Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23766 Sequoiadendron giganteum HOM05D002504 ORTHO05D007332 7.1e-83 310.5 146 100.0
Ciclev10019562m.g Citrus clementina HOM05D002504 ORTHO05D007332 6.1e-26 121.3 115 52.2
Phvul.003G192100 Phaseolus vulgaris HOM05D002504 ORTHO05D007332 7.9e-26 120.9 99 57.6
AagrBONN_evm.TU.Sc2ySwM_228.5522 Anthoceros agrestis HOM05D002504 ORTHO05D007332 1.8e-25 119.8 85 61.2
Atru.chr9.2306 Acer truncatum HOM05D002504 ORTHO05D007332 2.3e-25 119.4 85 62.4
Glyma.17G097700 Glycine max HOM05D002504 ORTHO05D007332 2.3e-25 119.4 114 52.6
Glyma.17G097800 Glycine max HOM05D002504 ORTHO05D007332 2.3e-25 119.4 118 51.7
Cpa.g.sc17.219 Carica papaya HOM05D002504 ORTHO05D007332 3.0e-25 119.0 119 51.3
Glyma.05G029200 Glycine max HOM05D002504 ORTHO05D007332 5.1e-25 118.2 114 51.8
CAN.G628.36 Capsicum annuum HOM05D002504 ORTHO05D007332 1.1e-24 117.1 85 62.4
Lj4g0024401 Lotus japonicus HOM05D002504 ORTHO05D007332 1.5e-24 116.7 85 65.9
Cfa018980 Carpinus fangiana HOM05D002504 ORTHO05D007332 2.0e-24 116.3 85 60.0
Ca_21843_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007332 2.0e-24 116.3 85 60.0
ATR1120G185 Amborella trichopoda HOM05D002504 ORTHO05D007332 2.6e-24 115.9 85 61.2
CiPaw.11G039500 Carya illinoinensis HOM05D002504 ORTHO05D007332 2.6e-24 115.9 85 58.8
Prupe.5G187700 Prunus persica HOM05D002504 ORTHO05D007332 2.6e-24 115.9 115 51.3
QL10p015763 Quercus lobata HOM05D002504 ORTHO05D007332 2.6e-24 115.9 91 58.2
VMungo1215G3404 Vigna mungo HOM05D002504 ORTHO05D007332 3.3e-24 115.5 115 51.3
Glyma.05G029100 Glycine max HOM05D002504 ORTHO05D007332 4.4e-24 115.2 85 61.2
HanXRQChr02g0045291 Helianthus annuus HOM05D002504 ORTHO05D007332 4.4e-24 115.2 85 61.2
Nitab4.5_0007394g0020 Nicotiana tabacum HOM05D002504 ORTHO05D007332 5.7e-24 114.8 85 60.0
TPR.G28161 Trifolium pratense HOM05D002504 ORTHO05D007332 5.7e-24 114.8 85 57.6
TPR.G38417 Trifolium pratense HOM05D002504 ORTHO05D007332 5.7e-24 114.8 85 57.6
Nitab4.5_0000269g0160 Nicotiana tabacum HOM05D002504 ORTHO05D007332 7.4e-24 114.4 85 60.0
Solyc06g071000.3 Solanum lycopersicum HOM05D002504 ORTHO05D007332 7.4e-24 114.4 87 58.6
Lsat_1_v5_gn_1_10981 Lactuca sativa HOM05D002504 ORTHO05D007332 9.7e-24 114.0 94 55.3
PGSC0003DMG400033072 Solanum tuberosum HOM05D002504 ORTHO05D007332 9.7e-24 114.0 90 58.9
CSS0027489 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007332 1.3e-23 113.6 87 58.6
THA.LOC104821429 Tarenaya hassleriana HOM05D002504 ORTHO05D007332 1.3e-23 113.6 114 49.1
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 1.7e-23 113.2 88 58.0
