Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23346 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 7.2e-153 543.9 276 100.0
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 9.4e-20 101.7 136 42.6
TWI79G0907 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 8.0e-19 98.6 161 37.9
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 4.0e-18 96.3 134 44.0
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 4.4e-17 92.8 134 42.5
TAR625G0093 Trochodendron aralioides HOM05D002887 ORTHO05D003159 5.7e-17 92.4 120 45.0
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 7.5e-17 92.0 177 37.9
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 7.5e-17 92.0 177 37.9
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.3e-16 91.3 178 37.6
Dinv14138 Davidia involucrata HOM05D002887 ORTHO05D003159 1.7e-16 90.9 157 35.0
Zm00001eb022020 Zea mays HOM05D002149 ORTHO05D002154 1.7e-16 90.9 122 43.4
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.8e-16 90.1 177 38.4
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 2.8e-16 90.1 151 37.1
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 3.7e-16 89.7 138 40.6
PSO675G9002 Papaver somniferum HOM05D002887 ORTHO05D003159 1.4e-15 87.8 221 30.8
Zm00001eb199550 Zea mays HOM05D002887 ORTHO05D003159 1.4e-15 87.8 116 42.2
Manes.11G098300 Manihot esculenta HOM05D002887 ORTHO05D003159 2.4e-15 87.0 131 37.4
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 2.4e-15 87.0 128 41.4
Potri.004G179571 Populus trichocarpa HOM05D002887 ORTHO05D003159 2.4e-15 87.0 116 41.4
Actinidia20539 Actinidia chinensis HOM05D002887 ORTHO05D003159 3.1e-15 86.7 154 35.7
CDE05G0350 Ceratophyllum demersum HOM05D002887 ORTHO05D003159 3.1e-15 86.7 118 42.4
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 3.1e-15 86.7 133 39.8
Nitab4.5_0003679g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 3.1e-15 86.7 152 34.9
TWI75G1235 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 3.1e-15 86.7 156 37.8
Aqoxy6G01915 Aquilegia oxysepala HOM05D002887 ORTHO05D003159 4.1e-15 86.3 124 38.7
Cpa.g.sc20.128 Carica papaya HOM05D002887 ORTHO05D003159 4.1e-15 86.3 163 32.5
Cc09_g10430 Coffea canephora HOM05D002887 ORTHO05D003159 4.1e-15 86.3 163 34.4
Nitab4.5_0004557g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 4.1e-15 86.3 152 34.9
PSO541G1018 Papaver somniferum HOM05D002887 ORTHO05D003159 4.1e-15 86.3 221 30.3
Hund00008 Selenicereus undatus HOM05D002887 ORTHO05D003159 4.1e-15 86.3 144 36.1
arahy.Tifrunner.gnm1.ann1.DJ9YQ7 Arachis hypogaea HOM05D002887 ORTHO05D003159 5.3e-15 85.9 152 34.9
arahy.Tifrunner.gnm1.ann1.HJG5YQ Arachis hypogaea HOM05D002887 ORTHO05D003159 5.3e-15 85.9 152 34.9
Sabra04G0120900 Salix brachista HOM05D002887 ORTHO05D003159 5.3e-15 85.9 116 41.4
Aa31LG8G14210 Aethionema arabicum HOM05D002887 ORTHO05D003159 7.0e-15 85.5 152 33.6
A09p11180 Brassica napus HOM05D002887 ORTHO05D003159 7.0e-15 85.5 152 32.9
PGR142G2418 Punica granatum HOM05D002887 ORTHO05D003159 7.0e-15 85.5 149 34.9
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 7.0e-15 85.5 134 35.1
HPP92_026887 Vanilla planifolia HOM05D002887 ORTHO05D003159 1.2e-14 84.7 128 44.5
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 1.2e-14 84.7 159 35.8
Thhalv10022585m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 1.6e-14 84.3 152 32.9
FAN27G1571 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.6e-14 84.3 159 34.6
SEGI_36055 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 1.6e-14 84.3 174 30.5
