Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23942 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 1.4e-57 226.1 114 100.0
SEGI_04633 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 8.9e-41 170.2 111 82.0
SEGI_22179 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 8.9e-41 170.2 111 82.0
SEGI_08021 Sequoiadendron giganteum HOM05D004386 ORTHO05D005247 2.6e-32 142.1 139 59.0
Sed0006302 Sechium edule HOM05D004386 ORTHO05D005247 2.3e-12 75.9 136 34.6
Solyc02g086470.3 Solanum lycopersicum HOM05D004386 ORTHO05D005247 3.0e-12 75.5 141 39.0
Peaxi162Scf00129g01540 Petunia axillaris HOM05D004386 ORTHO05D005247 5.1e-12 74.7 139 34.5
Pp3c15_21840 Physcomitrium patens HOM05D004386 ORTHO05D005247 8.7e-12 73.9 139 34.5
Sopen02g031190 Solanum pennellii HOM05D004386 ORTHO05D005247 8.7e-12 73.9 141 38.3
ClCG10G013910 Citrullus lanatus HOM05D004386 ORTHO05D005247 1.1e-11 73.6 132 35.6
MBI16_g23842_MAGBIO Magnolia biondii HOM05D004386 ORTHO05D005247 1.5e-11 73.2 143 34.3
Dinv33445 Davidia involucrata HOM05D004386 ORTHO05D005247 1.9e-11 72.8 140 33.6
Lj7A599T80 Lonicera japonica HOM05D004386 ORTHO05D005247 4.3e-11 71.6 139 33.8
Nitab4.5_0006802g0040 Nicotiana tabacum HOM05D004386 ORTHO05D005247 4.3e-11 71.6 139 31.7
Atru.chr6.2286 Acer truncatum HOM05D004386 ORTHO05D005247 7.4e-11 70.9 139 32.4
Gohir.D11G070400 Gossypium hirsutum HOM05D004386 ORTHO05D005247 7.4e-11 70.9 139 33.1
Gorai.007G075500 Gossypium raimondii HOM05D004386 ORTHO05D005247 7.4e-11 70.9 139 33.1
Mapoly0154s0005 Marchantia polymorpha HOM05D004386 ORTHO05D005247 7.4e-11 70.9 139 33.8
Nitab4.5_0002682g0120 Nicotiana tabacum HOM05D004386 ORTHO05D005247 7.4e-11 70.9 139 33.8
Aqoxy5G03803 Aquilegia oxysepala HOM05D004386 ORTHO05D005247 9.6e-11 70.5 132 37.9
QL02p074814 Quercus lobata HOM05D004386 ORTHO05D005247 9.6e-11 70.5 140 33.6
PGR083G0256 Punica granatum HOM05D004386 ORTHO05D005247 1.3e-10 70.1 139 33.1
PGSC0003DMG400012630 Solanum tuberosum HOM05D004386 ORTHO05D005247 1.3e-10 70.1 140 36.4
MD17G1027700 Malus domestica HOM05D004386 ORTHO05D005247 1.6e-10 69.7 139 33.8
RcHm_v2.0_Chr2g0172901 Rosa chinensis HOM05D004386 ORTHO05D005247 1.6e-10 69.7 139 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1179 Anthoceros agrestis HOM05D004386 ORTHO05D005247 2.1e-10 69.3 139 36.7
COL.COLO4_29103 Corchorus olitorius HOM05D004386 ORTHO05D005247 2.1e-10 69.3 139 33.8
HPP92_006408 Vanilla planifolia HOM05D004386 ORTHO05D005247 2.1e-10 69.3 140 29.3
Duzib147G0401 Durio zibethinus HOM05D004386 ORTHO05D005247 3.6e-10 68.6 139 33.1
FAN02G3912 Fragaria x ananassa HOM05D004386 ORTHO05D005247 3.6e-10 68.6 139 34.5
FAN09G3114 Fragaria x ananassa HOM05D004386 ORTHO05D005247 3.6e-10 68.6 139 34.5
Hma1.2p1_1291F.1_g273490 Hydrangea macrophylla HOM05D004386 ORTHO05D005247 3.6e-10 68.6 141 34.0
FvH4_6g51280 Fragaria vesca HOM05D004386 ORTHO05D005247 4.8e-10 68.2 139 34.5
