Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23149 Sequoiadendron giganteum HOM05D004999 ORTHO05D007513 1.5e-113 412.9 215 100.0
TAR381G0667 Trochodendron aralioides HOM05D004999 ORTHO05D007513 6.4e-24 115.2 91 73.6
CDE09G1336 Ceratophyllum demersum HOM05D004999 ORTHO05D007513 8.4e-24 114.8 91 64.8
MBI09_g25164_MAGBIO Magnolia biondii HOM05D004999 ORTHO05D007513 8.4e-24 114.8 91 70.3
DCAR_017472 Daucus carota HOM05D004999 ORTHO05D007513 1.1e-23 114.4 87 69.0
Dinv39509 Davidia involucrata HOM05D004999 ORTHO05D007513 1.4e-23 114.0 83 74.7
Dinv31836 Davidia involucrata HOM05D004999 ORTHO05D007513 3.2e-23 112.8 80 73.8
Aqoxy5G01776 Aquilegia oxysepala HOM05D004999 ORTHO05D007513 5.4e-23 112.1 79 74.7
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 5.4e-23 112.1 90 68.9
Sc02g0008530 Simmondsia chinensis HOM05D004999 ORTHO05D007513 1.6e-22 110.5 92 62.0
vmacro21722 Vaccinium macrocarpon HOM05D004999 ORTHO05D007513 1.6e-22 110.5 83 71.1
Actinidia16981 Actinidia chinensis HOM05D004999 ORTHO05D007513 2.1e-22 110.2 79 70.9
Migut.C00822 Erythranthe guttata HOM05D004999 ORTHO05D007513 2.1e-22 110.2 83 71.1
SGA_v2.0_scaffold11G05913 Striga asiatica HOM05D004999 ORTHO05D007513 4.6e-22 109.0 87 69.0
HPP92_022409 Vanilla planifolia HOM05D004999 ORTHO05D007513 6.0e-22 108.6 77 75.3
GSVIVG01009891001 Vitis vinifera HOM05D004999 ORTHO05D007513 6.0e-22 108.6 84 69.0
CsaV3_2G029460 Cucumis sativus L. HOM05D004999 ORTHO05D007513 7.8e-22 108.2 106 58.5
Nn1g05879 Nelumbo nucifera HOM05D004999 ORTHO05D007513 7.8e-22 108.2 79 70.9
QL02p011429 Quercus lobata HOM05D004999 ORTHO05D007513 7.8e-22 108.2 77 72.7
Cfa013940 Carpinus fangiana HOM05D004999 ORTHO05D007513 1.0e-21 107.8 76 72.4
Haze_22624 Corylus avellana HOM05D004999 ORTHO05D007513 1.0e-21 107.8 76 72.4
ECA238G1075 Erigeron canadensis HOM05D004999 ORTHO05D007513 1.0e-21 107.8 91 67.0
Pp3c13_19410 Physcomitrium patens HOM05D004999 ORTHO05D007513 1.0e-21 107.8 105 61.0
Rhsim06G0021900 Rhododendron simsii HOM05D004999 ORTHO05D007513 1.0e-21 107.8 86 68.6
Sed0007289 Sechium edule HOM05D004999 ORTHO05D007513 1.0e-21 107.8 90 65.6
HPP92_027505 Vanilla planifolia HOM05D004999 ORTHO05D007513 1.0e-21 107.8 77 75.3
EL10Ac6g14553 Beta vulgaris HOM05D004999 ORTHO05D007513 1.3e-21 107.5 87 65.5
ClCG08G014370 Citrullus lanatus HOM05D004999 ORTHO05D007513 1.3e-21 107.5 88 65.9
MELO3C011005.2 Cucumis melo HOM05D004999 ORTHO05D007513 1.3e-21 107.5 106 59.4
CAN.G311.21 Capsicum annuum HOM05D004999 ORTHO05D007513 1.7e-21 107.1 84 70.2
