Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23205 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 9.9e-197 689.9 338 100.0
ATR0661G169 Amborella trichopoda HOM05D004727 ORTHO05D005788 1.5e-91 340.5 315 53.7
CSS0032352 Camellia sinensis var. sinensis HOM05D004727 ORTHO05D005788 5.8e-88 328.6 238 63.9
HanXRQChr12g0381081 Helianthus annuus HOM05D004727 ORTHO05D005788 7.6e-88 328.2 238 65.1
Cc02_g02360 Coffea canephora HOM05D004727 ORTHO05D005788 3.8e-87 325.9 317 52.1
Aa31sc163G30 Aethionema arabicum HOM05D004727 ORTHO05D005788 6.4e-87 325.1 246 63.0
Carub.0007s1524 Capsella rubella HOM05D004727 ORTHO05D005788 3.2e-86 322.8 253 61.7
Atru.chr1.354 Acer truncatum HOM05D004727 ORTHO05D005788 4.2e-86 322.4 282 56.4
Gorai.007G013000 Gossypium raimondii HOM05D004727 ORTHO05D005788 4.2e-86 322.4 251 59.4
CARHR233170 Cardamine hirsuta HOM05D004727 ORTHO05D005788 9.3e-86 321.2 253 60.9
Lsat_1_v5_gn_9_56621 Lactuca sativa HOM05D004727 ORTHO05D005788 9.3e-86 321.2 253 60.5
AL7G27320 Arabidopsis lyrata HOM05D004727 ORTHO05D005788 1.2e-85 320.9 235 64.7
EL10Ac3g05418 Beta vulgaris HOM05D004727 ORTHO05D005788 1.2e-85 320.9 328 49.7
CAN.G126.24 Capsicum annuum HOM05D004727 ORTHO05D005788 1.6e-85 320.5 265 58.5
PSO478G4818 Papaver somniferum HOM05D004727 ORTHO05D005788 1.6e-85 320.5 311 52.4
CDE11G0547 Ceratophyllum demersum HOM05D004727 ORTHO05D005788 2.7e-85 319.7 321 52.3
Duzib205G1763 Durio zibethinus HOM05D004727 ORTHO05D005788 6.0e-85 318.5 321 50.2
Sp7g23750 Schrenkiella parvula HOM05D004727 ORTHO05D005788 7.8e-85 318.2 244 61.9
Aqoxy7G00234 Aquilegia oxysepala HOM05D004727 ORTHO05D005788 1.0e-84 317.8 302 54.3
HPP92_025470 Vanilla planifolia HOM05D004727 ORTHO05D005788 1.3e-84 317.4 325 50.2
Manes.06G152500 Manihot esculenta HOM05D004727 ORTHO05D005788 1.7e-84 317.0 328 50.0
Eucgr.A02736 Eucalyptus grandis HOM05D004727 ORTHO05D005788 3.0e-84 316.2 303 53.8
Lalb_Chr03g0034881 Lupinus albus HOM05D004727 ORTHO05D005788 3.0e-84 316.2 325 50.5
Glyma.09G131600 Glycine max HOM05D004727 ORTHO05D005788 3.9e-84 315.8 278 54.3
Gohir.D11G011600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 3.9e-84 315.8 326 49.1
PSO782G5178 Papaver somniferum HOM05D004727 ORTHO05D005788 3.9e-84 315.8 309 51.8
Gohir.A11G012400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 5.1e-84 315.5 257 57.6
VMungo0464G1912 Vigna mungo HOM05D004727 ORTHO05D005788 8.7e-84 314.7 278 54.0
Gohir.A08G085600 Gossypium hirsutum HOM05D004727 ORTHO05D005788 1.1e-83 314.3 259 55.2
Solyc03g007920.4 Solanum lycopersicum HOM05D004727 ORTHO05D005788 1.1e-83 314.3 275 56.0
PGSC0003DMG400009500 Solanum tuberosum HOM05D004727 ORTHO05D005788 1.9e-83 313.5 275 56.0
