Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 5.8e-71 270.8 137 100.0
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 7.2e-37 157.5 128 62.5
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 9.4e-37 157.1 126 62.7
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 2.1e-36 156.0 128 60.9
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 2.7e-36 155.6 126 64.3
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 3.0e-35 152.1 107 68.2
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 6.7e-35 151.0 108 69.4
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 8.8e-35 150.6 106 68.9
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 1.1e-34 150.2 108 69.4
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.1e-34 150.2 107 68.2
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 1.5e-34 149.8 108 69.4
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 2.0e-34 149.4 110 68.2
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 2.0e-34 149.4 107 68.2
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 2.0e-34 149.4 111 61.3
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 2.0e-34 149.4 107 66.4
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 3.3e-34 148.7 108 67.6
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 3.3e-34 148.7 108 68.5
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 4.4e-34 148.3 108 65.7
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 4.4e-34 148.3 120 59.2
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.4e-34 148.3 116 64.7
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 4.4e-34 148.3 108 68.5
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 7.4e-34 147.5 107 66.4
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 9.7e-34 147.1 108 67.6
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 9.7e-34 147.1 108 67.6
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 9.7e-34 147.1 107 66.4
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.3e-33 146.7 108 68.5
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 1.3e-33 146.7 108 67.6
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 1.7e-33 146.4 108 66.7
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 1.7e-33 146.4 108 67.6
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 2.2e-33 146.0 112 67.0
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 2.2e-33 146.0 108 67.6
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 3.7e-33 145.2 107 65.4
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 3.7e-33 145.2 109 66.1
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 3.7e-33 145.2 106 68.9
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 3.7e-33 145.2 107 65.4
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 3.7e-33 145.2 106 68.9
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 4.8e-33 144.8 106 67.9
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 6.3e-33 144.4 107 66.4
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 8.2e-33 144.1 116 63.8
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 8.2e-33 144.1 107 66.4
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 8.2e-33 144.1 113 64.6
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 1.1e-32 143.7 109 66.1
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 1.1e-32 143.7 115 64.3
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 1.8e-32 142.9 106 64.2
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 1.8e-32 142.9 108 66.7
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 2.4e-32 142.5 106 66.0
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 2.4e-32 142.5 109 67.0
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 2.4e-32 142.5 106 67.9
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 2.4e-32 142.5 103 68.9
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 2.4e-32 142.5 107 65.4
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 3.1e-32 142.1 107 67.3
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 5.3e-32 141.4 106 67.9
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 7.0e-32 141.0 109 64.2
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 7.0e-32 141.0 110 64.5
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 7.0e-32 141.0 106 64.2
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 9.1e-32 140.6 106 67.0
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 9.1e-32 140.6 107 66.4
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 9.1e-32 140.6 106 66.0
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 1.2e-31 140.2 116 59.5
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 2.0e-31 139.4 106 66.0
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 2.0e-31 139.4 107 66.4
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 2.0e-31 139.4 107 66.4
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 2.0e-31 139.4 110 62.7
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 2.6e-31 139.0 108 64.8
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 2.6e-31 139.0 106 66.0
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 2.6e-31 139.0 107 63.6
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 4.5e-31 138.3 106 63.2
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 4.5e-31 138.3 108 63.0
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 5.9e-31 137.9 96 67.7
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 5.9e-31 137.9 106 65.1
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 5.9e-31 137.9 106 63.2
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 5.9e-31 137.9 107 64.5
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 7.7e-31 137.5 106 62.3
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 7.7e-31 137.5 106 62.3
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 7.7e-31 137.5 108 62.0
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 7.7e-31 137.5 107 66.4
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 7.7e-31 137.5 116 56.9
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.0e-30 137.1 107 63.6
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 1.3e-30 136.7 106 62.3
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.7e-30 136.3 107 64.5
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 1.7e-30 136.3 106 63.2
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 2.9e-30 135.6 114 58.8
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 3.8e-30 135.2 119 58.0
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 8.5e-30 134.0 105 61.0
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 1.9e-29 132.9 108 63.0
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 4.2e-29 131.7 106 61.3
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 4.2e-29 131.7 109 60.6
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 4.2e-29 131.7 106 61.3
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 1.2e-28 130.2 107 61.7
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 1.6e-28 129.8 107 58.9
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 2.7e-28 129.0 121 56.2
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 3.6e-28 128.6 107 60.7
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 3.6e-28 128.6 107 60.7
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 3.6e-28 128.6 107 60.7
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 3.6e-28 128.6 107 60.7
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 4.7e-28 128.3 109 59.6
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 6.1e-28 127.9 107 60.7
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 6.1e-28 127.9 107 60.7
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 8.0e-28 127.5 109 57.8
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 1.0e-27 127.1 105 61.9
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 1.0e-27 127.1 99 61.6
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 2.3e-27 125.9 107 60.7
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 3.0e-27 125.6 106 57.5
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 3.0e-27 125.6 103 61.2
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 3.9e-27 125.2 107 59.8
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 6.7e-27 124.4 127 52.0
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 1.1e-26 123.6 107 58.9
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 1.1e-26 123.6 103 60.2
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 3.3e-26 122.1 139 48.9
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 1.3e-25 120.2 139 44.6
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 2.8e-25 119.0 99 57.6
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 9.1e-24 114.0 78 67.9
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 1.2e-23 113.6 131 48.9
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 2.2e-22 109.4 81 65.4
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 3.8e-22 108.6 73 74.0
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 8.5e-22 107.5 189 40.2
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 4.2e-21 105.1 66 74.2
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 4.2e-21 105.1 111 52.3
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.2e-20 103.6 82 59.8
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 2.1e-20 102.8 79 65.8
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 2.7e-20 102.4 74 66.2
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 2.7e-20 102.4 74 66.2
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 6.1e-20 101.3 81 59.3
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 4.4e-18 95.1 65 73.8
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 5.7e-18 94.7 65 73.8
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 9.7e-18 94.0 72 59.7
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 4.8e-17 91.7 80 58.8
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 1.0e-14 84.0 64 67.2
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 5.0e-14 81.6 62 62.9
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 6.1e-12 74.7 59 64.4
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 8.0e-12 74.3 57 63.2
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 8.8e-11 70.9 55 60.0
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 7.5e-10 67.8 55 60.0
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 5.4e-08 61.6 68 47.1
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 8.6e-06 54.3 38 65.8


User provided reference genes

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