Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 0.0e+00 4306.9 2232 100.0
SEGI_25206 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 0.0e+00 1100.1 536 100.0
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 3.9e-172 610.9 1243 33.1
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 3.6e-162 577.8 1023 36.1
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 1.5e-160 572.4 1080 33.1
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 8.1e-146 523.5 897 35.6
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 2.4e-145 521.9 899 34.7
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 3.5e-141 508.1 902 33.6
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 4.6e-141 507.7 902 34.6
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 6.7e-140 503.8 918 32.4
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 1.1e-139 503.1 918 32.6
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 2.5e-139 501.9 905 34.1
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 2.5e-139 501.9 947 34.3
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 3.3e-139 501.5 914 34.5
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 7.4e-139 500.4 919 32.6
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 4.0e-137 494.6 901 33.1
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 2.2e-135 488.8 897 33.7
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.2e-133 483.0 909 34.0
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 2.1e-133 482.3 906 31.8
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.3e-132 478.8 908 34.0
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 2.3e-132 478.8 896 32.8
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 1.5e-131 476.1 933 33.2
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 4.3e-131 474.6 900 33.0
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 1.3e-130 473.0 906 34.0
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.6e-130 472.6 908 33.7
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.8e-130 471.9 907 33.3
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 6.2e-130 470.7 908 33.6
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 1.4e-129 469.5 970 31.5
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 1.4e-129 469.5 898 31.6
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 1.8e-129 469.2 906 33.4
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 3.1e-129 468.4 903 31.9
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 3.1e-129 468.4 910 33.6
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 3.4e-128 464.9 922 30.9
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 4.5e-128 464.5 912 33.2
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 7.6e-128 463.8 903 33.3
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 1.7e-127 462.6 938 32.6
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 6.5e-127 460.7 908 32.8
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 6.5e-127 460.7 930 32.7
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 6.5e-127 460.7 1004 31.2
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 1.1e-126 459.9 904 33.1
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 5.5e-126 457.6 905 31.9
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 5.5e-126 457.6 909 31.6
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 1.2e-125 456.4 910 31.5
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 1.2e-125 456.4 910 31.5
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 2.1e-125 455.7 998 31.1
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 4.6e-125 454.5 904 33.1
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 4.6e-125 454.5 905 33.7
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 2.3e-124 452.2 915 31.5
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 3.9e-124 451.4 906 30.8
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 1.5e-123 449.5 906 32.8
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 3.3e-123 448.4 906 31.8
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 3.3e-123 448.4 898 31.4
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 1.3e-122 446.4 904 31.5
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 2.2e-122 445.7 905 32.4
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 3.7e-122 444.9 928 31.6
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 4.8e-122 444.5 898 31.7
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 6.9e-121 440.7 997 30.2
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 9.0e-121 440.3 1074 29.8
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 3.4e-120 438.3 895 31.5
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 4.5e-120 438.0 934 30.4
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 4.5e-120 438.0 926 31.7
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 4.5e-120 438.0 891 32.2
Cpa.g.sc1.374 Carica papaya HOM05D006083 ORTHO05D007634 2.9e-119 435.3 686 36.3
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 2.9e-119 435.3 911 32.1
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 6.5e-119 434.1 900 30.8
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 1.1e-118 433.3 906 31.7
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 3.2e-118 431.8 904 31.5
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 1.2e-117 429.9 747 34.9
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.6e-117 429.5 763 34.7
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 3.6e-117 428.3 926 30.8
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 1.1e-115 423.3 893 31.8
RcHm_v2.0_Chr1g0366211 Rosa chinensis HOM05D006083 ORTHO05D007634 1.1e-115 423.3 668 37.6
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 1.5e-115 422.9 908 30.8
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 5.7e-115 421.0 896 30.4
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 9.7e-115 420.2 957 30.6
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 5.3e-113 414.5 906 31.8
CANSAT56G0880 Cannabis sativa HOM05D006083 ORTHO05D007634 2.2e-111 409.1 887 30.1
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 5.0e-111 407.9 904 33.6
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 9.4e-110 403.7 791 32.5
Pp3c6_12750 Physcomitrium patens HOM05D006083 ORTHO05D007634 5.1e-108 397.9 1650 25.3
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 2.6e-107 395.6 710 34.8
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 4.4e-107 394.8 865 31.6
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 3.1e-105 388.7 892 30.6
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 2.3e-100 372.5 938 30.0
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 2.3e-100 372.5 898 30.5
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 3.0e-100 372.1 885 31.4
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 6.7e-100 370.9 737 32.6
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 3.3e-99 368.6 930 29.4
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 5.7e-99 367.9 944 30.4
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 9.7e-99 367.1 944 29.7
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 1.1e-97 363.6 910 29.2
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 4.1e-97 361.7 936 29.8
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 1.6e-96 359.8 1023 28.7
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 2.6e-96 359.0 941 30.3
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 7.7e-96 357.5 938 29.3
HPP92_018996 Vanilla planifolia HOM05D006083 ORTHO05D007634 2.9e-95 355.5 690 32.5
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 7.2e-86 324.3 900 27.8
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 2.0e-83 316.2 948 26.9
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 8.0e-77 294.3 850 28.9
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 5.9e-72 278.1 574 31.5
FAN10G2882 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.1e-69 268.1 432 35.9
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 6.1e-69 268.1 906 24.9
Os12g0566500 Oryza sativa ssp. japonica HOM05D006083 ORTHO05D007634 1.4e-65 256.9 441 34.2
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 6.0e-56 224.9 483 31.7
Peaxi162Scf00060g00126 Petunia axillaris HOM05D006083 ORTHO05D007634 9.6e-38 164.5 288 35.1
AagrBONN_evm.TU.Sc2ySwM_228.2798 Anthoceros agrestis HOM05D006083 ORTHO05D007634 1.3e-29 137.5 350 33.4
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 5.1e-23 115.5 382 28.3
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 2.6e-19 103.2 126 35.7
Actinidia07719 Actinidia chinensis HOM05D001446 ORTHO05D001360 9.9e-19 101.3 444 23.6
HPP92_018997 Vanilla planifolia HOM05D006083 ORTHO05D007634 2.2e-10 73.6 83 47.0
ATR0618G162 Amborella trichopoda HOM05D006083 ORTHO05D007634 3.8e-10 72.8 89 39.3
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 2.5e-09 70.1 48 54.2
Glyma.02G093802 Glycine max HOM05D006083 ORTHO05D007634 7.1e-09 68.6 132 31.1
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 1.3e-07 64.3 72 44.4
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.1e-06 61.2 89 41.6
AL7G29000 Arabidopsis lyrata HOM05D006083 ORTHO05D011291 2.5e-06 60.1 81 32.1


User provided reference genes

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