Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23685 Sequoiadendron giganteum HOM05D006120 ORTHO05D007913 7.8e-136 487.3 270 100.0
ATR0564G344 Amborella trichopoda HOM05D006120 ORTHO05D007913 1.9e-49 200.3 121 76.9
Mapoly0007s0077 Marchantia polymorpha HOM05D006120 ORTHO05D007913 2.1e-48 196.8 162 59.9
AagrBONN_evm.TU.Sc2ySwM_362.2612 Anthoceros agrestis HOM05D006120 ORTHO05D007913 2.7e-48 196.4 122 73.0
Zm00001eb328070 Zea mays HOM05D006120 ORTHO05D007913 6.1e-48 195.3 121 75.2
Migut.L00074 Erythranthe guttata HOM05D006120 ORTHO05D007913 1.4e-47 194.1 121 75.2
CSS0019172 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 1.8e-47 193.7 122 75.4
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 1.8e-47 193.7 122 75.4
Os07g0627000 Oryza sativa ssp. japonica HOM05D006120 ORTHO05D007913 4.0e-47 192.6 121 76.0
CANSAT01G3221 Cannabis sativa HOM05D006120 ORTHO05D007913 5.2e-47 192.2 133 69.2
Aqoxy6G00482 Aquilegia oxysepala HOM05D006120 ORTHO05D007913 6.8e-47 191.8 121 73.6
Gohir.D03G045900 Gossypium hirsutum HOM05D006120 ORTHO05D007913 6.8e-47 191.8 121 74.4
Gorai.003G047100 Gossypium raimondii HOM05D006120 ORTHO05D007913 6.8e-47 191.8 121 74.4
TAR628G0801 Trochodendron aralioides HOM05D006120 ORTHO05D007913 6.8e-47 191.8 121 74.4
PGR004G1464 Punica granatum HOM05D006120 ORTHO05D007913 8.8e-47 191.4 120 75.0
ECA238G0742 Erigeron canadensis HOM05D006120 ORTHO05D007913 1.5e-46 190.7 122 73.8
AUR62003308 Chenopodium quinoa HOM05D006120 ORTHO05D007913 2.0e-46 190.3 121 71.1
QL06p032201 Quercus lobata HOM05D006120 ORTHO05D007913 2.0e-46 190.3 121 73.6
HanXRQChr15g0484401 Helianthus annuus HOM05D006120 ORTHO05D007913 2.6e-46 189.9 122 73.8
Nn1g05190 Nelumbo nucifera HOM05D006120 ORTHO05D007913 2.6e-46 189.9 121 72.7
AUR62016277 Chenopodium quinoa HOM05D006120 ORTHO05D007913 3.4e-46 189.5 121 71.1
Nn5g28915 Nelumbo nucifera HOM05D006120 ORTHO05D007913 3.4e-46 189.5 121 75.2
Lsat_1_v5_gn_2_67361 Lactuca sativa HOM05D006120 ORTHO05D007913 4.4e-46 189.1 122 74.6
DCAR_010077 Daucus carota HOM05D006120 ORTHO05D007913 5.7e-46 188.7 121 71.9
Sabra07G0068400 Salix brachista HOM05D006120 ORTHO05D007913 5.7e-46 188.7 147 63.9
MD15G1333300 Malus domestica HOM05D006120 ORTHO05D007913 7.5e-46 188.3 121 73.6
SalBow5G0625 Salvia bowleyana HOM05D006120 ORTHO05D007913 7.5e-46 188.3 122 73.8
SalBow5G3003 Salvia bowleyana HOM05D006120 ORTHO05D007913 7.5e-46 188.3 122 73.8
Haze_25037 Corylus avellana HOM05D006120 ORTHO05D007913 9.8e-46 188.0 121 72.7
MBI05_g43693_MAGBIO Magnolia biondii HOM05D006120 ORTHO05D007913 9.8e-46 188.0 131 72.5
Thecc.01G112500 Theobroma cacao HOM05D006120 ORTHO05D007913 9.8e-46 188.0 121 71.9
HPP92_016849 Vanilla planifolia HOM05D006120 ORTHO05D007913 9.8e-46 188.0 122 75.4
Pp3c20_17800 Physcomitrium patens HOM05D006120 ORTHO05D007913 1.3e-45 187.6 122 73.0
GSVIVG01022223001 Vitis vinifera HOM05D006120 ORTHO05D007913 1.7e-45 187.2 122 72.1
arahy.Tifrunner.gnm1.ann1.UD5YJS Arachis hypogaea HOM05D006120 ORTHO05D007913 3.7e-45 186.0 121 71.1
Lj4C877G13 Lonicera japonica HOM05D006120 ORTHO05D007913 3.7e-45 186.0 121 70.2
Atru.chr4.351 Acer truncatum HOM05D006120 ORTHO05D007913 4.9e-45 185.7 121 71.9
ClCG02G013390 Citrullus lanatus HOM05D006120 ORTHO05D007913 4.9e-45 185.7 121 73.6