Gohir.A03G065300 Gossypium hirsutum HOM05D002504 ORTHO05D007332 1.7e-23 113.2 115 49.6
Gohir.D03G091600 Gossypium hirsutum HOM05D002504 ORTHO05D007332 1.7e-23 113.2 115 49.6
Gorai.003G095000 Gossypium raimondii HOM05D002504 ORTHO05D007332 1.7e-23 113.2 115 49.6
MD06G1189000 Malus domestica HOM05D002504 ORTHO05D007332 1.7e-23 113.2 115 49.6
Sopen06g027300 Solanum pennellii HOM05D002504 ORTHO05D007332 1.7e-23 113.2 85 60.0
CANSAT01G1674 Cannabis sativa HOM05D002504 ORTHO05D007332 2.2e-23 112.8 91 56.0
Sc12g0006220 Simmondsia chinensis HOM05D002504 ORTHO05D007332 2.2e-23 112.8 114 53.5
Psat4g053760 Pisum sativum HOM05D002504 ORTHO05D007332 2.8e-23 112.5 116 50.9
Rhsim08G0159000 Rhododendron simsii HOM05D002504 ORTHO05D007332 2.8e-23 112.5 87 57.5
MD14G1196000 Malus domestica HOM05D002504 ORTHO05D007332 3.7e-23 112.1 115 49.6
Sp2g25700 Schrenkiella parvula HOM05D002504 ORTHO05D007332 3.7e-23 112.1 114 47.4
Hund09366 Selenicereus undatus HOM05D002504 ORTHO05D007332 3.7e-23 112.1 91 54.9
arahy.Tifrunner.gnm1.ann1.0II3I9 Arachis hypogaea HOM05D002504 ORTHO05D007332 4.8e-23 111.7 85 58.8
arahy.Tifrunner.gnm1.ann1.77YH77 Arachis hypogaea HOM05D002504 ORTHO05D007332 4.8e-23 111.7 85 58.8
Thecc.03G080800 Theobroma cacao HOM05D002504 ORTHO05D007332 4.8e-23 111.7 91 54.9
HPP92_007639 Vanilla planifolia HOM05D002504 ORTHO05D007332 4.8e-23 111.7 87 57.5
TWI15G0064 Tripterygium wilfordii HOM05D002504 ORTHO05D007332 6.3e-23 111.3 91 54.9
TAR622G0396 Trochodendron aralioides HOM05D002504 ORTHO05D007332 6.3e-23 111.3 85 57.6
Aa31LG11G1110 Aethionema arabicum HOM05D002504 ORTHO05D007332 8.2e-23 110.9 114 49.1
Potri.015G064200 Populus trichocarpa HOM05D002504 ORTHO05D007332 1.1e-22 110.5 85 57.6
SalBow5G0936 Salvia bowleyana HOM05D002504 ORTHO05D007332 1.1e-22 110.5 85 60.0
SalBow5G1952 Salvia bowleyana HOM05D002504 ORTHO05D007332 1.1e-22 110.5 85 60.0
CsaV3_1G007880 Cucumis sativus L. HOM05D002504 ORTHO05D007332 1.4e-22 110.2 85 55.3
HanXRQChr09g0271081 Helianthus annuus HOM05D002504 ORTHO05D007332 1.4e-22 110.2 99 52.5
RcHm_v2.0_Chr7g0180721 Rosa chinensis HOM05D002504 ORTHO05D007332 1.4e-22 110.2 85 58.8
Duzib205G1248 Durio zibethinus HOM05D002504 ORTHO05D007332 1.8e-22 109.8 114 46.5
FvH4_5g15350 Fragaria vesca HOM05D002504 ORTHO05D007332 1.8e-22 109.8 85 57.6
FAN18G3736 Fragaria x ananassa HOM05D002504 ORTHO05D007332 1.8e-22 109.8 85 57.6
Hma1.2p1_0002F.1_g003110 Hydrangea macrophylla HOM05D002504 ORTHO05D007332 1.8e-22 109.8 87 55.2
Medtr4g107940 Medicago truncatula HOM05D002504 ORTHO05D007332 1.8e-22 109.8 85 56.5
PGR083G0441 Punica granatum HOM05D002504 ORTHO05D007332 1.8e-22 109.8 85 57.6
