Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23354 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-148 529.6 247 100.0
SEGI_15840 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.8e-31 139.8 95 68.4
SEGI_38033 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.4e-29 132.9 93 64.5
SEGI_06759 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.9e-29 131.3 118 53.4
SEGI_40078 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 2.2e-28 130.2 120 50.8
SEGI_31938 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.4e-28 128.6 93 67.7
SEGI_01202 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-27 127.1 93 64.5
SEGI_02055 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.7e-26 123.2 120 49.2
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 8.7e-25 118.2 95 58.9
SEGI_39341 Sequoiadendron giganteum HOM05D000112 ORTHO05D000014 1.1e-24 117.9 84 66.7
SEGI_37560 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.6e-24 114.8 93 59.1
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.7e-20 104.0 120 43.3
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 2.9e-20 103.2 120 42.5
SEGI_05729 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.9e-20 102.4 95 51.6
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 1.8e-17 94.0 67 68.7
SEGI_17312 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.7e-17 92.0 95 48.4
SEGI_18049 Sequoiadendron giganteum HOM05D000751 ORTHO05D000889 2.1e-15 87.0 92 52.2
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 3.7e-15 86.3 93 49.5
SEGI_10602 Sequoiadendron giganteum HOM05D006729 ORTHO05D008502 1.2e-13 81.3 60 61.7
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 1.5e-13 80.9 96 42.7
SEGI_14552 Sequoiadendron giganteum HOM05D001780 ORTHO05D004373 1.5e-13 80.9 59 62.7
SEGI_21278 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.0e-12 78.2 59 61.0
arahy.Tifrunner.gnm1.ann1.UW16ZC Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-12 77.8 96 43.8
Glyma.18G197350 Glycine max HOM05D000023 ORTHO05D000014 1.3e-12 77.8 96 41.7
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-12 77.4 96 44.8
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 1.7e-12 77.4 95 43.2
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.9e-12 76.6 96 42.7
Dinv17138 Davidia involucrata HOM05D000023 ORTHO05D000014 5.0e-12 75.9 96 39.6
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.4e-11 74.3 89 42.7
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 2.5e-11 73.6 89 46.1
TWI74G0763 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.5e-11 73.6 95 46.3
QL02p042311 Quercus lobata HOM05D000023 ORTHO05D000014 3.2e-11 73.2 96 41.7
QL07p028333 Quercus lobata HOM05D000023 ORTHO05D000014 3.2e-11 73.2 96 39.6
SEGI_31970 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.2e-11 72.8 59 55.9
QL10p029308 Quercus lobata HOM05D000023 ORTHO05D000014 5.5e-11 72.4 96 39.6
QL02p012945 Quercus lobata HOM05D000023 ORTHO05D000014 7.2e-11 72.0 96 39.6
QL03p021217 Quercus lobata HOM05D000023 ORTHO05D000014 7.2e-11 72.0 96 39.6
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 9.3e-11 71.6 96 39.6
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 1.2e-10 71.2 96 39.6
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 1.6e-10 70.9 98 38.8
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 1.6e-10 70.9 96 43.8
QL10p037399 Quercus lobata HOM05D000023 ORTHO05D000014 1.6e-10 70.9 96 39.6
Atru.chr1.2498 Acer truncatum HOM05D000023 ORTHO05D000014 2.1e-10 70.5 96 38.5
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 2.1e-10 70.5 94 38.3
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 2.1e-10 70.5 96 38.5
ECA233G4059 Erigeron canadensis HOM05D000009 ORTHO05D000014 2.7e-10 70.1 93 43.0
Lj6g0019681 Lotus japonicus HOM05D000023 ORTHO05D000014 2.7e-10 70.1 106 38.7
BcaC09g48560 Brassica carinata HOM05D000023 ORTHO05D000014 3.5e-10 69.7 96 40.6
ECA233G1845 Erigeron canadensis HOM05D000023 ORTHO05D000014 3.5e-10 69.7 93 44.1
