 1.6e-14 83.2 58 63.8
Potri.008G213200 Populus trichocarpa HOM05D006629 ORTHO05D008430 2.1e-14 82.8 58 65.5
ATR0322G059 Amborella trichopoda HOM05D006629 ORTHO05D008430 2.7e-14 82.4 58 60.3
MSTRG.11130 Avicennia marina HOM05D006629 ORTHO05D008430 2.7e-14 82.4 58 63.8
GSVIVG01017300001 Vitis vinifera HOM05D006629 ORTHO05D008430 2.7e-14 82.4 58 63.8
Nn8g39443 Nelumbo nucifera HOM05D006629 ORTHO05D008430 3.5e-14 82.0 58 63.8
PSO017G2975 Papaver somniferum HOM05D006629 ORTHO05D008430 3.5e-14 82.0 58 63.8
Prupe.3G083500 Prunus persica HOM05D006629 ORTHO05D008430 3.5e-14 82.0 58 63.8
Ciclev10026597m.g Citrus clementina HOM05D006629 ORTHO05D008430 4.6e-14 81.6 60 60.0
SGA_v2.0_scaffold5G02676 Striga asiatica HOM05D006629 ORTHO05D008430 4.6e-14 81.6 58 58.6
Ah.01g020720 Amaranthus hybridus HOM05D006629 ORTHO05D008430 6.0e-14 81.3 58 62.1
Haze_16533 Corylus avellana HOM05D006629 ORTHO05D008430 6.0e-14 81.3 58 62.1
CsaV3_4G001490 Cucumis sativus L. HOM05D006629 ORTHO05D008430 6.0e-14 81.3 58 62.1
FAN02G3434 Fragaria x ananassa HOM05D006629 ORTHO05D008430 6.0e-14 81.3 58 62.1
FAN09G3876 Fragaria x ananassa HOM05D006629 ORTHO05D008430 6.0e-14 81.3 58 62.1
TWI18G0931 Tripterygium wilfordii HOM05D006629 ORTHO05D008430 6.0e-14 81.3 58 60.3
Cpa.g.sc10.240 Carica papaya HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 63.8
ClCG07G012710 Citrullus lanatus HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 62.1
MELO3C017890.2 Cucumis melo HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 62.1
FvH4_6g30000 Fragaria vesca HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 60.3
FAN14G1255 Fragaria x ananassa HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 60.3
Lj5C70G0 Lonicera japonica HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 62.1
QL05p028345 Quercus lobata HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 62.1
Sabra08G0150000 Salix brachista HOM05D006629 ORTHO05D008430 7.8e-14 80.9 58 65.5
Cc04_g04220 Coffea canephora HOM05D006629 ORTHO05D008430 1.0e-13 80.5 58 63.8
Eucgr.F02111 Eucalyptus grandis HOM05D006629 ORTHO05D008430 1.0e-13 80.5 58 62.1
Eucgr.F02534 Eucalyptus grandis HOM05D006629 ORTHO05D008430 1.0e-13 80.5 58 62.1
HanXRQChr12g0361441 Helianthus annuus HOM05D006629 ORTHO05D008430 1.0e-13 80.5 58 62.1
EL10Ac9g21916 Beta vulgaris HOM05D006629 ORTHO05D008430 1.3e-13 80.1 58 60.3
Migut.I00787 Erythranthe guttata HOM05D006629 ORTHO05D008430 1.3e-13 80.1 57 61.4
Aqoxy7G03710 Aquilegia oxysepala HOM05D006629 ORTHO05D008430 1.7e-13 79.7 58 60.3
AT1G52590 Arabidopsis thaliana HOM05D006629 ORTHO05D008430 1.7e-13 79.7 58 62.1
Ca_01063_v3 Cicer arietinum L. HOM05D006629 ORTHO05D008430 1.7e-13 79.7 58 62.1
Glyma.13G364600 Glycine max HOM05D006629 ORTHO05D008430 1.7e-13 79.7 58 62.1
SMO266G0086 Selaginella moellendorffii HOM05D006629 ORTHO05D008430 1.7e-13 79.7 60 65.0
Sc23g0006680 Simmondsia chinensis HOM05D006629 ORTHO05D008430 1.7e-13 79.7 58 60.3
VMungo1080G1280 Vigna mungo HOM05D006629 ORTHO05D008430 1.7e-13 79.7 58 60.3