Os08g0499900 Oryza sativa ssp. japonica HOM05D002887 ORTHO05D003159 2.0e-14 84.0 129 35.7
Ah.01g023360 Amaranthus hybridus HOM05D002887 ORTHO05D003159 2.7e-14 83.6 122 38.5
BcaC04g22994 Brassica carinata HOM05D002887 ORTHO05D003159 2.7e-14 83.6 152 32.2
C09p13220 Brassica napus HOM05D002887 ORTHO05D003159 2.7e-14 83.6 152 32.2
BolC9t54215H Brassica oleracea HOM05D002887 ORTHO05D003159 2.7e-14 83.6 152 32.2
BraA09t36760Z Brassica rapa HOM05D002887 ORTHO05D003159 2.7e-14 83.6 152 32.2
Potri.009G139500 Populus trichocarpa HOM05D002887 ORTHO05D003159 2.7e-14 83.6 116 40.5
CSS0044899 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 3.5e-14 83.2 154 35.1
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 3.5e-14 83.2 147 39.5
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 3.5e-14 83.2 138 37.7
FAN15G2445 Fragaria x ananassa HOM05D002887 ORTHO05D003159 3.5e-14 83.2 159 32.7
Sp3g30310 Schrenkiella parvula HOM05D002887 ORTHO05D003159 3.5e-14 83.2 152 32.2
CDE05G3170 Ceratophyllum demersum HOM05D002887 ORTHO05D003159 5.9e-14 82.4 117 39.3
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 5.9e-14 82.4 129 41.1
Prupe.8G170700 Prunus persica HOM05D002887 ORTHO05D003159 7.7e-14 82.0 152 34.2
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 7.7e-14 82.0 127 41.7
AL3G49810 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 1.0e-13 81.6 152 31.6
AT2G17020 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 1.0e-13 81.6 152 31.6
Carub.0003s3090 Capsella rubella HOM05D002887 ORTHO05D003159 1.0e-13 81.6 165 30.3
MD05G1127000 Malus domestica HOM05D002887 ORTHO05D003159 1.0e-13 81.6 152 34.2
Sc08g0002650 Simmondsia chinensis HOM05D002887 ORTHO05D003159 1.0e-13 81.6 152 33.6
CARHR107340 Cardamine hirsuta HOM05D002887 ORTHO05D003159 1.3e-13 81.3 152 31.6
Eucgr.I01466 Eucalyptus grandis HOM05D002887 ORTHO05D003159 1.3e-13 81.3 156 33.3
Lj5A175G92 Lonicera japonica HOM05D002887 ORTHO05D003159 1.3e-13 81.3 152 34.2
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 1.7e-13 80.9 131 38.2
CANSAT25G0878 Cannabis sativa HOM05D002887 ORTHO05D003159 1.7e-13 80.9 116 39.7
AUR62012987 Chenopodium quinoa HOM05D002887 ORTHO05D003159 1.7e-13 80.9 158 32.9
Rhsim11G0194600 Rhododendron simsii HOM05D002887 ORTHO05D003159 1.7e-13 80.9 154 35.1
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 2.2e-13 80.5 150 36.0
AagrBONN_evm.TU.Sc2ySwM_368.912 Anthoceros agrestis HOM05D002887 ORTHO05D003159 2.2e-13 80.5 183 32.8
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 2.2e-13 80.5 138 35.5
EL10Ac9g21324 Beta vulgaris HOM05D002887 ORTHO05D003159 2.2e-13 80.5 120 38.3
Ciclev10028005m.g Citrus clementina HOM05D002887 ORTHO05D003159 2.2e-13 80.5 170 30.6
COL.COLO4_18011 Corchorus olitorius HOM05D002887 ORTHO05D003159 2.2e-13 80.5 128 34.4
Medtr1g114010 Medicago truncatula HOM05D002887 ORTHO05D003159 2.2e-13 80.5 152 32.9
vmacro02299 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 2.2e-13 80.5 165 33.9
BcaB07g31745 Brassica carinata HOM05D002887 ORTHO05D003159 2.9e-13 80.1 152 30.9
FvH4_2g15790 Fragaria vesca HOM05D002887 ORTHO05D003159 2.9e-13 80.1 159 34.0
FAN24G2689 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.9e-13 80.1 159 34.0
RcHm_v2.0_Chr6g0279151 Rosa chinensis HOM05D002887 ORTHO05D003159 2.9e-13 80.1 152 34.2
TPR.G2454 Trifolium pratense HOM05D002887 ORTHO05D003159 2.9e-13 80.1 152 31.6
Zm00001eb397120 Zea mays HOM05D005275 ORTHO05D006435 2.9e-13 80.1 105 42.9
Migut.B00042 Erythranthe guttata HOM05D002887 ORTHO05D003159 3.8e-13 79.7 157 33.8