Gorai.004G117100 Gossypium raimondii HOM05D004727 ORTHO05D005788 2.5e-83 313.2 259 55.6
Os06g0103700 Oryza sativa ssp. japonica HOM05D004727 ORTHO05D005788 2.5e-83 313.2 253 58.9
Hund04788 Selenicereus undatus HOM05D004727 ORTHO05D005788 2.5e-83 313.2 284 53.9
Sopen03g003870 Solanum pennellii HOM05D004727 ORTHO05D005788 2.5e-83 313.2 275 56.0
BolC1t02052H Brassica oleracea HOM05D004727 ORTHO05D005788 4.3e-83 312.4 237 62.0
Lalb_Chr19g0130641 Lupinus albus HOM05D004727 ORTHO05D005788 4.3e-83 312.4 269 59.1
Nn1g01641 Nelumbo nucifera HOM05D004727 ORTHO05D005788 4.3e-83 312.4 320 51.9
Thhalv10025771m.g Eutrema salsugineum HOM05D004727 ORTHO05D005788 5.6e-83 312.0 237 62.0
MSTRG.8711 Avicennia marina HOM05D004727 ORTHO05D005788 7.3e-83 311.6 317 49.2
A01p16970 Brassica napus HOM05D004727 ORTHO05D005788 7.3e-83 311.6 236 62.3
BraA01t01653Z Brassica rapa HOM05D004727 ORTHO05D005788 9.6e-83 311.2 237 61.6
CAN.G126.29 Capsicum annuum HOM05D004727 ORTHO05D005788 9.6e-83 311.2 280 55.0
Gohir.D08G109400 Gossypium hirsutum HOM05D004727 ORTHO05D005788 1.3e-82 310.8 290 52.1
MD01G1208600 Malus domestica HOM05D004727 ORTHO05D005788 1.6e-82 310.5 310 52.6
Cfa016290 Carpinus fangiana HOM05D002238 ORTHO05D007272 2.1e-82 310.1 334 49.4
ECA232G4896 Erigeron canadensis HOM05D004727 ORTHO05D005788 2.1e-82 310.1 238 59.2
Lj2g0018940 Lotus japonicus HOM05D004727 ORTHO05D005788 2.1e-82 310.1 297 52.9
Actinidia03138 Actinidia chinensis HOM05D004727 ORTHO05D005788 3.6e-82 309.3 235 62.6
unitig_0.g2469 Utricularia gibba HOM05D004727 ORTHO05D005788 3.6e-82 309.3 291 53.6
C01p21250 Brassica napus HOM05D004727 ORTHO05D005788 4.8e-82 308.9 237 61.2
COL.COLO4_30213 Corchorus olitorius HOM05D004727 ORTHO05D005788 6.2e-82 308.5 321 48.9
TPR.G33517 Trifolium pratense HOM05D004727 ORTHO05D005788 6.2e-82 308.5 322 50.6
Nitab4.5_0000084g0460 Nicotiana tabacum HOM05D004727 ORTHO05D005788 8.1e-82 308.1 297 53.2
Phvul.004G107900 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 8.1e-82 308.1 278 52.9
Prupe.2G301200 Prunus persica HOM05D004727 ORTHO05D005788 8.1e-82 308.1 238 61.3
Sopen03g003850 Solanum pennellii HOM05D004727 ORTHO05D005788 8.1e-82 308.1 295 52.2
Solyc03g007900.3 Solanum lycopersicum HOM05D004727 ORTHO05D005788 1.1e-81 307.8 318 50.0
Glyma.16G178900 Glycine max HOM05D004727 ORTHO05D005788 1.4e-81 307.4 263 54.8
Nitab4.5_0008522g0030 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.8e-81 307.0 297 52.9
vmacro09814 Vaccinium macrocarpon HOM05D004727 ORTHO05D005788 1.8e-81 307.0 251 57.8
PGR042G1629 Punica granatum HOM05D004727 ORTHO05D005788 3.1e-81 306.2 247 58.7
