Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.5e-101 372.1 187 100.0
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.1e-23 113.2 68 82.4
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 4.0e-22 109.0 69 76.8
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 4.0e-22 109.0 69 76.8
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 2.0e-21 106.7 68 76.5
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 2.6e-21 106.3 68 75.0
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 4.4e-21 105.5 67 76.1
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 4.4e-21 105.5 67 76.1
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 9.8e-21 104.4 68 73.5
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 9.8e-21 104.4 67 74.6
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 9.8e-21 104.4 67 74.6
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 1.3e-20 104.0 67 74.6
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.7e-20 103.6 67 74.6
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.7e-20 103.6 67 74.6
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 1.7e-20 103.6 67 74.6
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 2.2e-20 103.2 67 74.6
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 2.2e-20 103.2 67 74.6
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 3.7e-20 102.4 67 73.1
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 3.7e-20 102.4 68 73.5
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.7e-20 102.4 68 76.5
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 6.4e-20 101.7 67 73.1
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 6.4e-20 101.7 67 73.1
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 6.4e-20 101.7 67 73.1
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 6.4e-20 101.7 67 73.1
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 6.4e-20 101.7 67 73.1
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 8.3e-20 101.3 67 71.6
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 71.6
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 70.1
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 70.1
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 70.1
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 70.1
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 70.1
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 1.1e-19 100.9 67 70.1
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 1.4e-19 100.5 67 71.6
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 1.4e-19 100.5 67 71.6
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 1.4e-19 100.5 67 71.6
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 1.4e-19 100.5 68 70.6
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 1.9e-19 100.1 67 71.6
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 2.4e-19 99.8 97 55.7
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 2.4e-19 99.8 67 70.1
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 2.4e-19 99.8 67 70.1
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 3.2e-19 99.4 67 70.1
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 3.2e-19 99.4 67 70.1
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 4.1e-19 99.0 68 67.6
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 4.1e-19 99.0 67 70.1
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 70.1
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 68.7
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 68.7
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 68.7
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 68.7
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 71.6
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 5.4e-19 98.6 67 68.7
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 7.1e-19 98.2 67 67.2
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 7.1e-19 98.2 67 67.2
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 7.1e-19 98.2 67 67.2
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 9.2e-19 97.8 67 68.7
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 9.2e-19 97.8 67 68.7
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 9.2e-19 97.8 67 68.7
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 9.2e-19 97.8 67 68.7
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 1.2e-18 97.4 67 67.2
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 1.2e-18 97.4 67 67.2
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 1.2e-18 97.4 67 67.2
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 1.2e-18 97.4 67 65.7
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 1.2e-18 97.4 69 66.7
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 1.6e-18 97.1 67 67.2
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 1.6e-18 97.1 68 67.6
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 2.1e-18 96.7 67 68.7
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 2.1e-18 96.7 67 68.7
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 2.1e-18 96.7 67 68.7
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 2.7e-18 96.3 67 68.7
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 3.5e-18 95.9 69 66.7
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 6.0e-18 95.1 67 65.7
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 6.0e-18 95.1 67 65.7
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 1.0e-17 94.4 80 60.0
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 1.3e-17 94.0 67 65.7
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 1.3e-17 94.0 67 65.7
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 1.3e-17 94.0 67 65.7
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 1.3e-17 94.0 69 65.2
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 1.3e-17 94.0 68 64.7
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 2.3e-17 93.2 67 65.7
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 2.3e-17 93.2 67 64.2
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 2.3e-17 93.2 67 64.2
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 2.3e-17 93.2 67 65.7
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 2.3e-17 93.2 67 65.7
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 2.3e-17 93.2 68 61.8
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 3.0e-17 92.8 67 64.2
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 3.9e-17 92.4 67 62.7
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 5.1e-17 92.0 68 64.7
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 6.6e-17 91.7 67 62.7
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 8.6e-17 91.3 98 48.0
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 1.1e-16 90.9 68 64.7
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 1.1e-16 90.9 68 63.2
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 1.1e-16 90.9 67 62.7
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 1.5e-16 90.5 67 61.2
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 1.5e-16 90.5 67 61.2
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 1.5e-16 90.5 67 61.2
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.9e-16 90.1 68 63.2
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 9.5e-16 87.8 67 62.7
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 9.5e-16 87.8 69 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 1.2e-15 87.4 70 58.6
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 1.6e-15 87.0 68 60.3
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 2.8e-15 86.3 68 60.3
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 2.8e-15 86.3 67 62.7
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 8.1e-15 84.7 68 58.8
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 1.1e-14 84.3 106 45.3
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 8.9e-14 81.3 70 48.6
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 1.2e-13 80.9 68 57.4
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 1.3e-12 77.4 71 54.9
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 2.1e-10 70.1 53 60.4
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 7.8e-10 68.2 47 66.0
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.3e-09 66.6 45 66.7


User provided reference genes

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