A08p02130 Brassica napus HOM05D006629 ORTHO05D008430 2.3e-13 79.3 58 60.3
BraA08t32260Z Brassica rapa HOM05D006629 ORTHO05D008430 2.3e-13 79.3 58 60.3
Duzib235G0045 Durio zibethinus HOM05D006629 ORTHO05D008430 2.3e-13 79.3 58 62.1
Thhalv10011823m.g Eutrema salsugineum HOM05D006629 ORTHO05D008430 2.3e-13 79.3 58 60.3
Rhsim08G0214800 Rhododendron simsii HOM05D006629 ORTHO05D008430 2.3e-13 79.3 58 60.3
RcHm_v2.0_Chr2g0136021 Rosa chinensis HOM05D006629 ORTHO05D008430 2.3e-13 79.3 58 60.3
BcaB04g17151 Brassica carinata HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
CAN.G407.97 Capsicum annuum HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
ECA234G2539 Erigeron canadensis HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
Lsat_1_v5_gn_5_131321 Lactuca sativa HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
Nitab4.5_0001764g0020 Nicotiana tabacum HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
Nitab4.5_0010254g0040 Nicotiana tabacum HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
Oeu052266.1 Olea europaea HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 58.6
SalBow2G3434 Salvia bowleyana HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 56.9
Solyc03g116570.3 Solanum lycopersicum HOM05D006629 ORTHO05D008430 3.0e-13 79.0 58 60.3
BcaC01g01330 Brassica carinata HOM05D006629 ORTHO05D008430 3.9e-13 78.6 58 60.3
C03p90690 Brassica napus HOM05D006629 ORTHO05D008430 3.9e-13 78.6 58 60.3
BolC3t21390H Brassica oleracea HOM05D006629 ORTHO05D008430 3.9e-13 78.6 58 60.3
Rhsim04G0187300 Rhododendron simsii HOM05D006629 ORTHO05D008430 3.9e-13 78.6 58 58.6
AL1G60870 Arabidopsis lyrata HOM05D006629 ORTHO05D008430 5.1e-13 78.2 58 58.6
Gohir.D06G192700 Gossypium hirsutum HOM05D006629 ORTHO05D008430 5.1e-13 78.2 58 62.1
Gorai.010G226500 Gossypium raimondii HOM05D006629 ORTHO05D008430 5.1e-13 78.2 58 62.1
Lalb_Chr22g0350921 Lupinus albus HOM05D006629 ORTHO05D008430 5.1e-13 78.2 58 60.3
Sp1g39150 Schrenkiella parvula HOM05D006629 ORTHO05D008430 5.1e-13 78.2 58 60.3
Gohir.A06G186400 Gossypium hirsutum HOM05D006629 ORTHO05D008430 6.6e-13 77.8 58 60.3
Phvul.005G176800 Phaseolus vulgaris HOM05D006629 ORTHO05D008430 6.6e-13 77.8 58 60.3
Sopen03g035480 Solanum pennellii HOM05D006629 ORTHO05D008430 6.6e-13 77.8 58 58.6
TPR.G37207 Trifolium pratense HOM05D006629 ORTHO05D008430 6.6e-13 77.8 58 58.6
vmacro18979 Vaccinium macrocarpon HOM05D006629 ORTHO05D008430 6.6e-13 77.8 58 58.6
vmacro23010 Vaccinium macrocarpon HOM05D006629 ORTHO05D008430 6.6e-13 77.8 58 58.6
PGSC0003DMG400000613 Solanum tuberosum HOM05D006629 ORTHO05D008430 8.6e-13 77.4 58 58.6
Hma1.2p1_0042F.1_g025470 Hydrangea macrophylla HOM05D006629 ORTHO05D008430 1.1e-12 77.0 58 56.9
Peaxi162Scf00332g00758 Petunia axillaris HOM05D006629 ORTHO05D008430 1.1e-12 77.0 58 58.6
Zm00001eb122820 Zea mays HOM05D006629 ORTHO05D008430 1.1e-12 77.0 60 65.0
CARHR042720 Cardamine hirsuta HOM05D006629 ORTHO05D008430 1.5e-12 76.6 58 58.6