HanXRQChr05g0130171 Helianthus annuus HOM05D004727 ORTHO05D005788 4.0e-81 305.8 258 58.9
Thecc.03G184500 Theobroma cacao HOM05D004727 ORTHO05D005788 4.0e-81 305.8 322 48.8
Sc25g0000700 Simmondsia chinensis HOM05D004727 ORTHO05D005788 6.9e-81 305.1 235 60.4
FvH4_7g30250 Fragaria vesca HOM05D004727 ORTHO05D005788 1.5e-80 303.9 247 58.3
FAN03G1377 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.5e-80 303.9 247 58.7
Potri.017G146200 Populus trichocarpa HOM05D004727 ORTHO05D005788 1.5e-80 303.9 323 48.9
Potri.004G073700 Populus trichocarpa HOM05D004727 ORTHO05D005788 2.0e-80 303.5 316 50.0
CsaV3_3G017470 Cucumis sativus L. HOM05D004727 ORTHO05D005788 2.6e-80 303.1 333 48.3
Migut.F00289 Erythranthe guttata HOM05D004727 ORTHO05D005788 4.5e-80 302.4 229 59.8
Rhsim09G0200700 Rhododendron simsii HOM05D004727 ORTHO05D005788 5.8e-80 302.0 350 47.1
FAN10G1092 Fragaria x ananassa HOM05D004727 ORTHO05D005788 9.9e-80 301.2 247 58.3
FAN10G3700 Fragaria x ananassa HOM05D004727 ORTHO05D005788 9.9e-80 301.2 247 58.3
Nitab4.5_0008522g0010 Nicotiana tabacum HOM05D004727 ORTHO05D005788 1.7e-79 300.4 316 49.1
unitig_52.g17730 Utricularia gibba HOM05D004727 ORTHO05D005788 1.7e-79 300.4 291 50.2
Oeu061663.1 Olea europaea HOM05D004727 ORTHO05D005788 2.2e-79 300.1 314 50.3
Psat0ss29864g0280 Pisum sativum HOM05D004727 ORTHO05D005788 2.2e-79 300.1 322 48.8
Ca_23692_v3 Cicer arietinum L. HOM05D004727 ORTHO05D005788 4.9e-79 298.9 324 48.1
SMO351G0007 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 4.9e-79 298.9 237 58.6
Haze_00047 Corylus avellana HOM05D004727 ORTHO05D005788 8.4e-79 298.1 367 45.8
Peaxi162Scf00444g00244 Petunia axillaris HOM05D004727 ORTHO05D005788 1.1e-78 297.7 342 46.2
Sed0015096 Sechium edule HOM05D004727 ORTHO05D005788 1.9e-78 297.0 326 47.2
GSVIVG01028857001 Vitis vinifera HOM05D004727 ORTHO05D005788 3.2e-78 296.2 326 48.2
RcHm_v2.0_Chr1g0378381 Rosa chinensis HOM05D004727 ORTHO05D005788 4.2e-78 295.8 334 49.1
FAN06G0456 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.2e-77 294.3 261 55.2
FAN06G4134 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.2e-77 294.3 261 55.2
Glyma.09G131800 Glycine max HOM05D004727 ORTHO05D005788 2.1e-77 293.5 268 53.0
Ah.06g181400 Amaranthus hybridus HOM05D004727 ORTHO05D005788 4.6e-77 292.4 249 55.4
Duzib068G1006 Durio zibethinus HOM05D004727 ORTHO05D005788 7.9e-77 291.6 289 50.2
Medtr0057s0080 Medicago truncatula HOM05D004727 ORTHO05D005788 7.9e-77 291.6 322 46.9
Glyma.09G131900 Glycine max HOM05D004727 ORTHO05D005788 2.3e-76 290.0 287 51.6
Phvul.004G108600 Phaseolus vulgaris HOM05D004727 ORTHO05D005788 3.9e-76 289.3 251 54.6
AT4G25720 Arabidopsis thaliana HOM05D004727 ORTHO05D005788 5.1e-76 288.9 289 51.2