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 3.5e-10 69.7 93 40.9
PSO017G6237 Papaver somniferum HOM05D000023 ORTHO05D000014 3.5e-10 69.7 101 36.6
CSS0010773 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.6e-10 69.3 101 39.6
AUR62032028 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.1e-10 68.9 93 39.8
TPR.G20605 Trifolium pratense HOM05D000023 ORTHO05D000014 7.9e-10 68.6 96 37.5
arahy.Tifrunner.gnm1.ann1.HID98C Arachis hypogaea HOM05D000023 ORTHO05D000014 1.0e-09 68.2 96 37.5
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 1.0e-09 68.2 89 42.7
Gorai.011G116500 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.0e-09 68.2 96 39.6
CSS0029314 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000014 1.3e-09 67.8 101 39.6
QL10p011687 Quercus lobata HOM05D000023 ORTHO05D000014 1.3e-09 67.8 97 38.1
SHI18851 Sapria himalayana HOM05D000023 ORTHO05D000014 1.8e-09 67.4 96 40.6
TPR.G26330 Trifolium pratense HOM05D000023 ORTHO05D000014 1.8e-09 67.4 98 38.8
arahy.Tifrunner.gnm1.ann1.JSNF9J Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-09 67.0 96 38.5
arahy.Tifrunner.gnm1.ann1.S7GMVN Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-09 67.0 96 39.6
TPR.G40402 Trifolium pratense HOM05D000023 ORTHO05D000014 2.3e-09 67.0 107 37.4
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 2.3e-09 67.0 98 39.8
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.0e-09 66.6 96 37.5
Lj4g0023845 Lotus japonicus HOM05D000023 ORTHO05D000014 3.0e-09 66.6 96 38.5
arahy.Tifrunner.gnm1.ann1.9R3R3W Arachis hypogaea HOM05D000023 ORTHO05D000014 3.9e-09 66.2 108 33.3
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.9e-09 66.2 96 36.5
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.9e-09 66.2 96 36.5
SHI21064 Sapria himalayana HOM05D000522 ORTHO05D000565 3.9e-09 66.2 96 40.6
QL02p052017 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL02p079277 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL04p042141 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL05p053353 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL06p001114 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL06p025366 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL10p053741 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL11p043807 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
QL11p051169 Quercus lobata HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 5.1e-09 65.9 96 39.6
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.1e-09 65.9 96 38.5
arahy.Tifrunner.gnm1.ann1.RRIW7B Arachis hypogaea HOM05D000023 ORTHO05D000014 8.7e-09 65.1 96 37.5
PSO782G2905 Papaver somniferum HOM05D000023 ORTHO05D000014 8.7e-09 65.1 97 35.1
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 8.7e-09 65.1 96 36.5
TPR.G30137 Trifolium pratense HOM05D000023 ORTHO05D000014 8.7e-09 65.1 96 36.5
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.1e-08 64.7 96 38.5
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 1.5e-08 64.3 98 38.8
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.5e-08 64.3 96 37.5
SHI14569 Sapria himalayana HOM05D000023 ORTHO05D000014 1.9e-08 63.9 96 38.5
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-08 63.9 90 38.9
arahy.Tifrunner.gnm1.ann1.109VKY Arachis hypogaea HOM05D000023 ORTHO05D000014 2.5e-08 63.5 96 33.3
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 2.5e-08 63.5 94 35.1
PSO700G0308 Papaver somniferum HOM05D000023 ORTHO05D000014 2.5e-08 63.5 96 35.4
QL01p016263 Quercus lobata HOM05D000023 ORTHO05D000014 2.5e-08 63.5 96 34.4
TWI74G0427 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.5e-08 63.5 83 45.8
arahy.Tifrunner.gnm1.ann1.5A2PFR Arachis hypogaea HOM05D000023 ORTHO05D000014 4.3e-08 62.8 96 33.3
ClCG11G007040 Citrullus lanatus HOM05D000003 ORTHO05D000014 4.3e-08 62.8 91 40.7
arahy.Tifrunner.gnm1.ann1.GA19A6 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-08 62.4 96 35.4