AUR62007769 Chenopodium quinoa HOM05D004999 ORTHO05D007513 2.3e-21 106.7 77 68.8
PGSC0003DMG400003779 Solanum tuberosum HOM05D004999 ORTHO05D007513 2.3e-21 106.7 90 65.6
ATR0767G249 Amborella trichopoda HOM05D004999 ORTHO05D007513 3.0e-21 106.3 88 67.0
Sopen04g034980 Solanum pennellii HOM05D004999 ORTHO05D007513 3.0e-21 106.3 90 65.6
Actinidia15416 Actinidia chinensis HOM05D004999 ORTHO05D007513 3.9e-21 105.9 92 64.1
Oeu020873.1 Olea europaea HOM05D004999 ORTHO05D007513 3.9e-21 105.9 77 72.7
Os04g0112300 Oryza sativa ssp. japonica HOM05D004999 ORTHO05D007513 3.9e-21 105.9 77 71.4
Manes.05G148301 Manihot esculenta HOM05D004999 ORTHO05D007513 5.1e-21 105.5 87 65.5
Nitab4.5_0001540g0030 Nicotiana tabacum HOM05D004999 ORTHO05D007513 5.1e-21 105.5 77 71.4
SalBow7G4700 Salvia bowleyana HOM05D004999 ORTHO05D007513 5.1e-21 105.5 90 66.7
Eucgr.F01642 Eucalyptus grandis HOM05D004999 ORTHO05D007513 6.6e-21 105.1 77 70.1
Lj4A25T52 Lonicera japonica HOM05D004999 ORTHO05D007513 6.6e-21 105.1 90 63.3
PSO170G1336 Papaver somniferum HOM05D004999 ORTHO05D007513 6.6e-21 105.1 86 65.1
Solyc04g081360.3 Solanum lycopersicum HOM05D004999 ORTHO05D007513 6.6e-21 105.1 90 64.4
Peaxi162Scf00438g00629 Petunia axillaris HOM05D004999 ORTHO05D007513 8.7e-21 104.8 84 69.0
Sabra02G0019000 Salix brachista HOM05D004999 ORTHO05D007513 8.7e-21 104.8 100 59.0
Zm00001eb142530 Zea mays HOM05D004999 ORTHO05D007513 8.7e-21 104.8 90 65.6
CSS0048815 Camellia sinensis var. sinensis HOM05D004999 ORTHO05D007513 1.1e-20 104.4 94 62.8
CANSAT01G2959 Cannabis sativa HOM05D004999 ORTHO05D007513 1.1e-20 104.4 89 64.0
Psat5g146560 Pisum sativum HOM05D004999 ORTHO05D007513 1.1e-20 104.4 86 62.8
Duzib093G1482 Durio zibethinus HOM05D004999 ORTHO05D007513 1.5e-20 104.0 93 61.3
Atru.chr13.305 Acer truncatum HOM05D004999 ORTHO05D007513 1.9e-20 103.6 96 64.6
AUR62002963 Chenopodium quinoa HOM05D004999 ORTHO05D007513 2.5e-20 103.2 101 57.4
arahy.Tifrunner.gnm1.ann1.A5JBZH Arachis hypogaea HOM05D004999 ORTHO05D007513 3.3e-20 102.8 90 60.0
arahy.Tifrunner.gnm1.ann1.BI3E2S Arachis hypogaea HOM05D004999 ORTHO05D007513 3.3e-20 102.8 90 60.0
Cpa.g.sc8.166 Carica papaya HOM05D004999 ORTHO05D007513 3.3e-20 102.8 89 60.7
COL.COLO4_26158 Corchorus olitorius HOM05D004999 ORTHO05D007513 3.3e-20 102.8 88 62.5
Ciclev10001119m.g Citrus clementina HOM05D004999 ORTHO05D007513 4.3e-20 102.4 91 63.7
MD08G1013700 Malus domestica HOM05D004999 ORTHO05D007513 4.3e-20 102.4 77 68.8
PSO700G0267 Papaver somniferum HOM05D004999 ORTHO05D007513 4.3e-20 102.4 99 61.6
CiPaw.08G065700 Carya illinoinensis HOM05D004999 ORTHO05D007513 5.6e-20 102.1 87 64.4
