Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23674 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 1.6e-112 409.5 213 100.0
SEGI_39450 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 9.6e-81 303.9 155 100.0
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 4.0e-50 202.2 170 58.2
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 3.3e-49 199.1 168 56.5
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 1.7e-48 196.8 168 56.0
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 2.0e-46 189.9 157 58.6
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 2.0e-46 189.9 157 58.6
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 5.5e-44 181.8 168 52.4
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 5.5e-44 181.8 168 52.4
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 3.6e-43 179.1 158 56.3
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 4.7e-43 178.7 170 50.6
TPR.G8693 Trifolium pratense HOM05D003842 ORTHO05D004436 3.0e-42 176.0 157 52.9
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.0e-42 175.6 157 54.8
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.0e-42 175.6 157 54.8
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 4.0e-42 175.6 157 52.9
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 5.2e-42 175.3 168 49.4
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 6.8e-42 174.9 166 51.8
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 6.8e-42 174.9 168 49.4
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 1.5e-41 173.7 157 53.5
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 2.0e-41 173.3 157 51.6
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 2.0e-41 173.3 157 51.6
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 2.6e-41 172.9 157 53.5
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 2.6e-41 172.9 157 54.1
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 3.4e-41 172.6 168 49.4
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 3.4e-41 172.6 168 50.0
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 4.4e-41 172.2 168 50.6
Atru.chr8.1720 Acer truncatum HOM05D003842 ORTHO05D004436 5.7e-41 171.8 168 50.0
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 5.7e-41 171.8 168 50.6
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 5.7e-41 171.8 154 51.3
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 7.5e-41 171.4 168 50.0
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 7.5e-41 171.4 157 52.9
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.8e-41 171.0 157 53.5
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 9.8e-41 171.0 167 50.9
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 1.3e-40 170.6 157 51.6
Oeu045240.1 Olea europaea HOM05D003842 ORTHO05D004436 1.3e-40 170.6 168 50.0
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 1.7e-40 170.2 157 53.5
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 1.7e-40 170.2 168 50.6
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 2.2e-40 169.9 157 51.0
Ca_29803_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 2.8e-40 169.5 157 51.0
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 2.8e-40 169.5 168 50.0
Gohir.D11G342400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 3.7e-40 169.1 168 50.0
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 8.3e-40 167.9 158 51.9
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 8.3e-40 167.9 168 48.2
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 1.1e-39 167.5 160 52.5
Ciclev10023867m.g Citrus clementina HOM05D003842 ORTHO05D004436 1.1e-39 167.5 170 48.8
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 1.1e-39 167.5 168 50.0
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 1.1e-39 167.5 168 49.4
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 1.4e-39 167.2 157 49.0
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 1.4e-39 167.2 157 49.7
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 3.1e-39 166.0 159 48.4
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 5.4e-39 165.2 157 50.3
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 5.4e-39 165.2 159 48.4
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 5.4e-39 165.2 168 47.0
Eucgr.K02431 Eucalyptus grandis HOM05D003842 ORTHO05D004436 7.0e-39 164.9 168 50.6
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 9.1e-39 164.5 167 49.7
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 3.5e-38 162.5 168 47.6
Nitab4.5_0003314g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 4.5e-38 162.2 168 47.0
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 5.9e-38 161.8 157 50.3
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 1.0e-37 161.0 168 47.0
Gohir.A09G144400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.3e-37 160.6 168 48.2
Pp3c2_21970 Physcomitrium patens HOM05D003842 ORTHO05D004436 1.3e-37 160.6 185 45.4
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 1.3e-37 160.6 168 47.0
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 1.3e-37 160.6 167 46.1
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 3.8e-37 159.1 168 47.6
Gohir.D09G140200 Gossypium hirsutum HOM05D003842 ORTHO05D004436 5.0e-37 158.7 168 47.6
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 1.1e-36 157.5 168 45.8
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 1.9e-36 156.8 168 48.8
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 1.9e-36 156.8 168 48.2
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 1.9e-36 156.8 168 48.2
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 1.9e-36 156.8 157 51.6
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 2.5e-36 156.4 168 48.2
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 3.2e-36 156.0 156 50.0
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 4.2e-36 155.6 168 45.2
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 5.5e-36 155.2 168 47.0
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 7.2e-36 154.8 168 45.8
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 7.2e-36 154.8 159 47.8
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 7.2e-36 154.8 168 45.8
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 7.2e-36 154.8 168 45.8
Cpa.g.sc5.147 Carica papaya HOM05D003842 ORTHO05D004436 9.4e-36 154.5 157 49.0
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 9.4e-36 154.5 153 47.7
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 1.6e-35 153.7 168 45.2
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 2.1e-35 153.3 168 45.8
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 1.0e-34 151.0 168 47.6
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 2.3e-34 149.8 168 46.4
CARHR131190 Cardamine hirsuta HOM05D003842 ORTHO05D004436 3.0e-34 149.4 168 45.8
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 3.0e-34 149.4 168 45.8
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 5.2e-34 148.7 168 46.4
Lj3C992G6 Lonicera japonica HOM05D003842 ORTHO05D004436 7.5e-33 144.8 130 51.5
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 9.8e-33 144.4 146 49.3
Pp3c22_4780 Physcomitrium patens HOM05D003842 ORTHO05D004436 1.3e-32 144.1 169 43.2
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 6.3e-32 141.7 168 43.5
Ca_29497_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 4.1e-31 139.0 127 52.8
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 1.3e-29 134.0 147 42.9
Actinidia26645 Actinidia chinensis HOM05D003842 ORTHO05D004436 9.5e-28 127.9 113 54.9
SMO207G0008 Selaginella moellendorffii HOM05D003842 ORTHO05D004436 1.2e-27 127.5 176 41.5
CDE07G0268 Ceratophyllum demersum HOM05D003842 ORTHO05D004436 5.7e-25 118.6 183 42.6
FAN14G4492 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.3e-21 107.5 98 55.1
CBR_g37399 Chara braunii HOM05D003842 ORTHO05D004436 1.1e-20 104.4 97 51.5
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 1.1e-20 104.4 103 45.6
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 1.9e-20 103.6 101 45.5
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 2.1e-19 100.1 156 35.3
Psat0s1048g0160 Pisum sativum HOM05D003842 ORTHO05D004436 2.1e-19 100.1 105 42.9
SEGI_00401 Sequoiadendron giganteum HOM05D000228 ORTHO05D016956 7.0e-15 85.1 123 46.3
SEGI_09313 Sequoiadendron giganteum HOM05D000394 ORTHO05D024666 2.3e-13 80.1 48 87.5
Glyma.03G186800 Glycine max HOM05D003842 ORTHO05D004436 2.1e-11 73.6 70 55.7
Ca_31348_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 3.6e-11 72.8 67 55.2
SEGI_05591 Sequoiadendron giganteum HOM05D017313 ORTHO05D021251 8.1e-11 71.6 60 66.7
SEGI_36161 Sequoiadendron giganteum HOM05D017313 ORTHO05D021251 8.1e-11 71.6 60 66.7
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 4.0e-10 69.3 75 42.7
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.2e-09 67.8 78 41.0
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 5.8e-09 65.5 70 47.1
SEGI_40452 Sequoiadendron giganteum HOM05D001030 ORTHO05D003090 7.1e-07 58.5 47 68.1


User provided reference genes

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