Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 0.0e+00 1386.3 698 100.0
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 2.0e-143 513.8 702 45.9
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 1.0e-142 511.5 429 57.6
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 1.0e-142 511.5 563 50.3
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 1.0e-142 511.5 580 49.1
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 2.2e-142 510.4 575 50.6
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 3.2e-141 506.5 485 53.4
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 7.2e-141 505.4 671 43.8
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 9.3e-141 505.0 561 50.8
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.2e-140 504.6 577 49.0
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 3.5e-140 503.1 580 48.4
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 6.1e-140 502.3 604 46.2
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 1.3e-139 501.1 397 60.5
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.3e-139 501.1 397 60.5
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.3e-139 501.1 429 56.6
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.8e-139 500.7 574 47.6
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.8e-139 500.7 632 46.5
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 3.0e-139 500.0 404 59.7
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.9e-139 499.6 437 56.1
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 5.1e-139 499.2 390 60.8
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 5.1e-139 499.2 627 47.4
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 5.1e-139 499.2 627 47.4
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 8.7e-139 498.4 431 57.5
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 1.5e-138 497.7 392 59.7
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 1.9e-138 497.3 435 56.8
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 1.9e-138 497.3 435 56.8
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.9e-138 497.3 600 46.7
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.5e-138 496.9 631 46.9
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 3.3e-138 496.5 435 57.2
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 3.3e-138 496.5 647 44.7
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 4.3e-138 496.1 632 46.5
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 7.4e-138 495.4 585 47.9
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 9.7e-138 495.0 458 53.5
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.3e-137 494.6 399 58.1
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 1.3e-137 494.6 570 49.8
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 2.8e-137 493.4 412 57.0
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 3.7e-137 493.0 392 58.7
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.7e-137 493.0 431 56.8
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 4.8e-137 492.7 407 59.2
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 6.3e-137 492.3 583 48.0
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 8.2e-137 491.9 395 59.2
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 8.2e-137 491.9 583 47.2
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 8.2e-137 491.9 720 43.3
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.1e-136 491.5 582 47.4
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.8e-136 490.7 619 45.4
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 2.4e-136 490.3 487 51.5
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 4.1e-136 489.6 624 45.8
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 6.9e-136 488.8 435 55.2
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 6.9e-136 488.8 744 41.4
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 9.0e-136 488.4 435 55.2
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 1.2e-135 488.0 621 45.4
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 2.6e-135 486.9 669 43.2
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 2.6e-135 486.9 432 56.0
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 4.5e-135 486.1 433 54.7
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 4.5e-135 486.1 720 44.0
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 5.9e-135 485.7 584 49.1
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 7.7e-135 485.3 402 58.7
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.0e-134 485.0 672 44.2
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.0e-134 485.0 638 45.8
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 1.3e-134 484.6 577 48.7
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 5.0e-134 482.6 715 44.2
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 6.5e-134 482.3 572 47.4
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.1e-133 481.5 396 58.1
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.1e-133 481.5 597 47.2
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 1.4e-133 481.1 415 57.8
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 2.5e-133 480.3 662 44.7
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 2.5e-133 480.3 583 48.7
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 5.5e-133 479.2 423 54.6
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 7.2e-133 478.8 706 42.8
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 7.2e-133 478.8 399 57.1
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 9.4e-133 478.4 399 56.4
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.6e-132 477.6 636 45.8
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.1e-132 477.2 407 57.5
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 2.1e-132 477.2 407 57.5
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 2.1e-132 477.2 586 46.4
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 2.7e-132 476.9 690 42.3
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.9e-132 475.3 590 48.5
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 2.3e-131 473.8 675 44.0
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 3.9e-131 473.0 393 56.5
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 5.1e-131 472.6 432 55.3
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 1.1e-130 471.5 587 45.7
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 9.7e-130 468.4 399 55.9
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 1.4e-128 464.5 442 53.8
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 4.1e-128 463.0 435 53.1
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 6.9e-128 462.2 427 53.6
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 9.1e-128 461.8 425 53.2
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.5e-127 461.1 400 55.8
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 1.7e-126 457.6 495 48.3
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.8e-118 429.9 653 43.3
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 4.7e-116 422.9 576 46.7
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.9e-110 403.7 317 58.7
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 8.5e-110 402.1 506 48.6
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 4.2e-101 373.2 261 64.0
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 9.4e-101 372.1 468 47.4
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 5.9e-95 352.8 259 64.5
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 7.5e-82 309.3 482 43.2
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.9e-80 304.7 402 48.3
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 8.1e-76 289.3 282 49.6
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.3e-70 271.9 467 38.8
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 7.6e-58 229.6 399 38.1
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.8e-51 208.4 300 41.0
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 1.5e-42 178.7 133 60.2
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 6.0e-39 166.8 75 98.7
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 6.0e-31 140.2 376 34.3
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 2.3e-30 138.3 101 59.4
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.8e-28 131.3 230 34.3
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-28 131.0 339 29.8
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.0e-17 96.3 77 54.5
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 6.5e-17 93.6 75 61.3
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 1.9e-16 92.0 63 58.7
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.2e-07 62.8 81 37.0


User provided reference genes

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