Duzib041G0279 Durio zibethinus HOM05D004999 ORTHO05D007513 7.3e-20 101.7 91 63.7
Phvul.001G007200 Phaseolus vulgaris HOM05D004999 ORTHO05D007513 7.3e-20 101.7 74 68.9
Gohir.D05G189800 Gossypium hirsutum HOM05D004999 ORTHO05D007513 9.6e-20 101.3 91 61.5
Medtr1g024920 Medicago truncatula HOM05D004999 ORTHO05D007513 1.3e-19 100.9 77 66.2
Ca_13413_v3 Cicer arietinum L. HOM05D004999 ORTHO05D007513 1.6e-19 100.5 91 58.2
FvH4_2g38570 Fragaria vesca HOM05D004999 ORTHO05D007513 1.6e-19 100.5 87 64.4
FAN27G0904 Fragaria x ananassa HOM05D004999 ORTHO05D007513 1.6e-19 100.5 87 64.4
Thecc.08G043100 Theobroma cacao HOM05D004999 ORTHO05D007513 1.6e-19 100.5 91 60.4
FAN20G3168 Fragaria x ananassa HOM05D004999 ORTHO05D007513 2.1e-19 100.1 87 64.4
Glyma.17G257600 Glycine max HOM05D004999 ORTHO05D007513 2.1e-19 100.1 73 68.5
Gohir.A05G186900 Gossypium hirsutum HOM05D004999 ORTHO05D007513 2.1e-19 100.1 91 60.4
Gorai.009G195100 Gossypium raimondii HOM05D004999 ORTHO05D007513 2.1e-19 100.1 91 60.4
Mapoly0050s0121 Marchantia polymorpha HOM05D004999 ORTHO05D007513 2.1e-19 100.1 89 58.4
Prupe.1G366700 Prunus persica HOM05D004999 ORTHO05D007513 2.1e-19 100.1 77 70.1
RcHm_v2.0_Chr6g0302731 Rosa chinensis HOM05D004999 ORTHO05D007513 2.1e-19 100.1 87 64.4
TWI56G0255 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 2.1e-19 100.1 96 58.3
unitig_749.g13859 Utricularia gibba HOM05D004999 ORTHO05D007513 2.1e-19 100.1 90 61.1
VMungo0647G0227 Vigna mungo HOM05D004999 ORTHO05D007513 2.1e-19 100.1 73 68.5
FAN15G0085 Fragaria x ananassa HOM05D004999 ORTHO05D007513 3.6e-19 99.4 87 63.2
Lalb_Chr24g0398721 Lupinus albus HOM05D004999 ORTHO05D007513 3.6e-19 99.4 91 59.3
Hund05204 Selenicereus undatus HOM05D004999 ORTHO05D007513 3.6e-19 99.4 90 58.9
Potri.002G023300 Populus trichocarpa HOM05D004999 ORTHO05D007513 4.8e-19 99.0 77 66.2
MD15G1013300 Malus domestica HOM05D004999 ORTHO05D007513 6.2e-19 98.6 77 64.9
PGR083G2044 Punica granatum HOM05D004999 ORTHO05D007513 6.2e-19 98.6 90 56.7
AagrBONN_evm.TU.Sc2ySwM_344.355 Anthoceros agrestis HOM05D004999 ORTHO05D007513 1.1e-18 97.8 87 58.6
Glyma.14G218500 Glycine max HOM05D004999 ORTHO05D007513 1.1e-18 97.8 73 67.1
CARHR140980 Cardamine hirsuta HOM05D004999 ORTHO05D007513 1.4e-18 97.4 76 67.1
Cc10_g01760 Coffea canephora HOM05D004999 ORTHO05D007513 1.4e-18 97.4 90 61.1
Lj5g0016888 Lotus japonicus HOM05D004999 ORTHO05D007513 1.8e-18 97.1 90 56.7
Lj5g0025890 Lotus japonicus HOM05D004999 ORTHO05D007513 1.8e-18 97.1 90 56.7
TPR.G34334 Trifolium pratense HOM05D004999 ORTHO05D007513 2.4e-18 96.7 73 65.8
