Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 5.7e-45 183.7 83 100.0
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 5.7e-45 183.7 83 100.0
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.8e-27 125.6 77 68.8
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 4.1e-27 124.4 84 66.7
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 7.0e-27 123.6 77 67.5
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.6e-26 122.5 82 67.1
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 2.6e-26 121.7 83 67.5
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 2.6e-26 121.7 82 68.3
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 4.5e-26 120.9 83 63.9
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.0e-25 119.8 78 70.5
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.3e-25 119.4 70 70.0
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 1.7e-25 119.0 78 70.5
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 1.7e-25 119.0 73 74.0
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 2.9e-25 118.2 72 68.1
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 3.8e-25 117.9 79 65.8
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 5.0e-25 117.5 73 68.5
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.0e-25 117.5 68 75.0
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 5.0e-25 117.5 72 66.7
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 5.0e-25 117.5 68 75.0
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 5.0e-25 117.5 68 75.0
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 5.0e-25 117.5 79 65.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 6.5e-25 117.1 70 71.4
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 6.5e-25 117.1 68 73.5
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 8.5e-25 116.7 70 72.9
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 8.5e-25 116.7 69 73.9
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 8.5e-25 116.7 77 66.2
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 1.1e-24 116.3 70 71.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.1e-24 116.3 68 73.5
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.1e-24 116.3 83 63.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.1e-24 116.3 68 73.5
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.5e-24 115.9 70 72.9
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.5e-24 115.9 70 72.9
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.5e-24 115.9 70 71.4
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.5e-24 115.9 83 62.7
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.9e-24 115.5 70 71.4
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.9e-24 115.5 70 71.4
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.9e-24 115.5 68 73.5
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 1.9e-24 115.5 72 69.4
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 2.5e-24 115.2 68 73.5
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.5e-24 115.2 84 65.5
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 2.5e-24 115.2 68 73.5
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 3.2e-24 114.8 80 62.5
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.5e-24 114.0 82 65.9
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.5e-24 114.0 70 70.0
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 5.5e-24 114.0 68 72.1
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.2e-24 113.6 72 69.4
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.2e-24 113.6 72 69.4
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 7.2e-24 113.6 70 70.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 7.2e-24 113.6 70 70.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 7.2e-24 113.6 82 62.2
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 7.2e-24 113.6 70 71.4
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 7.2e-24 113.6 78 64.1
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 9.4e-24 113.2 80 65.0
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 9.4e-24 113.2 70 71.4
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.2e-23 112.8 86 59.3
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.2e-23 112.8 67 73.1
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 1.2e-23 112.8 68 72.1
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.6e-23 112.5 85 60.0
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.6e-23 112.5 72 69.4
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.6e-23 112.5 72 68.1
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 2.1e-23 112.1 70 70.0
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 2.7e-23 111.7 82 61.0
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 3.6e-23 111.3 72 65.3
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.7e-23 110.9 72 68.1
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 6.1e-23 110.5 71 64.8
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 6.1e-23 110.5 67 74.6
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 8.0e-23 110.2 70 72.9
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.0e-22 109.8 67 68.7
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.0e-22 109.8 70 68.6
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.4e-22 109.4 71 66.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.8e-22 109.0 84 59.5
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.8e-22 109.0 84 59.5
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.8e-22 109.0 84 59.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.3e-22 108.6 70 68.6
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.3e-22 108.6 85 57.6
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.3e-22 108.6 70 68.6
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.3e-22 108.6 70 68.6
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 2.3e-22 108.6 85 57.6
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 3.0e-22 108.2 79 62.0
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.0e-22 108.2 67 71.6
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.0e-22 108.2 67 71.6
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 4.0e-22 107.8 79 60.8
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 4.0e-22 107.8 67 70.1
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 5.2e-22 107.5 79 62.0
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 5.2e-22 107.5 78 64.1
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.2e-22 107.5 71 66.2
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.2e-22 107.5 67 70.1
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 5.2e-22 107.5 77 61.0
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 5.2e-22 107.5 77 61.0
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 6.7e-22 107.1 83 60.2
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 8.8e-22 106.7 68 67.6
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 8.8e-22 106.7 68 67.6
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.1e-21 106.3 67 68.7
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.5e-21 105.9 71 66.2
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 1.5e-21 105.9 67 70.1
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.0e-21 105.5 68 67.6
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.0e-21 105.5 68 67.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 2.6e-21 105.1 72 66.7
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 3.3e-21 104.8 81 55.6
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 3.3e-21 104.8 76 57.9
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 7.5e-21 103.6 68 64.7
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.8e-20 101.7 78 61.5
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 5.0e-17 90.9 66 65.2
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.5e-16 89.4 77 55.8
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.9e-16 89.0 73 58.9
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.9e-16 89.0 78 55.1
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 6.1e-15 84.0 53 71.7
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.3e-12 76.3 56 64.3
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 1.2e-10 69.7 72 47.2
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.9e-10 67.4 72 47.2
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.4e-06 56.2 63 46.0


User provided reference genes

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