Manes.06G152600 Manihot esculenta HOM05D004727 ORTHO05D005788 5.1e-76 288.9 300 49.0
HPP92_025401 Vanilla planifolia HOM05D004727 ORTHO05D005788 6.7e-76 288.5 228 60.1
Medtr0057s0130 Medicago truncatula HOM05D004727 ORTHO05D005788 8.7e-76 288.1 248 54.8
VMungo0464G2071 Vigna mungo HOM05D004727 ORTHO05D005788 1.1e-75 287.7 261 53.6
Pp3c10_5500 Physcomitrium patens HOM05D004727 ORTHO05D005788 1.9e-75 287.0 249 53.4
Mapoly0062s0028 Marchantia polymorpha HOM05D004727 ORTHO05D005788 2.5e-75 286.6 248 53.6
Nitab4.5_0000084g0450 Nicotiana tabacum HOM05D004727 ORTHO05D005788 2.5e-75 286.6 357 44.5
Sabra04G0048400 Salix brachista HOM05D004727 ORTHO05D005788 4.3e-75 285.8 254 54.3
CiPaw.05G262100 Carya illinoinensis HOM05D004727 ORTHO05D005788 9.6e-75 284.6 230 59.1
Hund11719 Selenicereus undatus HOM05D004727 ORTHO05D005788 9.6e-75 284.6 249 57.8
AUR62021119 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.3e-74 284.3 323 47.4
ClCG05G008410 Citrullus lanatus HOM05D004727 ORTHO05D005788 2.1e-74 283.5 365 43.6
SalBow4G1885 Salvia bowleyana HOM05D004727 ORTHO05D005788 1.1e-73 281.2 387 42.6
AUR62031423 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.2e-72 277.7 328 47.3
CANSAT21G0167 Cannabis sativa HOM05D004727 ORTHO05D005788 2.6e-72 276.6 283 49.8
CANSAT21G2173 Cannabis sativa HOM05D004727 ORTHO05D005788 2.6e-72 276.6 283 49.8
Lalb_Chr19g0130651 Lupinus albus HOM05D004727 ORTHO05D005788 5.8e-72 275.4 259 53.3
MELO3C006936.2 Cucumis melo HOM05D004727 ORTHO05D005788 4.9e-71 272.3 322 46.3
SGA_v2.0_scaffold60G21112 Striga asiatica HOM05D004727 ORTHO05D005788 1.9e-70 270.4 293 48.5
EL10Ac4g07582 Beta vulgaris HOM05D004727 ORTHO05D005788 5.5e-70 268.9 342 43.6
Cpa.g.sc107.111 Carica papaya HOM05D004727 ORTHO05D005788 3.5e-69 266.2 351 44.2
CBR_g3311 Chara braunii HOM05D004727 ORTHO05D005788 3.5e-69 266.2 232 53.4
CBR_g3313 Chara braunii HOM05D004727 ORTHO05D005788 3.5e-69 266.2 232 53.4
arahy.Tifrunner.gnm1.ann1.G1I5XM Arachis hypogaea HOM05D004727 ORTHO05D005788 1.0e-68 264.6 295 48.5
Dinv35254 Davidia involucrata HOM05D004727 ORTHO05D005788 3.9e-68 262.7 199 62.8
CBR_g727 Chara braunii HOM05D004727 ORTHO05D005788 1.2e-64 251.1 255 47.5
AUR62036451 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.1e-59 234.6 218 53.7
SEGI_30519 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 2.1e-58 230.3 108 98.1
arahy.Tifrunner.gnm1.ann1.NE53A1 Arachis hypogaea HOM05D004727 ORTHO05D005788 4.8e-58 229.2 295 44.7
MSTRG.27085 Avicennia marina HOM05D004727 ORTHO05D005788 3.1e-57 226.5 189 55.0
Zm00001eb268480 Zea mays HOM05D004727 ORTHO05D005788 5.0e-55 219.2 169 62.7