MELO3C020949.2 Cucumis melo HOM05D006120 ORTHO05D007913 4.9e-45 185.7 121 73.6
Duzib147G0722 Durio zibethinus HOM05D006120 ORTHO05D007913 4.9e-45 185.7 121 73.6
arahy.Tifrunner.gnm1.ann1.AFE07A Arachis hypogaea HOM05D006120 ORTHO05D007913 6.3e-45 185.3 121 71.1
arahy.Tifrunner.gnm1.ann1.Y3LRN9 Arachis hypogaea HOM05D006120 ORTHO05D007913 6.3e-45 185.3 121 71.1
Nitab4.5_0000471g0040 Nicotiana tabacum HOM05D006120 ORTHO05D007913 6.3e-45 185.3 121 71.1
Prupe.6G173200 Prunus persica HOM05D006120 ORTHO05D007913 6.3e-45 185.3 121 71.9
CiPaw.04G092000 Carya illinoinensis HOM05D006120 ORTHO05D007913 8.3e-45 184.9 121 71.9
Hund19657 Selenicereus undatus HOM05D006120 ORTHO05D007913 8.3e-45 184.9 121 70.2
PGSC0003DMG400016589 Solanum tuberosum HOM05D006120 ORTHO05D007913 8.3e-45 184.9 121 71.1
CARHR278870 Cardamine hirsuta HOM05D006120 ORTHO05D007913 1.1e-44 184.5 120 70.8
CsaV3_2G017550 Cucumis sativus L. HOM05D006120 ORTHO05D007913 1.1e-44 184.5 121 73.6
Manes.12G142500 Manihot esculenta HOM05D006120 ORTHO05D007913 1.1e-44 184.5 121 70.2
Potri.007G081400 Populus trichocarpa HOM05D006120 ORTHO05D007913 1.1e-44 184.5 148 60.8
Solyc04g053120.3 Solanum lycopersicum HOM05D006120 ORTHO05D007913 1.4e-44 184.1 121 70.2
Sopen04g023470 Solanum pennellii HOM05D006120 ORTHO05D007913 1.8e-44 183.7 121 70.2
Cc00_g25280 Coffea canephora HOM05D006120 ORTHO05D007913 3.1e-44 183.0 121 74.4
Cc03_g11750 Coffea canephora HOM05D006120 ORTHO05D007913 3.1e-44 183.0 121 74.4
Lalb_Chr08g0238881 Lupinus albus HOM05D006120 ORTHO05D007913 3.1e-44 183.0 121 70.2
Peaxi162Scf00323g00517 Petunia axillaris HOM05D006120 ORTHO05D007913 3.1e-44 183.0 121 71.1
Sp2g27940 Schrenkiella parvula HOM05D006120 ORTHO05D007913 3.1e-44 183.0 121 69.4
Aa31LG1G17070 Aethionema arabicum HOM05D006120 ORTHO05D007913 4.1e-44 182.6 122 70.5
Hma1.2p1_0375F.1_g138700 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 4.1e-44 182.6 121 70.2
Hma1.2p1_0375F.1_g138730 Hydrangea macrophylla HOM05D006120 ORTHO05D007913 4.1e-44 182.6 121 70.2
unitig_88.g27738 Utricularia gibba HOM05D006120 ORTHO05D007913 4.1e-44 182.6 121 71.1
BraA09t36539Z Brassica rapa HOM05D006120 ORTHO05D007913 5.4e-44 182.2 121 68.6
CDE09G0932 Ceratophyllum demersum HOM05D006120 ORTHO05D007913 5.4e-44 182.2 121 71.1
Ciclev10025236m.g Citrus clementina HOM05D006120 ORTHO05D007913 5.4e-44 182.2 121 71.1
C09p10300 Brassica napus HOM05D006120 ORTHO05D007913 7.0e-44 181.8 121 69.4
Carub.0008s2569 Capsella rubella HOM05D006120 ORTHO05D007913 7.0e-44 181.8 121 68.6
CAN.G276.3 Capsicum annuum HOM05D006120 ORTHO05D007913 7.0e-44 181.8 121 70.2
RcHm_v2.0_Chr2g0116371 Rosa chinensis HOM05D006120 ORTHO05D007913 7.0e-44 181.8 121 70.2
TWI53G1580 Tripterygium wilfordii HOM05D006120 ORTHO05D007913 7.0e-44 181.8 121 70.2
A09p08880 Brassica napus HOM05D006120 ORTHO05D007913 9.1e-44 181.4 121 68.6
CDE11G1197 Ceratophyllum demersum HOM05D006120 ORTHO05D007913 9.1e-44 181.4 121 71.1
Actinidia05860 Actinidia chinensis HOM05D006120 ORTHO05D007913 1.2e-43 181.0 121 72.7
THA.LOC104818477 Tarenaya hassleriana HOM05D006120 ORTHO05D007913 1.2e-43 181.0 121 68.6
AT5G64860 Arabidopsis thaliana HOM05D006120 ORTHO05D007913 1.6e-43 180.6 121 68.6
Rhsim10G0151000 Rhododendron simsii HOM05D006120 ORTHO05D007913 1.6e-43 180.6 121 72.7
