Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23779 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 3.4e-59 231.5 120 100.0
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 1.8e-31 139.4 119 58.0
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 1.1e-30 136.7 119 54.6
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 1.1e-30 136.7 116 58.6
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 5.7e-30 134.4 119 55.5
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 5.7e-30 134.4 116 56.9
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 1.3e-29 133.3 119 57.1
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.2e-29 132.5 119 54.6
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 2.8e-29 132.1 119 53.8
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.8e-28 129.4 122 54.1
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 1.8e-28 129.4 119 52.1
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 3.1e-28 128.6 115 53.9
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 5.3e-28 127.9 113 54.9
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 7.0e-28 127.5 113 53.1
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 7.0e-28 127.5 116 54.3
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 9.1e-28 127.1 120 54.2
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 9.1e-28 127.1 119 55.5
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 1.6e-27 126.3 119 52.9
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 2.0e-27 125.9 119 51.3
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 2.6e-27 125.6 115 53.9
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 2.6e-27 125.6 129 48.1
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 3.5e-27 125.2 119 52.9
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 3.5e-27 125.2 119 51.3
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 4.5e-27 124.8 106 56.6
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 4.5e-27 124.8 119 51.3
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 5.9e-27 124.4 119 52.1
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 5.9e-27 124.4 114 56.1
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 7.7e-27 124.0 119 52.1
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 7.7e-27 124.0 103 57.3
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 7.7e-27 124.0 113 54.0
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.0e-26 123.6 119 51.3
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 1.3e-26 123.2 116 51.7
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 1.3e-26 123.2 113 53.1
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 1.3e-26 123.2 119 50.4
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 1.3e-26 123.2 119 51.3
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 1.7e-26 122.9 119 51.3
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 2.2e-26 122.5 116 51.7
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 2.2e-26 122.5 117 50.4
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.9e-26 122.1 119 51.3
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 5.0e-26 121.3 119 50.4
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 5.0e-26 121.3 118 49.2
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 5.0e-26 121.3 116 51.7
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 8.5e-26 120.6 117 50.4
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 1.1e-25 120.2 118 48.3
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 1.5e-25 119.8 119 48.7
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.5e-25 119.8 116 52.6
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 1.9e-25 119.4 119 45.4
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 2.5e-25 119.0 116 51.7
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 4.2e-25 118.2 118 51.7
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 5.5e-25 117.9 119 51.3
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 7.2e-25 117.5 111 55.9
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 9.4e-25 117.1 118 50.8
Sabra03G0029200 Salix brachista HOM05D002451 ORTHO05D005601 9.4e-25 117.1 153 42.5
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 9.4e-25 117.1 116 50.0
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 1.2e-24 116.7 118 45.8
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 1.6e-24 116.3 113 51.3
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.6e-24 116.3 113 50.4
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 1.6e-24 116.3 118 49.2
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.6e-24 116.3 118 46.6
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 2.1e-24 115.9 113 50.4
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 2.7e-24 115.5 118 50.8
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 3.6e-24 115.2 118 48.3
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 3.6e-24 115.2 118 46.6
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 4.7e-24 114.8 118 49.2
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 4.7e-24 114.8 118 50.0
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.1e-24 114.4 115 52.2
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 1.0e-23 113.6 118 45.8
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.0e-23 113.6 118 48.3
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 1.4e-23 113.2 118 48.3
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 1.8e-23 112.8 116 48.3
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 1.8e-23 112.8 117 47.0
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 2.3e-23 112.5 119 47.1
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 3.0e-23 112.1 119 47.1
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 4.0e-23 111.7 116 49.1
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 4.0e-23 111.7 117 49.6
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 4.0e-23 111.7 118 47.5
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 5.2e-23 111.3 109 52.3
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 8.8e-23 110.5 118 46.6
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 1.2e-22 110.2 119 46.2
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 1.2e-22 110.2 119 46.2
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 1.2e-22 110.2 119 46.2
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 1.2e-22 110.2 113 50.4
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.5e-22 109.8 118 46.6
HPP92_007773 Vanilla planifolia HOM05D002451 ORTHO05D005601 2.0e-22 109.4 109 51.4
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 2.6e-22 109.0 119 47.9
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 7.5e-22 107.5 119 46.2
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 7.5e-22 107.5 112 50.0
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.8e-21 105.5 104 53.8
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 4.8e-21 104.8 115 46.1
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 7.0e-20 100.9 108 49.1
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 1.6e-19 99.8 109 47.7
Aa31LG9G10320 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.9e-18 95.5 123 43.1
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 5.0e-18 94.7 116 38.8
unitig_88.g27602 Utricularia gibba HOM05D002451 ORTHO05D005601 5.0e-18 94.7 127 38.6
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 8.0e-16 87.4 104 42.3
EL10Ac9g21205 Beta vulgaris HOM05D002451 ORTHO05D005601 5.2e-15 84.7 117 39.3
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 3.4e-14 82.0 93 46.2
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 3.5e-11 72.0 108 43.5
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 5.9e-11 71.2 108 42.6
Peaxi162Scf00038g01031 Petunia axillaris HOM05D002451 ORTHO05D005601 5.9e-11 71.2 53 62.3
Zm00001eb029900 Zea mays HOM05D002451 ORTHO05D005601 1.5e-09 66.6 90 41.1
TPR.G18835 Trifolium pratense HOM05D002451 ORTHO05D005601 1.9e-09 66.2 64 46.9
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 9.8e-06 53.9 112 35.7


User provided reference genes

Program Settings