Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23896 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.7e-266 922.2 479 100.0
MBI15_g31039_MAGBIO Magnolia biondii HOM05D004172 ORTHO05D006010 1.8e-191 672.9 480 72.9
Aqoxy4G03306 Aquilegia oxysepala HOM05D004172 ORTHO05D006010 8.3e-189 664.1 480 71.2
Nn5g26794 Nelumbo nucifera HOM05D004172 ORTHO05D006010 4.7e-184 648.3 480 70.2
Eucgr.K01297 Eucalyptus grandis HOM05D004172 ORTHO05D006010 2.3e-183 646.0 478 70.3
Dinv16944 Davidia involucrata HOM05D004172 ORTHO05D006010 8.8e-183 644.0 478 69.9
ATR1127G216 Amborella trichopoda HOM05D004172 ORTHO05D006010 2.6e-182 642.5 481 70.1
Rhsim04G0120600 Rhododendron simsii HOM05D004172 ORTHO05D006010 9.8e-182 640.6 478 69.0
Dinv21399 Davidia involucrata HOM05D004172 ORTHO05D006010 2.2e-181 639.4 478 69.5
Manes.09G122000 Manihot esculenta HOM05D004172 ORTHO05D006010 2.8e-181 639.0 478 69.0
Sed0001307 Sechium edule HOM05D004172 ORTHO05D006010 4.9e-181 638.3 478 69.0
CANSAT55G0003 Cannabis sativa HOM05D004172 ORTHO05D006010 6.3e-181 637.9 478 69.2
Hma1.2p1_0106F.1_g051180 Hydrangea macrophylla HOM05D004172 ORTHO05D006010 1.1e-180 637.1 478 69.2
MSTRG.5032 Avicennia marina HOM05D004172 ORTHO05D006010 1.4e-180 636.7 478 69.2
FAN02G3863 Fragaria x ananassa HOM05D004172 ORTHO05D006010 1.4e-180 636.7 478 69.7
PSO017G1041 Papaver somniferum HOM05D004172 ORTHO05D006010 1.4e-180 636.7 478 69.2
RcHm_v2.0_Chr3g0459921 Rosa chinensis HOM05D004172 ORTHO05D006010 1.8e-180 636.3 478 69.2
TWI53G0780 Tripterygium wilfordii HOM05D004172 ORTHO05D006010 3.1e-180 635.6 478 69.2
Os05g0316100 Oryza sativa ssp. japonica HOM05D004172 ORTHO05D006010 5.4e-180 634.8 480 69.2
PSO170G1455 Papaver somniferum HOM05D004172 ORTHO05D006010 5.4e-180 634.8 478 69.0
FAN09G2297 Fragaria x ananassa HOM05D004172 ORTHO05D006010 7.0e-180 634.4 478 69.2
Prupe.6G297500 Prunus persica HOM05D004172 ORTHO05D006010 7.0e-180 634.4 478 69.2
FvH4_6g09450 Fragaria vesca HOM05D004172 ORTHO05D006010 9.1e-180 634.0 478 69.2
SalBow6G2214 Salvia bowleyana HOM05D004172 ORTHO05D006010 9.1e-180 634.0 478 68.6
Cpa.g.sc0.76 Carica papaya HOM05D004172 ORTHO05D006010 1.6e-179 633.3 478 69.0
ClCG04G006210 Citrullus lanatus HOM05D004172 ORTHO05D006010 3.5e-179 632.1 478 68.4
Thecc.04G148100 Theobroma cacao HOM05D004172 ORTHO05D006010 3.5e-179 632.1 478 69.0
MELO3C025255.2 Cucumis melo HOM05D004172 ORTHO05D006010 5.9e-179 631.3 478 68.0
CsaV3_4G027360 Cucumis sativus L. HOM05D004172 ORTHO05D006010 5.9e-179 631.3 478 68.2
Migut.N01780 Erythranthe guttata HOM05D004172 ORTHO05D006010 5.9e-179 631.3 481 68.6
