Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23669 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 1.3e-182 642.9 320 100.0
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 1.0e-94 350.9 319 57.4
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 2.2e-89 333.2 321 55.1
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 8.8e-86 321.2 320 50.9
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 1.1e-85 320.9 320 52.2
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 2.6e-85 319.7 319 51.4
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 2.6e-85 319.7 319 53.0
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 4.4e-85 318.9 319 52.4
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 5.7e-85 318.5 319 51.4
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 9.7e-85 317.8 319 52.7
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 1.3e-84 317.4 319 51.1
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 1.3e-84 317.4 319 52.0
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 2.2e-84 316.6 319 52.0
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 1.4e-83 313.9 318 50.9
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 1.8e-83 313.5 319 50.8
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 2.4e-83 313.2 321 51.4
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 3.1e-83 312.8 319 53.6
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 5.3e-83 312.0 318 50.0
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 9.1e-83 311.2 319 51.4
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 1.2e-82 310.8 319 50.8
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 1.2e-82 310.8 319 50.8
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.5e-82 310.5 320 53.8
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 1.5e-82 310.5 316 52.2
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 2.0e-82 310.1 321 49.8
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 2.0e-82 310.1 316 51.9
CiPaw.01G169500 Carya illinoinensis HOM05D004461 ORTHO05D005543 4.5e-82 308.9 319 49.5
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 4.5e-82 308.9 319 49.8
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 5.9e-82 308.5 319 50.5
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 7.7e-82 308.1 319 50.2
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 1.0e-81 307.8 319 48.9
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.3e-81 307.4 319 50.8
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 1.7e-81 307.0 319 49.2
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 2.2e-81 306.6 319 49.2
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 2.9e-81 306.2 319 49.5
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 3.8e-81 305.8 322 50.6
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 6.5e-81 305.1 319 48.9
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 8.5e-81 304.7 320 50.9
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 1.1e-80 304.3 322 50.0
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 1.4e-80 303.9 318 51.3
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 1.9e-80 303.5 319 49.8
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 1.9e-80 303.5 320 50.0
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 3.2e-80 302.8 320 50.6
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 4.2e-80 302.4 318 49.7
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 4.2e-80 302.4 316 48.4
Eucgr.G01607 Eucalyptus grandis HOM05D004461 ORTHO05D005543 5.5e-80 302.0 311 50.8
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 7.2e-80 301.6 319 50.2
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 1.2e-79 300.8 319 49.5
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 1.6e-79 300.4 317 50.8
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 1.6e-79 300.4 320 48.4
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.6e-79 300.4 319 49.2
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 2.7e-79 299.7 314 49.0
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 3.6e-79 299.3 319 49.2
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 4.7e-79 298.9 316 48.4
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 1.8e-78 297.0 320 49.4
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 1.8e-78 297.0 319 50.2
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 2.3e-78 296.6 319 48.6
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 3.9e-78 295.8 319 49.5
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 3.9e-78 295.8 320 48.1
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 6.7e-78 295.0 319 51.1
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.1e-77 294.3 347 47.0
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 3.3e-77 292.7 319 47.6
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 7.4e-77 291.6 323 48.3
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 1.3e-76 290.8 313 48.9
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 2.8e-76 289.7 319 47.6
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 4.8e-76 288.9 320 48.1
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 8.2e-76 288.1 318 47.8
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 1.1e-75 287.7 320 49.1
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.1e-75 287.7 318 48.1
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 1.4e-75 287.3 319 48.3
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 1.8e-75 287.0 321 48.0
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 1.8e-75 287.0 320 49.1
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 1.8e-75 287.0 319 48.6
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.8e-75 287.0 318 47.5
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 2.4e-75 286.6 319 48.0
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 5.3e-75 285.4 320 48.8
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 5.3e-75 285.4 320 48.8
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 5.3e-75 285.4 320 48.8
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 5.3e-75 285.4 323 47.1
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 7.0e-75 285.0 315 49.8
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 9.1e-75 284.6 319 47.6
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 9.1e-75 284.6 319 47.6
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 1.2e-74 284.3 318 49.1
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 1.6e-74 283.9 320 48.4
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 1.6e-74 283.9 319 48.0
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 5.9e-74 282.0 317 48.3
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 7.7e-74 281.6 316 47.5
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 7.7e-74 281.6 322 46.3
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 6.5e-73 278.5 319 47.3
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 1.5e-72 277.3 319 47.3
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 1.9e-72 276.9 319 47.0
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 5.5e-72 275.4 319 46.7
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 2.7e-71 273.1 323 45.5
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 4.7e-71 272.3 321 47.7
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 6.7e-70 268.5 335 45.4
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 2.2e-68 263.5 281 49.8
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 9.1e-67 258.1 321 43.9
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 2.0e-66 256.9 317 46.1
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 2.0e-66 256.9 323 45.5
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 4.5e-66 255.8 320 42.8
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 7.7e-66 255.0 318 44.3
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 3.2e-64 249.6 328 43.0
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 2.1e-63 246.9 320 42.5
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.5e-61 240.7 305 45.9
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 1.5e-61 240.7 305 46.2
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 3.4e-61 239.6 305 45.2
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 5.7e-61 238.8 323 43.7
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 3.5e-58 229.6 300 44.7
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 1.9e-56 223.8 292 44.5
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 9.5e-56 221.5 328 40.9
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.3e-52 211.1 225 50.7
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 5.4e-51 205.7 335 38.2
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 2.0e-45 187.2 221 46.6
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 1.4e-43 181.0 319 37.0
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 3.5e-42 176.4 225 45.3
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 7.8e-42 175.3 228 44.7
TAR624G0217 Trochodendron aralioides HOM05D004461 ORTHO05D005543 3.9e-41 172.9 242 43.4
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 8.3e-28 128.6 119 52.1
Atru.chr4.1505 Acer truncatum HOM05D004461 ORTHO05D005543 4.6e-26 122.9 90 61.1
Nn1g03496 Nelumbo nucifera HOM05D004461 ORTHO05D005543 7.3e-24 115.5 90 63.3
Solyc08g044410.1 Solanum lycopersicum HOM05D004461 ORTHO05D005543 7.3e-24 115.5 100 54.0
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 2.1e-23 114.0 375 30.1
Lsat_1_v5_gn_2_119641 Lactuca sativa HOM05D004461 ORTHO05D029960 2.7e-10 70.5 65 49.2
Lsat_1_v5_gn_3_101581 Lactuca sativa HOM05D004461 ORTHO05D029960 2.7e-10 70.5 65 50.8
BcaB02g08211 Brassica carinata HOM05D021787 ORTHO05D005543 6.2e-07 59.3 96 36.5


User provided reference genes

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