Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 7.9e-126 453.8 222 100.0
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.5e-39 167.2 145 59.3
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.0e-32 142.9 137 51.1
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 7.3e-31 138.3 137 46.7
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.2e-30 137.5 140 50.0
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 4.7e-30 135.6 139 48.2
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 8.1e-30 134.8 151 47.0
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 1.8e-29 133.7 149 49.7
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 2.3e-29 133.3 138 52.2
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 3.1e-29 132.9 139 48.9
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 4.0e-29 132.5 130 52.3
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 4.0e-29 132.5 117 54.7
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 4.0e-29 132.5 139 48.9
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 5.2e-29 132.1 138 52.2
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 5.2e-29 132.1 138 52.2
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 5.2e-29 132.1 139 48.9
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 5.2e-29 132.1 132 50.8
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 8.9e-29 131.3 139 48.9
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.2e-28 131.0 140 49.3
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.0e-28 130.2 139 48.9
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 5.8e-28 128.6 140 47.9
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 5.8e-28 128.6 137 50.4
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 7.6e-28 128.3 140 50.7
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.9e-28 127.9 127 49.6
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.9e-28 127.9 127 50.4
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 9.9e-28 127.9 133 47.4
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.3e-27 127.5 127 52.0
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.7e-27 127.1 117 53.0
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.7e-27 127.1 127 50.4
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.7e-27 127.1 139 48.2
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 1.7e-27 127.1 139 46.8
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.7e-27 127.1 127 50.4
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 2.2e-27 126.7 139 48.9
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 2.2e-27 126.7 127 50.4
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 2.2e-27 126.7 127 48.8
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 2.9e-27 126.3 138 48.6
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 3.8e-27 125.9 146 44.5
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 3.8e-27 125.9 138 52.2
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 3.8e-27 125.9 147 46.3
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 3.8e-27 125.9 134 47.0
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 4.9e-27 125.6 117 52.1
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 8.4e-27 124.8 128 50.8
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 8.4e-27 124.8 198 41.9
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 8.4e-27 124.8 128 50.0
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 8.4e-27 124.8 130 50.0
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 8.4e-27 124.8 138 49.3
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 8.4e-27 124.8 127 48.0
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 8.4e-27 124.8 138 47.8
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.1e-26 124.4 147 44.9
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.1e-26 124.4 136 47.1
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.9e-26 123.6 117 52.1
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.9e-26 123.6 139 46.8
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.9e-26 123.6 139 46.8
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.4e-26 123.2 117 52.1
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 2.4e-26 123.2 140 45.0
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.4e-26 123.2 127 50.4
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.4e-26 123.2 136 49.3
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 2.4e-26 123.2 143 46.9
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 2.4e-26 123.2 127 49.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 2.4e-26 123.2 149 44.3
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.2e-26 122.9 139 47.5
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 3.2e-26 122.9 144 45.8
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.2e-26 122.9 136 47.1
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 4.1e-26 122.5 147 44.9
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.4e-26 122.1 141 46.1
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 5.4e-26 122.1 129 51.2
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 7.1e-26 121.7 139 46.8
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 7.1e-26 121.7 128 52.3
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 7.1e-26 121.7 147 45.6
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 9.2e-26 121.3 117 51.3
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.2e-25 120.9 140 49.3
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 2.1e-25 120.2 127 45.7
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.1e-25 120.2 137 48.2
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 2.1e-25 120.2 139 48.2
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 2.1e-25 120.2 162 43.8
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 2.7e-25 119.8 147 44.9
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 2.7e-25 119.8 127 45.7
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 3.5e-25 119.4 139 44.6
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 3.5e-25 119.4 139 43.9
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 4.6e-25 119.0 140 43.6
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 4.6e-25 119.0 132 47.7
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.6e-25 119.0 141 45.4
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 4.6e-25 119.0 134 47.0
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 4.6e-25 119.0 132 46.2
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 6.0e-25 118.6 147 44.2
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 7.8e-25 118.2 128 49.2
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 7.8e-25 118.2 129 48.8
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 1.0e-24 117.9 141 45.4
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 1.0e-24 117.9 129 48.8
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.0e-24 117.9 147 43.5
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.3e-24 117.5 142 45.1
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.3e-24 117.5 140 47.9
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.3e-24 116.7 117 51.3
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.3e-24 116.7 117 51.3
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.9e-24 115.9 128 50.0
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 6.6e-24 115.2 140 47.9
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 8.6e-24 114.8 128 49.2
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.1e-23 114.4 139 45.3
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 3.3e-23 112.8 140 47.9
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 3.3e-23 112.8 140 46.4
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.3e-23 112.5 102 54.9
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.3e-23 112.5 150 44.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 5.6e-23 112.1 141 46.1
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 5.6e-23 112.1 118 48.3
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 9.6e-23 111.3 117 47.9
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 2.8e-22 109.8 140 45.7
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.8e-22 109.8 128 46.9
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 4.7e-22 109.0 117 47.9
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 4.7e-22 109.0 171 39.2
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 5.2e-21 105.5 117 41.0
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 8.9e-21 104.8 141 40.4
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 7.6e-20 101.7 128 39.8
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 2.2e-19 100.1 101 50.5
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 4.2e-18 95.9 92 50.0
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 4.2e-18 95.9 88 55.7
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.2e-17 94.4 127 40.9
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.3e-16 90.9 153 35.9
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 3.9e-16 89.4 79 51.9
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.9e-16 89.4 86 52.3
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 3.3e-15 86.3 143 37.1
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 2.8e-14 83.2 102 40.2
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 3.6e-14 82.8 77 50.6
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 4.8e-14 82.4 75 54.7
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 3.4e-12 76.3 156 33.3
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.6e-06 57.4 77 42.9


User provided reference genes

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