GSVIVG01029868001 Vitis vinifera HOM05D004172 ORTHO05D006010 5.9e-179 631.3 477 68.8
FAN14G3054 Fragaria x ananassa HOM05D004172 ORTHO05D006010 7.7e-179 630.9 478 69.0
Phvul.008G079500 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 1.7e-178 629.8 478 67.4
Glyma.18G217100 Glycine max HOM05D004172 ORTHO05D006010 2.3e-178 629.4 478 67.4
CSS0013897 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 5.0e-178 628.2 478 67.8
Gohir.A02G001800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 5.0e-178 628.2 478 68.2
Glyma.09G271900 Glycine max HOM05D004172 ORTHO05D006010 6.6e-178 627.9 478 67.4
Potri.006G111200 Populus trichocarpa HOM05D004172 ORTHO05D006010 6.6e-178 627.9 478 67.6
PSO502G0022 Papaver somniferum HOM05D004172 ORTHO05D006010 8.6e-178 627.5 478 68.4
PGR004G2490 Punica granatum HOM05D004172 ORTHO05D006010 8.6e-178 627.5 478 68.4
VMungo1383G2431 Vigna mungo HOM05D004172 ORTHO05D006010 1.1e-177 627.1 478 66.9
Manes.08G168300 Manihot esculenta HOM05D004172 ORTHO05D006010 4.2e-177 625.2 478 67.6
Medtr7g074060 Medicago truncatula HOM05D004172 ORTHO05D006010 5.5e-177 624.8 478 67.8
MD12G1192900 Malus domestica HOM05D004172 ORTHO05D006010 7.2e-177 624.4 478 68.2
Psat3g117200 Pisum sativum HOM05D004172 ORTHO05D006010 9.5e-177 624.0 478 67.6
Lalb_Chr07g0195761 Lupinus albus HOM05D004172 ORTHO05D006010 1.2e-176 623.6 478 66.7
Cfa017003 Carpinus fangiana HOM05D004172 ORTHO05D006010 1.6e-176 623.2 480 68.3
Duzib151G0210 Durio zibethinus HOM05D004172 ORTHO05D006010 1.6e-176 623.2 478 67.8
QL07p031284 Quercus lobata HOM05D004172 ORTHO05D006010 1.6e-176 623.2 481 68.8
QL07p031617 Quercus lobata HOM05D004172 ORTHO05D006010 1.6e-176 623.2 479 68.7
TAR633G1329 Trochodendron aralioides HOM05D004172 ORTHO05D006010 2.8e-176 622.5 455 71.0
CiPaw.10G166300 Carya illinoinensis HOM05D004172 ORTHO05D006010 3.6e-176 622.1 479 68.1
Lj1g0013582 Lotus japonicus HOM05D004172 ORTHO05D006010 3.6e-176 622.1 478 67.4
Lj7P587T8 Lonicera japonica HOM05D004172 ORTHO05D006010 1.0e-175 620.5 480 66.9
THA.LOC104806653 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 1.0e-175 620.5 478 68.4
Gohir.D02G002100 Gossypium hirsutum HOM05D004172 ORTHO05D006010 1.4e-175 620.2 478 67.4
VMungo0331G1250 Vigna mungo HOM05D004172 ORTHO05D006010 1.8e-175 619.8 478 66.7
Ca_07790_v3 Cicer arietinum L. HOM05D004172 ORTHO05D006010 2.3e-175 619.4 478 66.7
Gorai.005G002600 Gossypium raimondii HOM05D004172 ORTHO05D006010 2.3e-175 619.4 478 67.4
Atru.chr8.66 Acer truncatum HOM05D004172 ORTHO05D006010 3.0e-175 619.0 479 68.5
Nitab4.5_0000707g0290 Nicotiana tabacum HOM05D004172 ORTHO05D006010 4.0e-175 618.6 478 67.4
