Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 5.7e-269 930.2 444 100.0
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.0e-255 883.2 460 93.3
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 8.0e-255 883.2 460 93.3
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.9e-236 820.8 460 88.0
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.8e-142 510.0 243 98.8
SEGI_15462 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 3.1e-89 333.2 194 83.0
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 8.2e-58 228.8 215 61.9
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 8.2e-58 228.8 215 61.9
SHI36845 Sapria himalayana HOM05D009256 ORTHO05D011704 2.0e-43 181.0 253 47.0
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 5.2e-36 156.4 135 64.4
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 5.2e-36 156.4 135 64.4
BraSC48t46276Z Brassica rapa HOM05D009256 ORTHO05D011704 4.4e-35 153.3 93 82.8
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 1.6e-29 134.8 185 46.5
SEGI_30283 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 4.1e-25 120.2 59 91.5
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 9.2e-25 119.0 106 61.3
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 2.0e-24 117.9 99 65.7
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 2.0e-24 117.9 99 65.7
Medtr4g091430 Medicago truncatula HOM05D009256 ORTHO05D011704 2.3e-23 114.4 103 61.2
C04p19680 Brassica napus HOM05D009256 ORTHO05D011704 2.9e-23 114.0 81 71.6
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 5.0e-23 113.2 98 63.3
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 7.5e-19 99.4 138 50.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 7.5e-19 99.4 138 50.0
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 7.5e-19 99.4 138 50.0
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 2.2e-18 97.8 138 49.3
Sopen10g009710 Solanum pennellii HOM05D000014 ORTHO05D000093 2.2e-18 97.8 106 52.8
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 2.4e-17 94.4 138 50.0
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 7.0e-17 92.8 167 40.1
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.2e-16 92.0 138 47.8
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 2.7e-16 90.9 200 39.0
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.9e-15 87.0 136 47.1
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.5e-14 84.3 130 50.0
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 5.6e-14 83.2 142 45.1
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 7.3e-14 82.8 130 49.2
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 7.3e-14 82.8 130 49.2
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 3.6e-13 80.5 140 45.0
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.6e-13 80.5 140 45.0
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 4.7e-13 80.1 143 44.1
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 6.2e-13 79.7 130 48.5
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 1.1e-12 79.0 133 45.9
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 1.5e-11 75.1 135 45.2
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 1.5e-11 75.1 135 45.2
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.5e-11 75.1 135 45.2
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 2.0e-11 74.7 217 33.6
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 3.4e-11 73.9 136 41.2
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 4.4e-11 73.6 135 44.4
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 4.4e-11 73.6 135 44.4
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 4.4e-11 73.6 135 44.4
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 4.4e-11 73.6 135 44.4
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 9.8e-11 72.4 122 42.6
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 2.2e-10 71.2 135 43.7
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 2.9e-10 70.9 114 49.1
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 5.4e-09 66.6 59 62.7
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 5.4e-09 66.6 146 41.8
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 1.2e-08 65.5 56 64.3
BolC4t23503H Brassica oleracea HOM05D009256 ORTHO05D011704 1.6e-08 65.1 41 78.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 1.0e-07 62.4 56 62.5
SHI10410 Sapria himalayana HOM05D003471 ORTHO05D004079 1.7e-07 61.6 38 76.3
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 2.3e-07 61.2 53 64.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.6e-07 59.7 138 41.3
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 8.6e-07 59.3 56 58.9
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 1.9e-06 58.2 58 60.3
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 3.3e-06 57.4 61 52.5
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 9.5e-06 55.8 48 66.7


User provided reference genes

Program Settings