Glyma.04G219500 Glycine max HOM05D006120 ORTHO05D007913 2.0e-43 180.3 121 68.6
Glyma.06G146400 Glycine max HOM05D006120 ORTHO05D007913 2.0e-43 180.3 121 67.8
TPR.G23750 Trifolium pratense HOM05D006120 ORTHO05D007913 2.0e-43 180.3 121 67.8
BcaB04g19998 Brassica carinata HOM05D006120 ORTHO05D007913 2.7e-43 179.9 121 68.6
FvH4_1g22230 Fragaria vesca HOM05D006120 ORTHO05D007913 2.7e-43 179.9 121 70.2
FAN19G1919 Fragaria x ananassa HOM05D006120 ORTHO05D007913 2.7e-43 179.9 121 70.2
FAN23G0349 Fragaria x ananassa HOM05D006120 ORTHO05D007913 2.7e-43 179.9 121 70.2
Phvul.009G139500 Phaseolus vulgaris HOM05D006120 ORTHO05D007913 4.5e-43 179.1 121 67.8
MSTRG.15748 Avicennia marina HOM05D006120 ORTHO05D007913 5.9e-43 178.7 126 69.0
Lj1g0008968 Lotus japonicus HOM05D006120 ORTHO05D007913 7.7e-43 178.3 121 66.9
Thhalv10003902m.g Eutrema salsugineum HOM05D006120 ORTHO05D007913 1.0e-42 177.9 121 66.9
FAN28G2353 Fragaria x ananassa HOM05D006120 ORTHO05D007913 1.0e-42 177.9 121 69.4
Psat5g065400 Pisum sativum HOM05D006120 ORTHO05D007913 1.0e-42 177.9 121 66.9
Sed0002401 Sechium edule HOM05D006120 ORTHO05D007913 1.0e-42 177.9 121 69.4
Medtr3g094840 Medicago truncatula HOM05D006120 ORTHO05D007913 1.3e-42 177.6 121 67.8
BcaC04g23275 Brassica carinata HOM05D006120 ORTHO05D007913 2.3e-42 176.8 121 69.4
BolC9t53930H Brassica oleracea HOM05D006120 ORTHO05D007913 2.3e-42 176.8 121 69.4
Ca_16892_v3 Cicer arietinum L. HOM05D006120 ORTHO05D007913 2.3e-42 176.8 121 66.9
SMO164G0070 Selaginella moellendorffii HOM05D006120 ORTHO05D007913 2.9e-42 176.4 122 65.6
Eucgr.I00325 Eucalyptus grandis HOM05D006120 ORTHO05D007913 6.6e-42 175.3 120 70.0
Pp3c6_28760 Physcomitrium patens HOM05D006120 ORTHO05D007913 1.4e-39 167.5 122 61.5
Pp3c8_6000 Physcomitrium patens HOM05D006120 ORTHO05D007913 1.8e-39 167.2 122 63.1
COL.COLO4_11015 Corchorus olitorius HOM05D006120 ORTHO05D007913 6.8e-39 165.2 121 68.6
EL10Ac6g14753 Beta vulgaris HOM05D006120 ORTHO05D007913 5.7e-38 162.2 105 69.5
CBR_g31505 Chara braunii HOM05D006120 ORTHO05D007913 3.7e-37 159.5 123 61.0
CBR_g16839 Chara braunii HOM05D006120 ORTHO05D007913 7.0e-36 155.2 141 56.0
vmacro12904 Vaccinium macrocarpon HOM05D006120 ORTHO05D007913 4.6e-35 152.5 128 64.8
SGA_v2.0_scaffold34G13619 Striga asiatica HOM05D006120 ORTHO05D007913 4.3e-33 146.0 96 67.7
Cre03.g181500 Chlamydomonas reinhardtii HOM05D006120 ORTHO05D007913 2.9e-29 133.3 142 50.7
PSO675G5066 Papaver somniferum HOM05D006120 ORTHO05D007913 5.4e-28 129.0 80 72.5
MCO01G332 Micromonas commoda HOM05D006120 ORTHO05D007913 6.0e-27 125.6 118 50.0
PRCOL_00006523 Prasinoderma coloniale HOM05D006120 ORTHO05D007913 2.1e-24 117.1 122 50.0
Gohir.A02G135000 Gossypium hirsutum HOM05D006120 ORTHO05D007913 6.4e-21 105.5 56 87.5
SEGI_28125 Sequoiadendron giganteum HOM05D000133 ORTHO05D008574 3.9e-18 96.3 67 71.6
BolC2t12429H Brassica oleracea HOM05D006120 ORTHO05D042482 2.4e-12 77.0 76 48.7
SEGI_14881 Sequoiadendron giganteum HOM05D063656 ORTHO05D385321 4.6e-11 72.8 65 58.5
Ah.02g125980 Amaranthus hybridus HOM05D006120 ORTHO05D007913 6.0e-11 72.4 79 49.4
SEGI_19182 Sequoiadendron giganteum HOM05D001631 ORTHO05D001591 1.8e-07 60.8 95 37.9
C02p63630 Brassica napus HOM05D006120 ORTHO05D042482 1.2e-06 58.2 64 43.8


User provided reference genes

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