Gorai.011G125600 Gossypium raimondii HOM05D004172 ORTHO05D006010 2.0e-174 616.3 478 67.2
Nitab4.5_0006228g0020 Nicotiana tabacum HOM05D004172 ORTHO05D006010 2.0e-174 616.3 478 67.2
Sc20g0007210 Simmondsia chinensis HOM05D004172 ORTHO05D006010 2.0e-174 616.3 479 67.2
CAN.G219.48 Capsicum annuum HOM05D004172 ORTHO05D006010 2.6e-174 615.9 480 67.5
CARHR082950 Cardamine hirsuta HOM05D004172 ORTHO05D006010 2.6e-174 615.9 479 67.4
MD04G1177600 Malus domestica HOM05D004172 ORTHO05D006010 2.6e-174 615.9 483 67.1
Solyc01g087530.3 Solanum lycopersicum HOM05D004172 ORTHO05D006010 2.6e-174 615.9 480 67.5
Sopen01g034500 Solanum pennellii HOM05D004172 ORTHO05D006010 2.6e-174 615.9 480 67.5
PGSC0003DMG400006857 Solanum tuberosum HOM05D004172 ORTHO05D006010 2.6e-174 615.9 480 67.5
Gohir.D10G113800 Gossypium hirsutum HOM05D004172 ORTHO05D006010 4.4e-174 615.1 478 66.7
Peaxi162Scf00019g00011 Petunia axillaris HOM05D004172 ORTHO05D006010 4.4e-174 615.1 478 67.4
Phvul.010G059200 Phaseolus vulgaris HOM05D004172 ORTHO05D006010 4.4e-174 615.1 478 66.5
arahy.Tifrunner.gnm1.ann1.5JF3JJ Arachis hypogaea HOM05D004172 ORTHO05D006010 7.5e-174 614.4 477 66.2
arahy.Tifrunner.gnm1.ann1.SQ7DBT Arachis hypogaea HOM05D004172 ORTHO05D006010 7.5e-174 614.4 477 66.2
CDE09G1233 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 7.5e-174 614.4 478 68.4
Ciclev10011331m.g Citrus clementina HOM05D004172 ORTHO05D006010 7.5e-174 614.4 478 66.5
Aa31LG5G18700 Aethionema arabicum HOM05D004172 ORTHO05D006010 9.8e-174 614.0 478 66.9
BcaB04g21247 Brassica carinata HOM05D004172 ORTHO05D006010 9.8e-174 614.0 479 67.4
Oeu006559.1 Olea europaea HOM05D004172 ORTHO05D006010 9.8e-174 614.0 499 66.3
arahy.Tifrunner.gnm1.ann1.3N9KBA Arachis hypogaea HOM05D004172 ORTHO05D006010 1.7e-173 613.2 477 66.0
arahy.Tifrunner.gnm1.ann1.VH0VRX Arachis hypogaea HOM05D004172 ORTHO05D006010 2.2e-173 612.8 477 65.8
Gohir.A10G152400 Gossypium hirsutum HOM05D004172 ORTHO05D006010 6.3e-173 611.3 478 66.3
Carub.0003s0778 Capsella rubella HOM05D004172 ORTHO05D006010 8.3e-173 610.9 479 67.0
Cc02_g28240 Coffea canephora HOM05D004172 ORTHO05D006010 8.3e-173 610.9 478 66.3
BcaC09g47981 Brassica carinata HOM05D004172 ORTHO05D006010 1.1e-172 610.5 479 67.2
BolC1t05497H Brassica oleracea HOM05D004172 ORTHO05D006010 1.1e-172 610.5 479 67.2
BraA03t12811Z Brassica rapa HOM05D004172 ORTHO05D006010 3.2e-172 609.0 479 66.4
AUR62029801 Chenopodium quinoa HOM05D004172 ORTHO05D006010 3.2e-172 609.0 478 65.3
Lalb_Chr01g0023931 Lupinus albus HOM05D004172 ORTHO05D006010 3.2e-172 609.0 479 66.0
AT3G08650 Arabidopsis thaliana HOM05D004172 ORTHO05D006010 7.0e-172 607.8 479 66.8