CiPaw.01G246000 Carya illinoinensis HOM05D006629 ORTHO05D008430 1.5e-12 76.6 58 56.9
AUR62011536 Chenopodium quinoa HOM05D006629 ORTHO05D008430 1.5e-12 76.6 52 67.3
Medtr2g103590 Medicago truncatula HOM05D006629 ORTHO05D008430 1.5e-12 76.6 58 58.6
PGR102G3125 Punica granatum HOM05D006629 ORTHO05D008430 1.5e-12 76.6 58 56.9
Sed0005686 Sechium edule HOM05D006629 ORTHO05D008430 1.5e-12 76.6 58 62.1
Aa31LG10G2420 Aethionema arabicum HOM05D006629 ORTHO05D008430 1.9e-12 76.3 58 60.3
CSS0049498 Camellia sinensis var. sinensis HOM05D006629 ORTHO05D008430 1.9e-12 76.3 53 66.0
Lj3g0011933 Lotus japonicus HOM05D006629 ORTHO05D008430 1.9e-12 76.3 58 56.9
MBI14_g42957_MAGBIO Magnolia biondii HOM05D006629 ORTHO05D008430 1.9e-12 76.3 58 63.8
Thecc.06G069100 Theobroma cacao HOM05D006629 ORTHO05D008430 1.9e-12 76.3 58 63.8
CDE04G2501 Ceratophyllum demersum HOM05D006629 ORTHO05D008430 2.5e-12 75.9 60 58.3
THA.LOC104818030 Tarenaya hassleriana HOM05D006629 ORTHO05D008430 3.3e-12 75.5 58 58.6
Carub.0001s4159 Capsella rubella HOM05D006629 ORTHO05D008430 4.3e-12 75.1 57 57.9
CDE06G1467 Ceratophyllum demersum HOM05D006629 ORTHO05D008430 4.3e-12 75.1 60 55.0
DCAR_025501 Daucus carota HOM05D006629 ORTHO05D008430 4.3e-12 75.1 57 57.9
Atru.chr1.3007 Acer truncatum HOM05D006629 ORTHO05D008430 5.6e-12 74.7 60 56.7
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 1.2e-11 73.6 56 58.9
MD00G1022200 Malus domestica HOM05D006629 ORTHO05D008430 2.1e-11 72.8 53 60.4
Actinidia15782 Actinidia chinensis HOM05D006629 ORTHO05D008430 2.8e-11 72.4 53 62.3
Glyma.15G009100 Glycine max HOM05D006629 ORTHO05D008430 3.6e-11 72.0 54 57.4
unitig_52.g17452 Utricularia gibba HOM05D006629 ORTHO05D008430 3.6e-11 72.0 58 56.9
HPP92_021817 Vanilla planifolia HOM05D006629 ORTHO05D008430 3.6e-11 72.0 60 61.7
Mapoly0033s0027 Marchantia polymorpha HOM05D006629 ORTHO05D008430 6.2e-11 71.2 60 53.3
Cre14.g622750 Chlamydomonas reinhardtii HOM05D006629 ORTHO05D008430 1.2e-09 67.0 58 56.9
Pp3c1_15690 Physcomitrium patens HOM05D006629 ORTHO05D008430 8.3e-08 60.8 60 50.0
SEGI_35308 Sequoiadendron giganteum HOM05D000066 ORTHO05D386872 9.2e-07 57.4 36 69.4
PRCOL_00001525 Prasinoderma coloniale HOM05D006629 ORTHO05D008430 1.6e-06 56.6 61 47.5
SEGI_04544 Sequoiadendron giganteum HOM05D001690 ORTHO05D009096 2.1e-06 56.2 55 52.7
BcaB07g32380 Brassica carinata HOM05D001690 ORTHO05D009096 3.5e-06 55.5 51 56.9
A09p40800 Brassica napus HOM05D001690 ORTHO05D009096 4.6e-06 55.1 51 56.9
C05p23190 Brassica napus HOM05D001690 ORTHO05D009096 4.6e-06 55.1 51 56.9
BraA09t39574Z Brassica rapa HOM05D001690 ORTHO05D009096 4.6e-06 55.1 51 56.9
BcaC05g26303 Brassica carinata HOM05D001690 ORTHO05D009096 6.0e-06 54.7 51 56.9
BolC5t31021H Brassica oleracea HOM05D001690 ORTHO05D009096 6.0e-06 54.7 51 56.9
COL.COLO4_37898 Corchorus olitorius HOM05D001690 ORTHO05D002627 7.8e-06 54.3 51 52.9
Peaxi162Scf00421g00710 Petunia axillaris HOM05D001690 ORTHO05D009096 7.8e-06 54.3 51 54.9


User provided reference genes

Program Settings