Gohir.D12G036800 Gossypium hirsutum HOM05D002887 ORTHO05D003159 3.8e-13 79.7 116 35.3
Ca_03284_v3 Cicer arietinum L. HOM05D002887 ORTHO05D003159 5.0e-13 79.3 152 32.2
Duzib248G0120 Durio zibethinus HOM05D002887 ORTHO05D003159 5.0e-13 79.3 116 37.1
Gohir.A12G035800 Gossypium hirsutum HOM05D002887 ORTHO05D003159 5.0e-13 79.3 116 35.3
Gorai.008G038000 Gossypium raimondii HOM05D002887 ORTHO05D003159 5.0e-13 79.3 116 34.5
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 5.0e-13 79.3 166 33.1
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 5.0e-13 79.3 134 36.6
CsaV3_7G001330 Cucumis sativus L. HOM05D002887 ORTHO05D003159 6.5e-13 79.0 152 35.5
QL08p000169 Quercus lobata HOM05D002887 ORTHO05D003159 6.5e-13 79.0 128 39.8
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 8.5e-13 78.6 133 39.8
CAN.G588.111 Capsicum annuum HOM05D002887 ORTHO05D003159 8.5e-13 78.6 152 31.6
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 8.5e-13 78.6 132 37.1
THA.LOC104804318 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 8.5e-13 78.6 116 37.1
TWI79G0472 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 8.5e-13 78.6 173 31.8
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.1e-12 78.2 179 33.5
ATR0661G100 Amborella trichopoda HOM05D002887 ORTHO05D003159 1.5e-12 77.8 153 34.6
Lalb_Chr06g0163831 Lupinus albus HOM05D002887 ORTHO05D003159 1.5e-12 77.8 152 32.2
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.5e-12 77.8 116 36.2
Solyc01g111890.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 1.5e-12 77.8 152 31.6
HPP92_003489 Vanilla planifolia HOM05D002887 ORTHO05D003159 1.5e-12 77.8 123 43.1
Zm00001eb347300 Zea mays HOM05D002887 ORTHO05D003159 1.5e-12 77.8 142 36.6
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 1.9e-12 77.4 132 39.4
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.9e-12 77.4 141 39.0
Lj5g0021290 Lotus japonicus HOM05D002887 ORTHO05D003159 1.9e-12 77.4 116 39.7
SGA_v2.0_scaffold32G13321 Striga asiatica HOM05D002887 ORTHO05D003159 1.9e-12 77.4 136 34.6
Zm00001eb010350 Zea mays HOM05D003414 ORTHO05D003159 1.9e-12 77.4 126 38.1
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 2.5e-12 77.0 133 39.8
Os03g0135400 Oryza sativa ssp. japonica HOM05D002887 ORTHO05D003159 2.5e-12 77.0 129 36.4
Atru.chr5.3466 Acer truncatum HOM05D002887 ORTHO05D003159 3.2e-12 76.6 152 31.6
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 3.2e-12 76.6 157 38.2
MSTRG.19965 Avicennia marina HOM05D002887 ORTHO05D003159 4.2e-12 76.3 172 33.1
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 4.2e-12 76.3 137 39.4
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 7.2e-12 75.5 147 36.7
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 7.2e-12 75.5 156 34.6
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 7.2e-12 75.5 117 41.9
PGSC0003DMG400018645 Solanum tuberosum HOM05D002887 ORTHO05D003159 7.2e-12 75.5 152 31.6
HanXRQChr17g0543831 Helianthus annuus HOM05D002887 ORTHO05D003159 9.4e-12 75.1 140 32.9
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 9.4e-12 75.1 131 38.2
GSVIVG01023956001 Vitis vinifera HOM05D002887 ORTHO05D003159 9.4e-12 75.1 140 32.9
GSVIVG01023957001 Vitis vinifera HOM05D002887 ORTHO05D003159 9.4e-12 75.1 140 32.9
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 1.2e-11 74.7 132 37.9
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 1.2e-11 74.7 132 37.9
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 1.2e-11 74.7 132 37.9
VMungo0720G3147 Vigna mungo HOM05D002887 ORTHO05D003159 1.2e-11 74.7 152 30.3
