Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.5e-68 262.7 127 100.0
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 7.2e-15 84.3 114 39.5
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.1e-14 82.8 111 38.7
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 2.7e-14 82.4 110 40.0
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 3.6e-14 82.0 111 39.6
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 3.6e-14 82.0 111 38.7
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 3.6e-14 82.0 109 35.8
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.4e-13 80.1 110 39.1
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.4e-13 80.1 123 35.0
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.4e-13 80.1 110 39.1
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.8e-13 79.7 112 38.4
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 2.3e-13 79.3 111 36.9
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 2.3e-13 79.3 110 39.1
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.3e-13 79.3 111 37.8
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 2.3e-13 79.3 110 36.4
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.0e-13 79.0 110 34.5
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 3.0e-13 79.0 113 34.5
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.0e-13 79.0 112 35.7
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 3.9e-13 78.6 110 36.4
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 3.9e-13 78.6 112 37.5
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 6.7e-13 77.8 110 36.4
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 6.7e-13 77.8 110 34.5
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 8.8e-13 77.4 111 36.0
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 1.1e-12 77.0 111 36.0
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.1e-12 77.0 114 36.0
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.1e-12 77.0 109 34.9
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.1e-12 77.0 110 34.5
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.9e-12 76.3 111 36.9
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.9e-12 76.3 111 36.0
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 3.3e-12 75.5 75 45.3
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 3.3e-12 75.5 113 34.5
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 4.3e-12 75.1 110 34.5
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 4.3e-12 75.1 113 35.4
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 5.7e-12 74.7 110 35.5
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 5.7e-12 74.7 111 38.7
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 7.4e-12 74.3 110 36.4
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 7.4e-12 74.3 65 50.8
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 9.7e-12 73.9 111 34.2
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.7e-11 73.2 114 36.8
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.7e-11 73.2 107 38.3
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.7e-11 73.2 111 35.1
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.7e-11 73.2 68 47.1
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 2.2e-11 72.8 113 34.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.2e-11 72.8 67 49.3
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.2e-11 72.8 113 35.4
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.2e-11 72.8 111 35.1
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.2e-11 72.8 67 50.7
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.8e-11 72.4 111 35.1
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 3.7e-11 72.0 112 33.0
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 3.7e-11 72.0 110 35.5
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 3.7e-11 72.0 114 36.8
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 3.7e-11 72.0 67 47.8
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 4.8e-11 71.6 110 34.5
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 4.8e-11 71.6 110 35.5
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 4.8e-11 71.6 77 46.8
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 4.8e-11 71.6 77 46.8
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 6.3e-11 71.2 111 34.2
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.3e-11 71.2 67 47.8
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 8.2e-11 70.9 111 34.2
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 8.2e-11 70.9 110 34.5
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 8.2e-11 70.9 127 34.6
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 8.2e-11 70.9 70 48.6
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.1e-10 70.5 110 34.5
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.1e-10 70.5 112 37.5
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.4e-10 70.1 110 35.5
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.4e-10 70.1 111 36.0
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.4e-10 69.3 67 46.3
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 2.4e-10 69.3 113 32.7
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.1e-10 68.9 111 34.2
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 3.1e-10 68.9 127 34.6
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 3.1e-10 68.9 111 34.2
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 4.1e-10 68.6 119 33.6
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 4.1e-10 68.6 119 33.6
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.3e-10 68.2 126 30.2
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 5.3e-10 68.2 111 33.3
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 5.3e-10 68.2 111 33.3
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 6.9e-10 67.8 118 36.4
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 6.9e-10 67.8 130 31.5
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 9.1e-10 67.4 101 36.6
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 9.1e-10 67.4 89 39.3
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.2e-09 67.0 111 33.3
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.2e-09 67.0 92 38.0
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.5e-09 66.6 114 28.9
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 1.5e-09 66.6 90 41.1
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.5e-09 66.6 129 34.1
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 2.0e-09 66.2 101 37.6
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 2.0e-09 66.2 101 37.6
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.0e-09 66.2 105 34.3
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.6e-09 65.9 116 33.6
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.6e-09 65.9 84 40.5
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.5e-09 65.1 67 47.8
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 5.9e-09 64.7 89 38.2
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 5.9e-09 64.7 89 38.2
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.0e-08 63.9 110 31.8
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.9e-08 62.4 110 30.0
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.9e-08 62.4 111 29.7


User provided reference genes

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