Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23610 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.6e-225 784.6 411 100.0
SEGI_35812 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 3.0e-107 392.9 192 99.0
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 2.1e-60 237.3 275 49.1
ATR0736G170 Amborella trichopoda HOM05D002270 ORTHO05D002866 5.5e-48 196.1 260 47.7
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 7.1e-48 195.7 266 42.9
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 2.1e-47 194.1 265 42.3
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 1.8e-46 191.0 265 43.4
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 3.0e-46 190.3 265 42.3
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 3.9e-46 189.9 274 41.2
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 9.6e-45 185.3 262 42.4
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.4e-43 181.4 256 41.8
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 5.3e-43 179.5 265 41.5
vmacro22219 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.0e-41 175.3 270 41.5
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 1.3e-41 174.9 268 39.6
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 2.2e-41 174.1 266 39.8
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 1.1e-40 171.8 265 39.6
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 4.2e-40 169.9 267 41.2
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 9.3e-40 168.7 263 41.4
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 2.1e-39 167.5 263 41.1
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 3.5e-39 166.8 265 38.5
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 6.1e-39 166.0 263 39.5
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 6.1e-39 166.0 264 40.9
Solyc04g072270.1 Solanum lycopersicum HOM05D002270 ORTHO05D002866 7.9e-39 165.6 264 39.4
Cpa.g.sc30.16 Carica papaya HOM05D002270 ORTHO05D002866 1.8e-38 164.5 228 43.9
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 5.1e-38 162.9 270 37.4
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 8.7e-38 162.2 268 38.1
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 8.7e-38 162.2 267 38.6
Lsat_1_v5_gn_7_1981 Lactuca sativa HOM05D002270 ORTHO05D002866 8.7e-38 162.2 267 38.6
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 8.7e-38 162.2 266 39.5
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.1e-37 161.8 270 37.4
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 1.1e-37 161.8 258 38.0
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 2.5e-37 160.6 265 41.9
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 3.3e-37 160.2 230 41.7
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 3.3e-37 160.2 263 36.9
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 5.7e-37 159.5 264 38.3
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.6e-36 157.9 271 40.6
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 1.6e-36 157.9 266 40.2
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 2.8e-36 157.1 282 38.7
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 2.8e-36 157.1 269 38.3
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 2.8e-36 157.1 270 37.0
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.7e-36 156.8 284 37.7
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 4.8e-36 156.4 265 36.6
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 6.3e-36 156.0 285 36.8
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 8.2e-36 155.6 269 36.8
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.1e-35 155.2 263 38.0
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 1.1e-35 155.2 269 37.2
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 1.4e-35 154.8 268 40.3
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 1.8e-35 154.5 266 38.7
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 3.1e-35 153.7 272 32.7
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 3.1e-35 153.7 274 37.2
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 3.1e-35 153.7 260 36.9
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 4.1e-35 153.3 271 37.6
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 4.1e-35 153.3 270 38.1
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 5.3e-35 152.9 273 38.8
Peaxi162Scf00226g00824 Petunia axillaris HOM05D002270 ORTHO05D002866 1.2e-34 151.8 258 36.4
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 2.0e-34 151.0 262 38.2
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 3.4e-34 150.2 272 37.9
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 5.9e-34 149.4 269 38.3
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 1.7e-33 147.9 264 36.7
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 2.2e-33 147.5 265 35.5
Nitab4.5_0000433g0190 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.2e-33 147.5 262 35.5
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 2.9e-33 147.1 262 36.3
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 3.8e-33 146.7 276 35.5
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.5e-33 146.0 278 33.8
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 6.5e-33 146.0 268 34.7
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 8.5e-33 145.6 258 38.0
Sp5g22070 Schrenkiella parvula HOM05D002270 ORTHO05D002866 1.1e-32 145.2 268 40.3
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 1.4e-32 144.8 263 35.7
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 1.4e-32 144.8 241 40.2
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 1.9e-32 144.4 278 33.8
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.9e-32 144.4 278 33.8
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 4.2e-32 143.3 265 36.2
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.2e-32 143.3 278 33.8
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 4.2e-32 143.3 238 37.0
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.2e-31 141.7 263 37.6
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.6e-31 140.2 352 31.0
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 4.6e-31 139.8 265 36.2
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 7.9e-31 139.0 280 34.3
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.4e-30 138.3 261 36.8
AagrBONN_evm.TU.Sc2ySwM_117.1506 Anthoceros agrestis HOM05D002270 ORTHO05D002866 1.8e-30 137.9 120 58.3
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.8e-30 137.9 261 35.2
VMungo0331G1745 Vigna mungo HOM05D000103 ORTHO05D000049 2.3e-30 137.5 229 38.4
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 8.8e-30 135.6 260 37.7
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.5e-29 134.8 260 36.9
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 3.3e-29 133.7 268 37.7
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 5.7e-29 132.9 260 36.5
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 5.7e-29 132.9 266 36.1
Os10g0456950 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 2.8e-28 130.6 156 45.5
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 1.4e-27 128.3 274 32.5
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 2.4e-27 127.5 302 31.8
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 6.5e-25 119.4 257 34.2
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 1.9e-24 117.9 290 32.8
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 1.2e-23 115.2 176 38.6
Nitab4.5_0003025g0030 Nicotiana tabacum HOM05D002270 ORTHO05D002866 6.1e-23 112.8 163 37.4
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 6.1e-23 112.8 255 31.8
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 1.8e-22 111.3 260 33.5
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.5e-21 108.2 164 43.3
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 3.3e-21 107.1 264 31.4
BcaC03g14803 Brassica carinata HOM05D002270 ORTHO05D002866 4.4e-21 106.7 250 31.6
COL.COLO4_12569 Corchorus olitorius HOM05D002270 ORTHO05D002866 4.4e-21 106.7 261 29.9
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 5.7e-21 106.3 187 39.0
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 2.8e-20 104.0 206 35.0
AagrBONN_evm.TU.Sc2ySwM_344.4174 Anthoceros agrestis HOM05D002270 ORTHO05D002866 8.2e-20 102.4 164 43.9
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 8.2e-20 102.4 260 32.3
Lalb_Chr20g0113881 Lupinus albus HOM05D002270 ORTHO05D002866 1.8e-19 101.3 143 42.0
QL01p053604 Quercus lobata HOM05D002270 ORTHO05D002866 7.0e-19 99.4 268 31.3
QL01p053642 Quercus lobata HOM05D002270 ORTHO05D002866 4.5e-18 96.7 266 30.5
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 2.7e-15 87.4 263 30.8
SEGI_24148 Sequoiadendron giganteum HOM05D000793 ORTHO05D000783 1.4e-14 85.1 75 62.7
Cre03.g161800 Chlamydomonas reinhardtii HOM05D002270 ORTHO05D002866 6.7e-14 82.8 207 31.9
QL93p0381_0021 Quercus lobata HOM05D002270 ORTHO05D002866 1.7e-12 78.2 106 38.7
SEGI_39038 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 1.1e-11 75.5 36 100.0
Psat4g184160 Pisum sativum HOM05D002270 ORTHO05D002866 4.1e-11 73.6 138 32.6
TPR.G36181 Trifolium pratense HOM05D002270 ORTHO05D002866 7.0e-11 72.8 149 34.2
QL01p054873 Quercus lobata HOM05D002270 ORTHO05D002866 4.5e-10 70.1 141 35.5
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.5e-08 65.1 146 31.5
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-06 58.2 123 37.4


User provided reference genes

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