Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22928 Sequoiadendron giganteum HOM05D004478 ORTHO05D050903 1.3e-64 249.6 126 100.0
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 1.9e-23 112.8 93 57.0
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 2.4e-23 112.5 96 54.2
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 4.2e-23 111.7 93 59.1
Dinv43687 Davidia involucrata HOM05D004478 ORTHO05D007440 1.3e-21 106.7 95 58.9
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 1.3e-21 106.7 95 56.8
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 2.3e-21 105.9 95 56.8
TAR629G2829 Trochodendron aralioides HOM05D004478 ORTHO05D007440 2.3e-21 105.9 95 56.8
CDE12G0470 Ceratophyllum demersum HOM05D004478 ORTHO05D007440 3.0e-21 105.5 94 56.4
QL04p040018 Quercus lobata HOM05D004478 ORTHO05D007440 3.9e-21 105.1 93 58.1
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 5.1e-21 104.8 95 54.7
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 6.6e-21 104.4 93 57.0
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 6.6e-21 104.4 95 57.9
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 6.6e-21 104.4 92 54.3
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis HOM05D004478 ORTHO05D007440 1.5e-20 103.2 93 55.9
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 1.9e-20 102.8 105 52.4
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 1.9e-20 102.8 95 53.7
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 1.9e-20 102.8 93 55.9
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 1.9e-20 102.8 93 54.8
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 3.3e-20 102.1 103 53.4
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 4.3e-20 101.7 93 57.0
Duzib213G0739 Durio zibethinus HOM05D004478 ORTHO05D007440 4.3e-20 101.7 93 57.0
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 4.3e-20 101.7 93 53.8
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 4.3e-20 101.7 95 56.8
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 4.3e-20 101.7 95 56.8
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 4.3e-20 101.7 95 55.8
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 5.6e-20 101.3 93 55.9
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 5.6e-20 101.3 96 55.2
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 5.6e-20 101.3 92 56.5
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 7.3e-20 100.9 95 54.7
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 1.3e-19 100.1 117 49.6
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 1.6e-19 99.8 95 53.7
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 1.6e-19 99.8 92 55.4
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 1.6e-19 99.8 92 55.4
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 1.6e-19 99.8 94 53.2
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 1.6e-19 99.8 95 53.7
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 2.1e-19 99.4 100 55.0
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 2.1e-19 99.4 93 55.9
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 2.8e-19 99.0 95 55.8
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 2.8e-19 99.0 103 52.4
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 2.8e-19 99.0 94 53.2
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 3.6e-19 98.6 112 46.4
Haze_02652 Corylus avellana HOM05D004478 ORTHO05D007440 3.6e-19 98.6 96 53.1
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 3.6e-19 98.6 95 55.8
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 3.6e-19 98.6 93 55.9
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 4.8e-19 98.2 92 54.3
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 6.2e-19 97.8 95 54.7
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 6.2e-19 97.8 95 54.7
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 6.2e-19 97.8 106 50.0
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 8.1e-19 97.4 98 52.0
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 1.1e-18 97.1 93 53.8
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 1.4e-18 96.7 94 53.2
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 1.4e-18 96.7 95 52.6
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 2.4e-18 95.9 95 54.7
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 4.0e-18 95.1 100 53.0
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 4.0e-18 95.1 92 55.4
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 4.0e-18 95.1 96 52.1
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 5.3e-18 94.7 93 52.7
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 5.3e-18 94.7 93 52.7
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 5.3e-18 94.7 92 54.3
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 6.9e-18 94.4 98 52.0
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 9.0e-18 94.0 95 52.6
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 9.0e-18 94.0 98 50.0
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 9.0e-18 94.0 93 51.6
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 9.0e-18 94.0 103 49.5
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 1.2e-17 93.6 95 52.6
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 1.5e-17 93.2 92 52.2
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 1.5e-17 93.2 95 52.6
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 1.5e-17 93.2 95 52.6
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 1.5e-17 93.2 95 52.6
BcaC02g10175 Brassica carinata HOM05D004478 ORTHO05D007440 2.0e-17 92.8 95 52.6
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 2.0e-17 92.8 98 50.0
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 2.0e-17 92.8 95 51.6
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 2.0e-17 92.8 95 51.6
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 3.4e-17 92.0 95 51.6
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 3.4e-17 92.0 96 53.1
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 4.4e-17 91.7 92 51.1
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 4.4e-17 91.7 93 51.6
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 4.4e-17 91.7 95 50.5
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 7.6e-17 90.9 95 51.6
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 7.6e-17 90.9 93 50.5
Peaxi162Scf00013g02924 Petunia axillaris HOM05D004478 ORTHO05D007440 1.3e-16 90.1 93 50.5
Carub.0002s1115 Capsella rubella HOM05D004478 ORTHO05D007440 1.7e-16 89.7 95 51.6
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 2.2e-16 89.4 97 50.5
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 4.9e-16 88.2 95 50.5
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 6.4e-16 87.8 95 50.5
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 6.4e-16 87.8 93 50.5
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 8.4e-16 87.4 95 50.5
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 8.4e-16 87.4 94 51.1
Solyc01g091090.4 Solanum lycopersicum HOM05D004478 ORTHO05D007440 8.4e-16 87.4 93 50.5
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 8.4e-16 87.4 93 50.5
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 1.1e-15 87.0 93 50.5
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 1.4e-15 86.7 93 48.4
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 1.4e-15 86.7 90 50.0
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 1.9e-15 86.3 139 39.6
CAN.G911.6 Capsicum annuum HOM05D004478 ORTHO05D007440 3.2e-15 85.5 93 49.5
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 5.4e-15 84.7 95 49.5
CBR_g24365 Chara braunii HOM05D004478 ORTHO05D007440 5.4e-15 84.7 78 52.6
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 2.7e-14 82.4 93 49.5
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 2.7e-14 82.4 141 39.0
MCO09G490 Micromonas commoda HOM05D004478 ORTHO05D007440 3.5e-14 82.0 94 47.9
Actinidia12201 Actinidia chinensis HOM05D004478 ORTHO05D007440 1.7e-13 79.7 81 51.9
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 8.7e-13 77.4 103 44.7
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 4.3e-12 75.1 82 52.4
SMO174G0054 Selaginella moellendorffii HOM05D004478 ORTHO05D050903 2.4e-10 69.3 61 54.1
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 9.9e-09 63.9 70 45.7
Cre12.g490250 Chlamydomonas reinhardtii HOM05D004478 ORTHO05D007440 1.7e-08 63.2 102 41.2
Lj9C568G3 Lonicera japonica HOM05D004478 ORTHO05D007440 2.9e-08 62.4 75 49.3
CAN.G433.9 Capsicum annuum HOM05D004478 ORTHO05D007440 3.8e-08 62.0 58 55.2
PRCOL_00002890 Prasinoderma coloniale HOM05D004478 ORTHO05D007440 1.2e-06 57.0 96 37.5


User provided reference genes

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