Thhalv10020349m.g Eutrema salsugineum HOM05D004172 ORTHO05D006010 7.0e-172 607.8 479 67.0
AL3G19650 Arabidopsis lyrata HOM05D004172 ORTHO05D006010 9.2e-172 607.4 479 66.6
ECA248G2273 Erigeron canadensis HOM05D004172 ORTHO05D006010 9.2e-172 607.4 477 65.4
BNapus_Darmor_BZH_scaffold_167p00070 Brassica napus HOM05D004172 ORTHO05D006010 1.2e-171 607.1 479 67.2
BolC3t16675H Brassica oleracea HOM05D004172 ORTHO05D006010 1.2e-171 607.1 479 66.4
A03p36430 Brassica napus HOM05D004172 ORTHO05D006010 1.6e-171 606.7 479 66.0
AUR62006448 Chenopodium quinoa HOM05D004172 ORTHO05D006010 1.6e-171 606.7 477 65.2
TPR.G24292 Trifolium pratense HOM05D004172 ORTHO05D006010 1.6e-171 606.7 478 66.3
HPP92_026424 Vanilla planifolia HOM05D004172 ORTHO05D006010 1.6e-171 606.7 477 65.4
Sp3g07090 Schrenkiella parvula HOM05D004172 ORTHO05D006010 2.7e-171 605.9 479 66.8
C05p59200 Brassica napus HOM05D004172 ORTHO05D006010 4.6e-171 605.1 479 66.2
Sabra04G0157100 Salix brachista HOM05D004172 ORTHO05D006010 7.8e-171 604.4 514 63.2
Ah.15g089820 Amaranthus hybridus HOM05D004172 ORTHO05D006010 1.0e-170 604.0 478 64.4
DCAR_029461 Daucus carota HOM05D004172 ORTHO05D006010 1.3e-170 603.6 480 67.5
EL10Ac7g17137 Beta vulgaris HOM05D004172 ORTHO05D006010 2.3e-170 602.8 478 64.9
A05p40120 Brassica napus HOM05D004172 ORTHO05D006010 2.3e-170 602.8 479 66.0
THA.LOC104823330 Tarenaya hassleriana HOM05D004172 ORTHO05D006010 2.9e-170 602.4 478 66.5
TAR636G0443 Trochodendron aralioides HOM05D004172 ORTHO05D006010 2.9e-170 602.4 478 67.6
BcaC05g29600 Brassica carinata HOM05D004172 ORTHO05D006010 8.6e-170 600.9 478 66.3
Hund03687 Selenicereus undatus HOM05D004172 ORTHO05D006010 1.1e-169 600.5 480 65.8
BolC5t34577H Brassica oleracea HOM05D004172 ORTHO05D006010 1.5e-169 600.1 479 65.1
Zm00001eb408330 Zea mays HOM05D004172 ORTHO05D006010 1.6e-168 596.7 480 66.7
Actinidia20804 Actinidia chinensis HOM05D004172 ORTHO05D006010 8.0e-168 594.3 478 65.7
BcaC01g04188 Brassica carinata HOM05D004172 ORTHO05D006010 2.2e-165 586.3 479 64.7
Oeu049006.1 Olea europaea HOM05D004172 ORTHO05D006010 2.2e-165 586.3 487 64.1
CDE08G0114 Ceratophyllum demersum HOM05D004172 ORTHO05D006010 6.4e-165 584.7 440 69.8
Sabra06G0086400 Salix brachista HOM05D004172 ORTHO05D006010 8.3e-165 584.3 583 55.6
Haze_21203 Corylus avellana HOM05D004172 ORTHO05D006010 1.1e-164 583.9 579 56.6
SHI12946 Sapria himalayana HOM05D004172 ORTHO05D006010 6.8e-159 564.7 483 62.3
SMO337G0001 Selaginella moellendorffii HOM05D004172 ORTHO05D006010 1.5e-158 563.5 483 64.0
Lsat_1_v5_gn_1_105840 Lactuca sativa HOM05D004172 ORTHO05D006010 1.2e-150 537.3 481 59.7