arahy.Tifrunner.gnm1.ann1.PERH2Y Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-08 62.4 93 35.5
PSO013G0236 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-08 62.4 98 35.7
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62038522 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
AUR62041775 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.4e-08 62.0 95 38.9
Atru.chr11.1499 Acer truncatum HOM05D000023 ORTHO05D000014 9.7e-08 61.6 96 37.5
AUR62019609 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.7e-08 61.6 93 37.6
Sopen10g016210 Solanum pennellii HOM05D000023 ORTHO05D000014 1.3e-07 61.2 103 35.9
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.6e-07 60.8 95 37.9
Os05g0414501 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.6e-07 60.8 95 34.7
PSO170G4555 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-07 60.1 67 41.8
Thhalv10029312m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 3.7e-07 59.7 98 38.8
PSO017G7398 Papaver somniferum HOM05D000023 ORTHO05D000014 3.7e-07 59.7 95 36.8
PSO017G0124 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO017G0971 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO017G1031 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO017G4761 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO063G7474 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO170G1134 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO210G0286 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO339G3850 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO384G4806 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO478G3870 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 4.8e-07 59.3 91 35.2
TPR.G39959 Trifolium pratense HOM05D000023 ORTHO05D000014 4.8e-07 59.3 85 37.6
Atru.chr13.2560 Acer truncatum HOM05D000023 ORTHO05D000014 6.3e-07 58.9 87 37.9
Glyma.03G100300 Glycine max HOM05D000023 ORTHO05D000014 6.3e-07 58.9 95 38.9
PSO063G7620 Papaver somniferum HOM05D000023 ORTHO05D000014 6.3e-07 58.9 115 33.0
AUR62000817 Chenopodium quinoa HOM05D000023 ORTHO05D000014 8.2e-07 58.5 95 37.9
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 8.2e-07 58.5 97 32.0
RcHm_v2.0_Chr6g0278171 Rosa chinensis HOM05D000023 ORTHO05D000014 8.2e-07 58.5 96 34.4
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 8.2e-07 58.5 96 34.4
AUR62034670 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.1e-06 58.2 92 35.9
Oeu032447.1 Olea europaea HOM05D000023 ORTHO05D000014 1.1e-06 58.2 60 46.7
PSO675G8761 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-06 58.2 95 35.8
PSO478G0613 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-06 57.8 97 35.1
QL04p092962 Quercus lobata HOM05D000023 ORTHO05D000014 1.8e-06 57.4 96 35.4
arahy.Tifrunner.gnm1.ann1.QCU1HD Arachis hypogaea HOM05D000023 ORTHO05D000014 2.4e-06 57.0 96 33.3
C05p35430 Brassica napus HOM05D000023 ORTHO05D000014 2.4e-06 57.0 93 35.5
arahy.Tifrunner.gnm1.ann1.KX0AYA Arachis hypogaea HOM05D000023 ORTHO05D000014 3.1e-06 56.6 96 33.3
ECA238G0901 Erigeron canadensis HOM05D000023 ORTHO05D000014 3.1e-06 56.6 88 35.2
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 4.1e-06 56.2 92 33.7
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 4.1e-06 56.2 90 34.4
BolC1t04816H Brassica oleracea HOM05D000023 ORTHO05D000014 5.3e-06 55.8 70 40.0
TPR.G20642 Trifolium pratense HOM05D000023 ORTHO05D000014 5.3e-06 55.8 97 36.1
SHI12783 Sapria himalayana HOM05D000023 ORTHO05D000014 6.9e-06 55.5 73 39.7
Atru.chr13.2538 Acer truncatum HOM05D000023 ORTHO05D000014 9.0e-06 55.1 68 41.2
arahy.Tifrunner.gnm1.ann1.T2ZBNM Arachis hypogaea HOM05D000023 ORTHO05D000014 9.0e-06 55.1 88 33.0
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.0e-06 55.1 132 28.0
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.0e-06 55.1 132 28.0
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 9.0e-06 55.1 133 33.8


User provided reference genes

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