Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 9.4e-63 243.4 130 100.0
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.8e-21 106.3 111 60.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.2e-20 103.6 111 61.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.2e-20 103.6 82 59.8
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.0e-20 102.8 78 59.0
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 5.8e-20 101.3 91 53.8
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 5.8e-20 101.3 74 60.8
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 5.8e-20 101.3 106 48.1
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 9.9e-20 100.5 95 52.6
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 9.9e-20 100.5 95 52.6
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 1.3e-19 100.1 81 58.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.3e-19 100.1 68 66.2
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.3e-19 100.1 86 55.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.3e-19 100.1 81 61.7
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.7e-19 99.8 90 63.3
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.2e-19 99.4 79 70.9
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.2e-19 99.4 64 84.4
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.9e-19 99.0 65 69.2
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.9e-19 99.0 118 44.1
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 3.8e-19 98.6 81 61.7
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 6.4e-19 97.8 86 53.5
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 8.4e-19 97.4 79 60.8
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.1e-18 97.1 65 66.2
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.1e-18 97.1 65 66.2
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.1e-18 97.1 65 66.2
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.4e-18 96.7 65 66.2
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.4e-18 96.7 93 62.4
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.9e-18 96.3 65 66.2
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.9e-18 96.3 65 66.2
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.9e-18 96.3 65 66.2
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.9e-18 96.3 63 85.7
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.9e-18 96.3 63 85.7
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.9e-18 96.3 78 57.7
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 2.4e-18 95.9 100 52.0
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.2e-18 95.5 119 47.1
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 4.2e-18 95.1 81 65.4
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 4.2e-18 95.1 85 54.1
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 4.2e-18 95.1 85 52.9
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 5.4e-18 94.7 122 45.1
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 5.4e-18 94.7 78 56.4
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 5.4e-18 94.7 136 39.7
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 7.1e-18 94.4 71 63.4
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 7.1e-18 94.4 81 55.6
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 9.2e-18 94.0 106 58.5
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.2e-17 93.6 63 65.1
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.6e-17 93.2 94 47.9
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.6e-17 93.2 78 55.1
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 1.6e-17 93.2 77 57.1
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.6e-17 93.2 100 45.0
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.6e-17 93.2 118 42.4
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 2.1e-17 92.8 125 41.6
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.1e-17 92.8 69 79.7
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 2.1e-17 92.8 78 56.4
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.7e-17 92.4 94 48.9
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.7e-17 92.4 82 54.9
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 2.7e-17 92.4 82 70.7
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.7e-17 92.4 70 80.0
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 3.5e-17 92.0 65 61.5
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 3.5e-17 92.0 104 62.5
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.6e-17 91.7 68 58.8
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 4.6e-17 91.7 99 50.5
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 6.0e-17 91.3 79 53.2
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 7.8e-17 90.9 96 47.9
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 7.8e-17 90.9 61 80.3
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 2.3e-16 89.4 66 78.8
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.0e-16 89.0 63 82.5
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 5.1e-16 88.2 65 80.0
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.5e-15 85.9 87 51.7
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 6.2e-14 81.3 52 69.2
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 9.0e-13 77.4 63 55.6
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 5.8e-12 74.7 114 39.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 7.6e-12 74.3 93 43.0
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 8.4e-11 70.9 70 47.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.9e-10 69.7 46 69.6
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 7.1e-10 67.8 32 84.4
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.7e-09 65.9 36 72.2
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 4.6e-09 65.1 45 64.4
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.3e-08 63.5 45 64.4
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.7e-08 63.2 61 47.5
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 1.7e-08 63.2 46 67.4
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 3.9e-08 62.0 36 66.7


User provided reference genes

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