Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.3e-53 211.1 123 100.0
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.1e-25 120.6 90 67.8
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.2e-19 100.5 89 60.7
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.4e-12 76.3 88 51.1
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 6.0e-11 71.6 110 39.1
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-10 70.1 89 46.1
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.1e-09 67.4 94 42.6
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.3e-09 65.5 92 43.5
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-08 63.9 98 41.8
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 3.6e-08 62.4 99 52.5
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 3.6e-08 62.4 71 50.7
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.8e-08 62.0 65 67.7
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 8.1e-08 61.2 72 45.8
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-07 60.8 110 49.1
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 1.1e-07 60.8 91 57.1
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.4e-07 60.5 142 35.9
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-07 60.5 73 58.9
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.4e-07 60.5 70 45.7
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-07 60.1 69 49.3
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-07 60.1 69 49.3
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 1.8e-07 60.1 91 38.5
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.1e-07 59.3 29 93.1
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 4.0e-07 58.9 76 60.5
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.0e-07 58.9 106 40.6
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 4.0e-07 58.9 34 76.5
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 5.3e-07 58.5 90 53.3
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.9e-07 58.2 92 50.0
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 9.0e-07 57.8 81 44.4
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.2e-06 57.4 62 67.7
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.2e-06 57.4 64 48.4
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.5e-06 57.0 68 47.1
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.0e-06 56.6 92 48.9
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.0e-06 56.6 92 38.0
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 4.5e-06 55.5 67 67.2
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 4.5e-06 55.5 106 39.6
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 5.8e-06 55.1 81 45.7
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 5.8e-06 55.1 30 80.0
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 5.8e-06 55.1 32 81.2
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 5.8e-06 55.1 59 50.8
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 5.8e-06 55.1 87 48.3
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 5.8e-06 55.1 30 86.7
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 7.6e-06 54.7 77 55.8
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.6e-06 54.7 85 45.9
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 7.6e-06 54.7 124 33.1
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.6e-06 54.7 30 80.0


User provided reference genes

Program Settings