MSTRG.11396 Avicennia marina HOM05D002504 ORTHO05D007332 2.4e-22 109.4 94 56.4
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 2.4e-22 109.4 87 56.3
Hma1.2p1_0002F.1_g003120 Hydrangea macrophylla HOM05D002504 ORTHO05D007332 2.4e-22 109.4 85 56.5
PSO017G0663 Papaver somniferum HOM05D002504 ORTHO05D007332 2.4e-22 109.4 85 57.6
Migut.M00130 Erythranthe guttata HOM05D002504 ORTHO05D007332 3.1e-22 109.0 85 60.0
Os05g0536400 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007332 3.1e-22 109.0 95 53.7
Peaxi162Scf00013g00037 Petunia axillaris HOM05D002504 ORTHO05D007332 3.1e-22 109.0 82 59.8
GSVIVG01008047001 Vitis vinifera HOM05D002504 ORTHO05D007332 4.1e-22 108.6 104 49.0
EL10Ac5g10953 Beta vulgaris HOM05D002504 ORTHO05D007332 5.3e-22 108.2 85 57.6
FAN13G2486 Fragaria x ananassa HOM05D002504 ORTHO05D007332 7.0e-22 107.8 85 56.5
Eucgr.B00436 Eucalyptus grandis HOM05D002504 ORTHO05D007332 9.1e-22 107.5 87 56.3
FAN04G0870 Fragaria x ananassa HOM05D002504 ORTHO05D007332 9.1e-22 107.5 85 56.5
Lj9C460G15 Lonicera japonica HOM05D002504 ORTHO05D007332 9.1e-22 107.5 87 51.7
Lalb_Chr13g0303401 Lupinus albus HOM05D002504 ORTHO05D007332 9.1e-22 107.5 79 62.0
ClCG01G014440 Citrullus lanatus HOM05D002504 ORTHO05D007332 1.2e-21 107.1 85 54.1
Haze_07366 Corylus avellana HOM05D002504 ORTHO05D007332 1.2e-21 107.1 92 53.3
Actinidia04916 Actinidia chinensis HOM05D002504 ORTHO05D007332 1.5e-21 106.7 85 57.6
BraA06t25879Z Brassica rapa HOM05D002504 ORTHO05D007332 1.5e-21 106.7 119 45.4
Thhalv10003935m.g Eutrema salsugineum HOM05D002504 ORTHO05D007332 1.5e-21 106.7 91 52.7
Lsat_1_v5_gn_4_107620 Lactuca sativa HOM05D002504 ORTHO05D007332 1.5e-21 106.7 85 57.6
BcaB02g09655 Brassica carinata HOM05D002504 ORTHO05D007332 2.0e-21 106.3 87 52.9
BcaC01g02484 Brassica carinata HOM05D002504 ORTHO05D007332 2.0e-21 106.3 87 52.9
A06p29230 Brassica napus HOM05D002504 ORTHO05D007332 2.0e-21 106.3 87 52.9
C03p64300 Brassica napus HOM05D002504 ORTHO05D007332 2.0e-21 106.3 87 52.9
BolC3t18684H Brassica oleracea HOM05D002504 ORTHO05D007332 2.0e-21 106.3 87 52.9
BcaB07g29846 Brassica carinata HOM05D002504 ORTHO05D007332 2.6e-21 105.9 87 52.9
Dinv38674 Davidia involucrata HOM05D002504 ORTHO05D007332 2.6e-21 105.9 87 56.3
AL8G39420 Arabidopsis lyrata HOM05D002504 ORTHO05D007332 3.4e-21 105.5 114 44.7
AT5G62530 Arabidopsis thaliana HOM05D002504 ORTHO05D007332 3.4e-21 105.5 114 44.7
DCAR_001954 Daucus carota HOM05D002504 ORTHO05D007332 3.4e-21 105.5 85 55.3
Lalb_Chr07g0177901 Lupinus albus HOM05D002504 ORTHO05D007332 3.4e-21 105.5 94 54.3
PSO478G0883 Papaver somniferum HOM05D002504 ORTHO05D007332 3.4e-21 105.5 85 56.5
