Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.5e-43 178.3 87 100.0
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 3.0e-20 101.7 58 81.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.0e-20 101.7 58 82.8
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 1.5e-19 99.4 58 79.3
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 1.5e-19 99.4 58 79.3
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.9e-19 99.0 58 77.6
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.9e-19 99.0 58 77.6
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.3e-19 98.2 58 75.9
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 4.3e-19 97.8 58 77.6
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 5.6e-19 97.4 58 77.6
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.6e-19 97.4 58 77.6
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.6e-19 97.4 58 77.6
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.2e-18 96.3 58 75.9
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 2.1e-18 95.5 58 75.9
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 2.1e-18 95.5 58 75.9
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 2.1e-18 95.5 58 74.1
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.8e-18 95.1 58 74.1
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 2.8e-18 95.1 58 72.4
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 2.8e-18 95.1 58 72.4
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 3.6e-18 94.7 57 75.4
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.6e-18 94.7 56 73.2
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 4.7e-18 94.4 58 77.6
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 6.2e-18 94.0 58 72.4
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 6.2e-18 94.0 58 72.4
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 6.2e-18 94.0 58 70.7
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 1.1e-17 93.2 58 72.4
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.1e-17 93.2 58 72.4
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.1e-17 93.2 58 70.7
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.4e-17 92.8 58 74.1
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 1.8e-17 92.4 58 69.0
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.8e-17 92.4 58 72.4
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.8e-17 92.4 56 73.2
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 3.1e-17 91.7 58 70.7
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 3.1e-17 91.7 58 70.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 3.1e-17 91.7 58 70.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 3.1e-17 91.7 58 70.7
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 1.5e-16 89.4 58 70.7
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 1.5e-16 89.4 58 67.2
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 2.0e-16 89.0 58 67.2
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.0e-16 89.0 58 69.0
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 2.0e-16 89.0 58 69.0
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 2.6e-16 88.6 58 69.0
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 2.6e-16 88.6 58 69.0
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.6e-16 88.6 58 70.7
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 2.6e-16 88.6 58 69.0
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 2.6e-16 88.6 58 69.0
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 3.4e-16 88.2 58 69.0
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.4e-16 88.2 58 70.7
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 3.4e-16 88.2 58 69.0
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 4.4e-16 87.8 58 69.0
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 4.4e-16 87.8 58 67.2
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 5.8e-16 87.4 58 67.2
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 63.8
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 67.2
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 65.5
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 65.5
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 65.5
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 65.5
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 65.5
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.6e-16 87.0 58 65.5
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 9.9e-16 86.7 58 65.5
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 9.9e-16 86.7 58 69.0
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-15 85.5 58 62.1
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.9e-15 85.1 58 63.8
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.9e-15 85.1 58 63.8
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.9e-15 85.1 58 63.8
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 2.9e-15 85.1 58 65.5
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.8e-15 84.7 57 66.7
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 4.9e-15 84.3 58 65.5
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.9e-15 84.3 57 64.9
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 65.5
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 65.5
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 65.5
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 65.5
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 65.5
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 65.5
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 8.4e-15 83.6 58 62.1
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.1e-14 83.2 58 62.1
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.1e-14 83.2 59 64.4
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.1e-14 83.2 58 56.9
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.4e-14 82.8 58 63.8
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.4e-14 82.8 58 63.8
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.4e-14 82.8 58 63.8
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.4e-14 82.8 58 63.8
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.9e-14 82.4 58 60.3
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.9e-14 82.4 58 63.8
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.4e-14 82.0 58 60.3
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.4e-14 82.0 58 63.8
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 2.4e-14 82.0 58 60.3
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 2.4e-14 82.0 58 58.6
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 2.4e-14 82.0 58 58.6
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.2e-14 81.6 58 62.1
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.2e-14 81.6 58 60.3
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 4.2e-14 81.3 58 62.1
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 4.2e-14 81.3 58 62.1
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-14 81.3 58 58.6
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-14 81.3 58 58.6
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.2e-14 81.3 56 66.1
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.4e-14 80.9 57 63.2
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.4e-14 80.9 57 63.2
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 7.1e-14 80.5 58 58.6
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.2e-14 80.1 58 58.6
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-13 79.7 57 57.9
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.2e-13 79.7 58 58.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.6e-13 79.3 51 68.6
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 2.7e-13 78.6 57 61.4
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.5e-13 78.2 56 62.5
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.5e-13 78.2 56 62.5
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.5e-13 78.2 56 62.5
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 6.0e-13 77.4 58 65.5
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 6.0e-13 77.4 56 53.6
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.0e-12 76.6 58 56.9
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.3e-12 76.3 51 64.7
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.3e-12 76.3 51 64.7
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 1.3e-12 76.3 46 76.1
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.7e-12 75.9 56 60.7
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 5.1e-12 74.3 49 65.3
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 6.6e-12 73.9 58 60.3
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 8.7e-12 73.6 47 66.0
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 4.8e-10 67.8 52 55.8
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.8e-08 60.8 35 74.3


User provided reference genes

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