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 2.1e-11 73.9 131 37.4
Phvul.007G016400 Phaseolus vulgaris HOM05D002887 ORTHO05D003159 2.1e-11 73.9 116 37.1
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 2.1e-11 73.9 120 40.8
CiPaw.06G119200 Carya illinoinensis HOM05D002887 ORTHO05D003159 2.7e-11 73.6 117 36.8
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.7e-11 73.6 116 34.5
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 3.6e-11 73.2 127 37.8
Lsat_1_v5_gn_3_47320 Lactuca sativa HOM05D002887 ORTHO05D003159 3.6e-11 73.2 157 31.8
Zm00001eb117020 Zea mays HOM05D002887 ORTHO05D003159 3.6e-11 73.2 115 39.1
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 6.1e-11 72.4 156 36.5
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 6.1e-11 72.4 131 36.6
Glyma.20G105000 Glycine max HOM05D002887 ORTHO05D003159 8.0e-11 72.0 156 29.5
Lsat_1_v5_gn_7_116000 Lactuca sativa HOM05D002887 ORTHO05D003159 8.0e-11 72.0 163 30.7
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 8.0e-11 72.0 154 29.9
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 1.0e-10 71.6 115 40.0
Cfa005310 Carpinus fangiana HOM05D002887 ORTHO05D003159 1.0e-10 71.6 175 29.7
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 1.0e-10 71.6 131 34.4
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 1.0e-10 71.6 131 34.4
Thecc.02G053100 Theobroma cacao HOM05D002887 ORTHO05D003159 1.0e-10 71.6 116 33.6
FAN20G1407 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.8e-10 70.9 221 27.6
CiPaw.05G086400 Carya illinoinensis HOM05D002887 ORTHO05D003159 2.3e-10 70.5 117 35.0
Nn6g31882 Nelumbo nucifera HOM05D002887 ORTHO05D003159 2.3e-10 70.5 107 39.3
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 2.3e-10 70.5 114 40.4
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 3.0e-10 70.1 121 33.1
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 3.0e-10 70.1 138 31.9
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 3.0e-10 70.1 157 31.8
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 5.2e-10 69.3 163 36.2
ECA246G2827 Erigeron canadensis HOM05D002887 ORTHO05D003159 5.2e-10 69.3 135 31.1
Pp3c16_16630 Physcomitrium patens HOM05D002887 ORTHO05D003159 5.2e-10 69.3 123 32.5
QL11p052640 Quercus lobata HOM05D002887 ORTHO05D003159 5.2e-10 69.3 154 32.5
Zm00001eb402660 Zea mays HOM05D002887 ORTHO05D003159 5.2e-10 69.3 117 35.9
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 6.8e-10 68.9 166 33.7
SalBow1G7852 Salvia bowleyana HOM05D002887 ORTHO05D003159 6.8e-10 68.9 169 29.0
Peaxi162Scf00362g00430 Petunia axillaris HOM05D002887 ORTHO05D003159 1.2e-09 68.2 116 36.2
Sopen01g053930 Solanum pennellii HOM05D002887 ORTHO05D003159 1.5e-09 67.8 152 28.3
unitig_37.g12833 Utricularia gibba HOM05D002887 ORTHO05D003159 5.7e-09 65.9 169 29.6
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-08 64.3 128 32.0
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-08 63.9 128 32.0
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 2.2e-08 63.9 128 32.0
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 2.2e-08 63.9 114 39.5
SMO343G0076 Selaginella moellendorffii HOM05D002887 ORTHO05D003159 2.2e-08 63.9 155 30.3
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-08 63.2 253 28.9
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.4e-07 61.2 159 30.8
PGSC0003DMG400022245 Solanum tuberosum HOM05D002887 ORTHO05D003159 1.4e-07 61.2 136 30.9
FAN16G2949 Fragaria x ananassa HOM05D002887 ORTHO05D003159 5.4e-07 59.3 120 35.0


User provided reference genes

Program Settings