BcaC03g18163 Brassica carinata HOM05D002504 ORTHO05D007332 4.5e-21 105.1 82 54.9
Cfa021306 Carpinus fangiana HOM05D002504 ORTHO05D007332 7.7e-21 104.4 91 53.8
ECA232G1281 Erigeron canadensis HOM05D002504 ORTHO05D007332 7.7e-21 104.4 85 55.3
Actinidia37649 Actinidia chinensis HOM05D002504 ORTHO05D007332 1.3e-20 103.6 85 56.5
AUR62008369 Chenopodium quinoa HOM05D002504 ORTHO05D007332 1.3e-20 103.6 79 57.0
Pp3c5_4940 Physcomitrium patens HOM05D002504 ORTHO05D007332 1.3e-20 103.6 85 56.5
Aqoxy3G03293 Aquilegia oxysepala HOM05D002504 ORTHO05D007332 1.7e-20 103.2 89 53.9
Carub.0008s2320 Capsella rubella HOM05D002504 ORTHO05D007332 2.9e-20 102.4 114 43.9
CARHR276310 Cardamine hirsuta HOM05D002504 ORTHO05D007332 2.9e-20 102.4 91 50.5
Mapoly0053s0041 Marchantia polymorpha HOM05D002504 ORTHO05D007332 2.9e-20 102.4 81 58.0
Sed0027525 Sechium edule HOM05D002504 ORTHO05D007332 5.0e-20 101.7 85 51.8
unitig_0.g2534 Utricularia gibba HOM05D002504 ORTHO05D007332 5.0e-20 101.7 80 57.5
AUR62021730 Chenopodium quinoa HOM05D002504 ORTHO05D007332 8.5e-20 100.9 79 55.7
Cc04_g15410 Coffea canephora HOM05D002504 ORTHO05D007332 3.2e-19 99.0 115 47.0
SGA_v2.0_scaffold25G10908 Striga asiatica HOM05D002504 ORTHO05D007332 5.5e-19 98.2 113 46.0
MBI04_g05752_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007332 3.6e-18 95.5 85 52.9
Rhsim12G0158400 Rhododendron simsii HOM05D002504 ORTHO05D007332 8.0e-18 94.4 85 54.1
MELO3C002203.2 Cucumis melo HOM05D002504 ORTHO05D007332 1.4e-17 93.6 85 48.2
SMO118G0249 Selaginella moellendorffii HOM05D002504 ORTHO05D007332 9.7e-16 87.4 84 48.8
Cre12.g520350 Chlamydomonas reinhardtii HOM05D002504 ORTHO05D007332 1.7e-15 86.7 76 51.3
BraA02t09170Z Brassica rapa HOM05D002504 ORTHO05D007332 3.7e-15 85.5 72 50.0
vmacro17514 Vaccinium macrocarpon HOM05D002504 ORTHO05D007332 3.7e-15 85.5 109 40.4
CDE05G2125 Ceratophyllum demersum HOM05D002504 ORTHO05D007332 7.0e-14 81.3 58 56.9
A02p42390 Brassica napus HOM05D002504 ORTHO05D007332 1.2e-13 80.5 58 55.2
SGA_v2.0_scaffold6G03145 Striga asiatica HOM05D002504 ORTHO05D007332 1.6e-13 80.1 59 59.3
Sabra15G0090000 Salix brachista HOM05D002504 ORTHO05D007332 5.5e-11 71.6 55 58.2
MD09G1225500 Malus domestica HOM05D002504 ORTHO05D007332 3.6e-10 68.9 57 54.4
Medtr1g051515 Medicago truncatula HOM05D002504 ORTHO05D007332 1.2e-08 63.9 59 47.5
SHI03939 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-08 63.9 62 48.4
Aa31sc17G100 Aethionema arabicum HOM05D002504 ORTHO05D059738 3.1e-06 55.8 52 50.0


User provided reference genes

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