SMO231G0015 Selaginella moellendorffii HOM05D004727 ORTHO05D005788 8.5e-55 218.4 192 55.7
Cre11.g476150 Chlamydomonas reinhardtii HOM05D004727 ORTHO05D005788 4.2e-54 216.1 258 41.1
Ciclev10005858m.g Citrus clementina HOM05D004727 ORTHO05D005788 6.1e-53 212.2 205 52.7
AUR62017096 Chenopodium quinoa HOM05D004727 ORTHO05D005788 1.8e-52 210.7 193 52.8
MBI12_g08716_MAGBIO Magnolia biondii HOM05D004727 ORTHO05D005788 3.4e-48 196.4 172 57.0
FAN03G2629 Fragaria x ananassa HOM05D004727 ORTHO05D005788 1.0e-47 194.9 210 48.6
PRCOL_00002776 Prasinoderma coloniale HOM05D004727 ORTHO05D005788 2.2e-47 193.7 304 39.1
QL09p012782 Quercus lobata HOM05D004727 ORTHO05D005788 2.9e-47 193.4 154 59.1
Peaxi162Scf00444g00021 Petunia axillaris HOM05D004727 ORTHO05D005788 1.2e-45 188.0 213 48.4
MCO01G501 Micromonas commoda HOM05D004727 ORTHO05D005788 1.8e-44 184.1 253 37.5
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 9.7e-43 178.3 163 52.8
Actinidia31840 Actinidia chinensis HOM05D004727 ORTHO05D005788 3.7e-42 176.4 125 63.2
AUR62036407 Chenopodium quinoa HOM05D004727 ORTHO05D005788 7.7e-40 168.7 194 46.4
DCAR_024607 Daucus carota HOM05D004727 ORTHO05D005788 1.7e-39 167.5 156 53.8
DCAR_008880 Daucus carota HOM05D001628 ORTHO05D001568 5.5e-38 162.5 116 63.8
SEGI_06548 Sequoiadendron giganteum HOM05D004727 ORTHO05D005788 1.0e-36 158.3 73 98.6
AagrBONN_evm.TU.Sc2ySwM_344.2696 Anthoceros agrestis HOM05D004727 ORTHO05D005788 3.9e-36 156.4 130 56.9
EL10Ac4g07580 Beta vulgaris HOM05D004727 ORTHO05D005788 3.0e-28 130.2 130 51.5
Actinidia31841 Actinidia chinensis HOM05D004727 ORTHO05D005788 1.2e-27 128.3 90 67.8
arahy.Tifrunner.gnm1.ann1.FZN7A9 Arachis hypogaea HOM05D004727 ORTHO05D005788 7.5e-27 125.6 189 40.2
Mapoly1114s0001 Marchantia polymorpha HOM05D004727 ORTHO05D005788 8.0e-21 105.5 93 50.5
FAN01G2810 Fragaria x ananassa HOM05D000427 ORTHO05D000386 9.8e-19 98.6 71 64.8
SHI13754 Sapria himalayana HOM05D004727 ORTHO05D005788 2.3e-15 87.4 100 44.0
Ciclev10006767m.g Citrus clementina HOM05D004727 ORTHO05D005788 2.9e-15 87.0 79 49.4
TWI39G0716 Tripterygium wilfordii HOM05D001943 ORTHO05D001969 3.8e-15 86.7 56 62.5
QL09p012777 Quercus lobata HOM05D004727 ORTHO05D005788 1.9e-14 84.3 90 53.3
ECA233G3504 Erigeron canadensis HOM05D004727 ORTHO05D005788 4.4e-11 73.2 129 34.1
MD14G1086700 Malus domestica HOM05D004727 ORTHO05D005788 5.4e-09 66.2 87 44.8
Medtr4g012780 Medicago truncatula HOM05D004727 ORTHO05D005788 1.0e-07 62.0 38 68.4
Hund04787 Selenicereus undatus HOM05D021542 ORTHO05D383482 2.5e-06 57.4 44 54.5
Ah.13g069170 Amaranthus hybridus HOM05D004727 ORTHO05D005788 3.3e-06 57.0 128 39.8


User provided reference genes

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