BcaC01g05108 Brassica carinata HOM05D004999 ORTHO05D007513 3.1e-18 96.3 75 65.3
C03p30250 Brassica napus HOM05D004999 ORTHO05D007513 3.1e-18 96.3 75 65.3
CBR_g45432 Chara braunii HOM05D004999 ORTHO05D007513 3.1e-18 96.3 92 58.7
SMO367G0765 Selaginella moellendorffii HOM05D004999 ORTHO05D007513 3.1e-18 96.3 78 65.4
THA.LOC104806888 Tarenaya hassleriana HOM05D004999 ORTHO05D007513 3.1e-18 96.3 77 63.6
AL4G44920 Arabidopsis lyrata HOM05D004999 ORTHO05D007513 4.0e-18 95.9 77 63.6
Carub.0004s2839 Capsella rubella HOM05D004999 ORTHO05D007513 5.3e-18 95.5 77 63.6
Sp4g27780 Schrenkiella parvula HOM05D004999 ORTHO05D007513 9.0e-18 94.7 99 53.5
BcaB02g09016 Brassica carinata HOM05D004999 ORTHO05D007513 1.5e-17 94.0 100 55.0
A03p25340 Brassica napus HOM05D004999 ORTHO05D007513 1.5e-17 94.0 75 64.0
BolC3t15374H Brassica oleracea HOM05D004999 ORTHO05D007513 1.5e-17 94.0 75 64.0
BraA03t11740Z Brassica rapa HOM05D004999 ORTHO05D007513 1.5e-17 94.0 75 64.0
TWI36G1418 Tripterygium wilfordii HOM05D004999 ORTHO05D007513 1.5e-17 94.0 82 59.8
BcaC02g07075 Brassica carinata HOM05D004999 ORTHO05D007513 2.6e-17 93.2 102 52.0
BolC4t28677H Brassica oleracea HOM05D004999 ORTHO05D007513 2.6e-17 93.2 102 52.0
TPR.G30999 Trifolium pratense HOM05D004999 ORTHO05D007513 2.6e-17 93.2 72 63.9
AT2G45730 Arabidopsis thaliana HOM05D004999 ORTHO05D007513 3.4e-17 92.8 105 51.4
A04p33990 Brassica napus HOM05D004999 ORTHO05D007513 5.8e-17 92.0 107 51.4
BraA04t18860Z Brassica rapa HOM05D004999 ORTHO05D007513 5.8e-17 92.0 107 51.4
Thhalv10001448m.g Eutrema salsugineum HOM05D004999 ORTHO05D007513 5.8e-17 92.0 99 53.5
Aa31LG9G12650 Aethionema arabicum HOM05D004999 ORTHO05D007513 7.6e-17 91.7 91 56.0
C04p71790 Brassica napus HOM05D004999 ORTHO05D007513 9.9e-17 91.3 105 51.4
BcaB01g03255 Brassica carinata HOM05D004999 ORTHO05D007513 2.9e-16 89.7 77 59.7
HanXRQChr14g0430231 Helianthus annuus HOM05D004999 ORTHO05D007513 5.4e-15 85.5 83 59.0
Ah.04g153930 Amaranthus hybridus HOM05D004999 ORTHO05D007513 1.3e-13 80.9 102 49.0
Potri.005G238200 Populus trichocarpa HOM05D004999 ORTHO05D007513 2.5e-12 76.6 53 73.6
C08p30330 Brassica napus HOM05D004999 ORTHO05D007513 1.7e-08 63.9 68 52.9
Cre12.g543100 Chlamydomonas reinhardtii HOM05D004999 ORTHO05D007513 7.1e-07 58.5 147 34.0
PRCOL_00001952 Prasinoderma coloniale HOM05D004999 ORTHO05D007513 9.3e-07 58.2 74 44.6
Zm00001eb363800 Zea mays HOM05D004999 ORTHO05D007513 2.7e-06 56.6 53 62.3


User provided reference genes

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