FAN14G1865 Fragaria x ananassa HOM05D004386 ORTHO05D005247 4.8e-10 68.2 139 34.5
FAN05G0117 Fragaria x ananassa HOM05D004386 ORTHO05D005247 6.2e-10 67.8 139 34.5
Manes.17G112600 Manihot esculenta HOM05D004386 ORTHO05D005247 6.2e-10 67.8 139 32.4
CANSAT64G0389 Cannabis sativa HOM05D004386 ORTHO05D005247 8.1e-10 67.4 139 31.7
CiPaw.03G043200 Carya illinoinensis HOM05D004386 ORTHO05D005247 8.1e-10 67.4 139 35.3
Potri.001G345400 Populus trichocarpa HOM05D004386 ORTHO05D005247 8.1e-10 67.4 140 30.7
ATR0585G118 Amborella trichopoda HOM05D004386 ORTHO05D005247 1.4e-09 66.6 142 32.4
PSO832G3302 Papaver somniferum HOM05D004386 ORTHO05D005247 1.4e-09 66.6 141 31.9
CBR_g29535 Chara braunii HOM05D004386 ORTHO05D005247 1.8e-09 66.2 143 30.1
SalBow1G5144 Salvia bowleyana HOM05D004386 ORTHO05D005247 1.8e-09 66.2 146 33.6
Sed0019384 Sechium edule HOM05D004386 ORTHO05D005247 1.8e-09 66.2 132 34.1
Lj2g0022197 Lotus japonicus HOM05D004386 ORTHO05D005247 2.4e-09 65.9 139 32.4
MD09G1027800 Malus domestica HOM05D004386 ORTHO05D005247 2.4e-09 65.9 139 33.1
Manes.15G150000 Manihot esculenta HOM05D004386 ORTHO05D005247 2.4e-09 65.9 139 32.4
Prupe.3G291000 Prunus persica HOM05D004386 ORTHO05D005247 3.1e-09 65.5 140 33.6
TAR374G1586 Trochodendron aralioides HOM05D004386 ORTHO05D005247 5.3e-09 64.7 142 28.2
Haze_14735 Corylus avellana HOM05D004386 ORTHO05D005247 6.9e-09 64.3 139 32.4
CsaV3_3G042780 Cucumis sativus L. HOM05D004386 ORTHO05D005247 6.9e-09 64.3 132 33.3
Phvul.007G112800 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 6.9e-09 64.3 139 30.2
Cfa007374 Carpinus fangiana HOM05D004386 ORTHO05D005247 9.0e-09 63.9 139 33.1
Cc07_g01760 Coffea canephora HOM05D004386 ORTHO05D005247 9.0e-09 63.9 140 31.4
Glyma.05G004600 Glycine max HOM05D004386 ORTHO05D005247 9.0e-09 63.9 140 30.7
Glyma.19G005200 Glycine max HOM05D004386 ORTHO05D005247 1.2e-08 63.5 140 29.3
Thecc.04G016500 Theobroma cacao HOM05D004386 ORTHO05D005247 1.2e-08 63.5 139 30.9
Nn4g22656 Nelumbo nucifera HOM05D004386 ORTHO05D005247 1.5e-08 63.2 139 30.2
Migut.H00080 Erythranthe guttata HOM05D004386 ORTHO05D005247 2.0e-08 62.8 139 33.1
TWI12G1386 Tripterygium wilfordii HOM05D004386 ORTHO05D005247 2.0e-08 62.8 139 30.9
PSO063G4583 Papaver somniferum HOM05D004386 ORTHO05D005247 2.6e-08 62.4 141 31.2
Sp2g16770 Schrenkiella parvula HOM05D004386 ORTHO05D005247 2.6e-08 62.4 140 32.9
Carub.0005s0608 Capsella rubella HOM05D004386 ORTHO05D005247 4.5e-08 61.6 140 33.6
DCAR_001447 Daucus carota HOM05D004386 ORTHO05D005247 4.5e-08 61.6 139 28.1
Oeu057061.2 Olea europaea HOM05D004386 ORTHO05D005247 4.5e-08 61.6 140 31.4
Phvul.004G010500 Phaseolus vulgaris HOM05D004386 ORTHO05D005247 4.5e-08 61.6 139 29.5
Sabra16G0224400 Salix brachista HOM05D004386 ORTHO05D005247 4.5e-08 61.6 140 30.0
CARHR149060 Cardamine hirsuta HOM05D004386 ORTHO05D005247 5.8e-08 61.2 140 33.6
