Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23655 Sequoiadendron giganteum HOM05D013308 ORTHO05D385542 9.2e-65 250.0 119 100.0
SEGI_38557 Sequoiadendron giganteum HOM05D013308 ORTHO05D385788 3.2e-57 224.9 119 89.1
SEGI_21854 Sequoiadendron giganteum HOM05D013308 ORTHO05D000022 1.8e-52 209.1 119 86.6
SEGI_39280 Sequoiadendron giganteum HOM05D013308 ORTHO05D385976 7.9e-24 114.0 55 92.7
SEGI_41612 Sequoiadendron giganteum HOM05D000379 ORTHO05D000254 2.2e-21 105.9 60 83.3
SEGI_22952 Sequoiadendron giganteum HOM05D013308 ORTHO05D000022 2.6e-19 99.0 54 87.0
SEGI_10557 Sequoiadendron giganteum HOM05D013308 ORTHO05D000007 6.5e-18 94.4 55 83.6
SEGI_38691 Sequoiadendron giganteum HOM05D000924 ORTHO05D019257 2.7e-16 89.0 57 77.2
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 5.0e-10 68.2 50 66.0
SEGI_40407 Sequoiadendron giganteum HOM05D001115 ORTHO05D001023 6.5e-10 67.8 45 73.3
SEGI_14088 Sequoiadendron giganteum HOM05D013308 ORTHO05D001539 8.5e-10 67.4 55 63.6
SEGI_16388 Sequoiadendron giganteum HOM05D013308 ORTHO05D001539 8.5e-10 67.4 55 63.6
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.4e-09 63.9 48 68.8
SEGI_29612 Sequoiadendron giganteum HOM05D013308 ORTHO05D000022 1.6e-08 63.2 50 60.0
SEGI_27069 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 2.1e-08 62.8 60 55.0
SEGI_24686 Sequoiadendron giganteum HOM05D000001 ORTHO05D018336 6.1e-08 61.2 47 66.0
SEGI_14680 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 7.9e-08 60.8 45 62.2
SEGI_15038 Sequoiadendron giganteum HOM05D001582 ORTHO05D011374 7.9e-08 60.8 62 50.0
SEGI_02380 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 1.0e-07 60.5 56 57.1
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-07 60.5 51 60.8
Peaxi162Scf01242g00002 Petunia axillaris HOM05D000001 ORTHO05D000003 3.9e-07 58.5 104 31.7
SMO147G0077 Selaginella moellendorffii HOM05D000001 ORTHO05D000003 6.7e-07 57.8 94 31.9
SEGI_04067 Sequoiadendron giganteum HOM05D013308 ORTHO05D000022 6.7e-07 57.8 45 64.4
SEGI_16711 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 6.7e-07 57.8 70 37.1
SEGI_21060 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 6.7e-07 57.8 70 41.4
Nn1g04084 Nelumbo nucifera HOM05D000001 ORTHO05D010094 1.1e-06 57.0 70 42.9
Nn5g30982 Nelumbo nucifera HOM05D000001 ORTHO05D000003 1.1e-06 57.0 91 37.4
AagrBONN_evm.TU.Sc2ySwM_344.3320 Anthoceros agrestis HOM05D000001 ORTHO05D010139 1.5e-06 56.6 52 51.9
SMO273G0024 Selaginella moellendorffii HOM05D000001 ORTHO05D000003 1.5e-06 56.6 94 31.9
SEGI_01471 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 1.5e-06 56.6 43 65.1
SEGI_19406 Sequoiadendron giganteum HOM05D018084 ORTHO05D011433 1.5e-06 56.6 50 58.0
MBI13_g02372_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D010426 2.0e-06 56.2 124 32.3
RcHm_v2.0_Chr5g0008361 Rosa chinensis HOM05D000001 ORTHO05D010094 2.0e-06 56.2 70 38.6
SHI25816 Sapria himalayana HOM05D000001 ORTHO05D000003 2.0e-06 56.2 122 32.0
CiPaw.03G110200 Carya illinoinensis HOM05D000001 ORTHO05D009494 2.6e-06 55.8 104 33.7
Nn4g23581 Nelumbo nucifera HOM05D000001 ORTHO05D000003 2.6e-06 55.8 106 30.2
Nitab4.5_0001348g0170 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.6e-06 55.8 104 31.7
Nitab4.5_0004982g0070 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.6e-06 55.8 104 31.7
SEGI_06151 Sequoiadendron giganteum HOM05D009476 ORTHO05D386454 2.6e-06 55.8 46 60.9
Solyc06g082880.2 Solanum lycopersicum HOM05D000001 ORTHO05D000003 2.6e-06 55.8 104 31.7
Sopen06g034240 Solanum pennellii HOM05D000001 ORTHO05D000003 2.6e-06 55.8 104 31.7
CAN.G874.45 Capsicum annuum HOM05D000001 ORTHO05D000003 3.3e-06 55.5 104 31.7
SEGI_09017 Sequoiadendron giganteum HOM05D013308 ORTHO05D000239 3.3e-06 55.5 45 64.4
SEGI_20782 Sequoiadendron giganteum HOM05D000001 ORTHO05D000239 3.3e-06 55.5 39 69.2
SEGI_14719 Sequoiadendron giganteum HOM05D001500 ORTHO05D000202 4.4e-06 55.1 52 61.5
SEGI_16320 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 4.4e-06 55.1 43 62.8
AagrBONN_evm.TU.Sc2ySwM_228.320 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.7e-06 54.7 103 37.9
MSTRG.23932 Avicennia marina HOM05D000001 ORTHO05D006025 7.4e-06 54.3 83 34.9
SalBow1G3923 Salvia bowleyana HOM05D000001 ORTHO05D006025 7.4e-06 54.3 90 33.3
SalBow1G7280 Salvia bowleyana HOM05D000001 ORTHO05D006025 7.4e-06 54.3 90 33.3
Sp5g08990 Schrenkiella parvula HOM05D000001 ORTHO05D000003 7.4e-06 54.3 108 31.5
SEGI_18634 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 7.4e-06 54.3 50 54.0
Sc12g0002480 Simmondsia chinensis HOM05D000001 ORTHO05D000003 7.4e-06 54.3 47 53.2
Aa31LG10G8490 Aethionema arabicum HOM05D000001 ORTHO05D000003 9.7e-06 53.9 111 32.4
CANSAT64G0996 Cannabis sativa HOM05D000001 ORTHO05D000003 9.7e-06 53.9 106 29.2
QL05p087376 Quercus lobata HOM05D000001 ORTHO05D000003 9.7e-06 53.9 106 29.2
SEGI_20931 Sequoiadendron giganteum HOM05D008993 ORTHO05D010920 9.7e-06 53.9 46 60.9
SEGI_28114 Sequoiadendron giganteum HOM05D000001 ORTHO05D000003 9.7e-06 53.9 45 60.0


User provided reference genes

Program Settings