HanXRQChr01g0016071 Helianthus annuus HOM05D004172 ORTHO05D006010 4.9e-149 531.9 432 64.8
vmacro08954 Vaccinium macrocarpon HOM05D004172 ORTHO05D006010 5.8e-142 508.4 506 57.7
unitig_747.g21293 Utricularia gibba HOM05D004172 ORTHO05D006010 1.9e-140 503.4 394 65.7
Pp3c6_18720 Physcomitrium patens HOM05D004172 ORTHO05D006010 8.7e-138 494.6 474 55.3
Potri.016G140500 Populus trichocarpa HOM05D004172 ORTHO05D006010 4.2e-132 475.7 478 55.4
BraA01t04334Z Brassica rapa HOM05D004172 ORTHO05D006010 2.1e-120 436.8 371 63.3
C03p44040 Brassica napus HOM05D004172 ORTHO05D006010 1.0e-106 391.3 265 74.0
Mapoly0092s0078 Marchantia polymorpha HOM05D004172 ORTHO05D006010 4.1e-103 379.4 469 45.8
Actinidia32576 Actinidia chinensis HOM05D004172 ORTHO05D006010 7.7e-102 375.2 399 53.4
CiPaw.09G223100 Carya illinoinensis HOM05D004172 ORTHO05D006010 1.3e-101 374.4 460 51.3
CSS0016172 Camellia sinensis var. sinensis HOM05D004172 ORTHO05D006010 3.3e-89 333.2 323 57.3
SGA_v2.0_scaffold5G02963 Striga asiatica HOM05D004172 ORTHO05D006010 2.2e-88 330.5 201 82.1
COL.COLO4_05675 Corchorus olitorius HOM05D004172 ORTHO05D006010 8.5e-85 318.5 215 74.0
CBR_g164 Chara braunii HOM05D004172 ORTHO05D006010 1.9e-84 317.4 510 41.0
BcaB04g18578 Brassica carinata HOM05D004172 ORTHO05D006010 6.1e-67 259.2 162 76.5
SEGI_22351 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.8e-66 257.7 132 100.0
Actinidia28546 Actinidia chinensis HOM05D004172 ORTHO05D006010 6.8e-66 255.8 221 62.9
SEGI_04146 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 2.2e-64 250.8 205 71.2
C03p44050 Brassica napus HOM05D004172 ORTHO05D006010 1.8e-55 221.1 201 58.7
MCO09G526 Micromonas commoda HOM05D004172 ORTHO05D006010 5.9e-54 216.1 194 56.2
Cre06.g281900 Chlamydomonas reinhardtii HOM05D004172 ORTHO05D006010 1.8e-50 204.5 308 40.3
PRCOL_00003523 Prasinoderma coloniale HOM05D004172 ORTHO05D006010 4.9e-40 169.9 216 44.0
HanXRQChr04g0127351 Helianthus annuus HOM05D004172 ORTHO05D006010 1.9e-28 131.3 137 51.1
Medtr3g094870 Medicago truncatula HOM05D004172 ORTHO05D006010 1.5e-20 105.1 64 76.6
SEGI_20309 Sequoiadendron giganteum HOM05D004172 ORTHO05D006010 1.4e-18 98.6 64 82.8
QL07p004777 Quercus lobata HOM05D004172 ORTHO05D039478 3.0e-13 80.9 146 43.8
HanXRQChr11g0335241 Helianthus annuus HOM05D004172 ORTHO05D006010 8.7e-13 79.3 65 63.1
Actinidia32575 Actinidia chinensis HOM05D004172 ORTHO05D006010 4.5e-09 67.0 40 72.5
TAR633G1452 Trochodendron aralioides HOM05D004172 ORTHO05D414170 4.5e-09 67.0 57 54.4
BcaC02g10326 Brassica carinata HOM05D004172 ORTHO05D023965 6.0e-06 56.6 69 44.9


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