BcaC06g30967 Brassica carinata HOM05D004386 ORTHO05D005247 7.6e-08 60.8 140 32.9
DCAR_021718 Daucus carota HOM05D004386 ORTHO05D005247 7.6e-08 60.8 127 37.0
Eucgr.J02238 Eucalyptus grandis HOM05D004386 ORTHO05D005247 7.6e-08 60.8 139 30.9
AL5G17060 Arabidopsis lyrata HOM05D004386 ORTHO05D005247 9.9e-08 60.5 129 35.7
BcaC06g33792 Brassica carinata HOM05D004386 ORTHO05D005247 9.9e-08 60.5 140 32.1
C07p36830 Brassica napus HOM05D004386 ORTHO05D005247 9.9e-08 60.5 140 32.1
BolC7t44196H Brassica oleracea HOM05D004386 ORTHO05D005247 9.9e-08 60.5 140 32.1
BraA09t35984Z Brassica rapa HOM05D004386 ORTHO05D005247 1.3e-07 60.1 129 35.7
Ciclev10014954m.g Citrus clementina HOM05D004386 ORTHO05D005247 1.3e-07 60.1 139 31.7
Thhalv10004025m.g Eutrema salsugineum HOM05D004386 ORTHO05D005247 1.3e-07 60.1 130 36.2
THA.LOC104805372 Tarenaya hassleriana HOM05D004386 ORTHO05D005247 1.7e-07 59.7 127 35.4
VMungo0464G0678 Vigna mungo HOM05D004386 ORTHO05D005247 1.7e-07 59.7 139 30.2
A06p41010 Brassica napus HOM05D004386 ORTHO05D005247 2.2e-07 59.3 140 32.1
A09p03460 Brassica napus HOM05D004386 ORTHO05D005247 2.2e-07 59.3 129 35.7
BraA06t27020Z Brassica rapa HOM05D004386 ORTHO05D005247 2.2e-07 59.3 140 32.1
Ca_04168_v3 Cicer arietinum L. HOM05D004386 ORTHO05D005247 2.2e-07 59.3 140 30.0
Gorai.001G264600 Gossypium raimondii HOM05D004386 ORTHO05D005247 2.2e-07 59.3 132 28.8
HanXRQChr17g0548511 Helianthus annuus HOM05D004386 ORTHO05D005247 2.2e-07 59.3 140 29.3
Nitab4.5_0007892g0010 Nicotiana tabacum HOM05D004386 ORTHO05D005247 2.9e-07 58.9 140 31.4
AT3G27640 Arabidopsis thaliana HOM05D004386 ORTHO05D005247 4.9e-07 58.2 127 34.6
Gohir.A11G066200 Gossypium hirsutum HOM05D004386 ORTHO05D005247 4.9e-07 58.2 93 34.4
Cpa.g.sc108.64 Carica papaya HOM05D004386 ORTHO05D005247 6.4e-07 57.8 140 31.4
Gohir.A07G222800 Gossypium hirsutum HOM05D004386 ORTHO05D005247 6.4e-07 57.8 132 28.8
Actinidia06000 Actinidia chinensis HOM05D004386 ORTHO05D005247 8.4e-07 57.4 137 31.4
Psat1g054840 Pisum sativum HOM05D004386 ORTHO05D005247 8.4e-07 57.4 143 30.8
MSTRG.24035 Avicennia marina HOM05D004386 ORTHO05D005247 1.9e-06 56.2 93 40.9
Aa31LG2G5030 Aethionema arabicum HOM05D004386 ORTHO05D005247 2.4e-06 55.8 127 33.9
CSS0006108 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 2.4e-06 55.8 139 28.1
Lalb_Chr06g0175761 Lupinus albus HOM05D004386 ORTHO05D005247 2.4e-06 55.8 139 28.1
Zm00001eb053910 Zea mays HOM05D004386 ORTHO05D005247 2.4e-06 55.8 140 28.6
TPR.G14088 Trifolium pratense HOM05D004386 ORTHO05D005247 3.2e-06 55.5 140 29.3
CSS0036222 Camellia sinensis var. sinensis HOM05D004386 ORTHO05D005247 4.2e-06 55.1 139 28.1
Medtr6g005220 Medicago truncatula HOM05D004386 ORTHO05D005247 4.2e-06 55.1 139 29.5
CDE06G2157 Ceratophyllum demersum HOM05D004386 ORTHO05D005247 9.3e-06 53.9 86 33.7


User provided reference genes

Program Settings