Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22914 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 9.6e-59 229.9 116 100.0
SEGI_01741 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 1.3e-34 149.8 97 77.3
SEGI_12089 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 8.5e-31 137.1 78 84.6
SEGI_07865 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 2.1e-29 132.5 79 79.7
SEGI_05871 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 1.7e-26 122.9 78 75.6
SEGI_30884 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 6.5e-23 110.9 99 59.6
SEGI_09118 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 5.7e-19 97.8 59 78.0
SEGI_04479 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 8.3e-18 94.0 76 63.2
Pp3c15_4820 Physcomitrium patens HOM05D000261 ORTHO05D001168 1.2e-13 80.1 83 48.2
Pp3c21_12290 Physcomitrium patens HOM05D000261 ORTHO05D001168 4.0e-12 75.1 85 45.9
SEGI_20069 Sequoiadendron giganteum HOM05D000261 ORTHO05D001168 6.8e-12 74.3 84 51.2
HPP92_023481 Vanilla planifolia HOM05D000261 ORTHO05D001168 6.8e-12 74.3 72 45.8
ClCG04G011200 Citrullus lanatus HOM05D000261 ORTHO05D001168 1.2e-11 73.6 79 50.6
MELO3C002082.2 Cucumis melo HOM05D000261 ORTHO05D001168 1.5e-11 73.2 79 50.6
CSS0028962 Camellia sinensis var. sinensis HOM05D000261 ORTHO05D001168 2.0e-11 72.8 94 44.7
Sed0007266 Sechium edule HOM05D000261 ORTHO05D001168 2.0e-11 72.8 79 50.6
Dinv09812 Davidia involucrata HOM05D000261 ORTHO05D001168 2.6e-11 72.4 79 50.6
Pp3c15_8690 Physcomitrium patens HOM05D000261 ORTHO05D001168 3.4e-11 72.0 84 42.9
CsaV3_1G006550 Cucumis sativus L. HOM05D000261 ORTHO05D001168 4.4e-11 71.6 79 49.4
MBI19_g21651_MAGBIO Magnolia biondii HOM05D000261 ORTHO05D001168 4.4e-11 71.6 79 48.1
Manes.05G138500 Manihot esculenta HOM05D000261 ORTHO05D001168 5.7e-11 71.2 79 50.6
TAR629G2210 Trochodendron aralioides HOM05D000261 ORTHO05D001168 5.7e-11 71.2 94 42.6
vmacro17666 Vaccinium macrocarpon HOM05D000261 ORTHO05D001168 5.7e-11 71.2 84 46.4
Ciclev10019473m.g Citrus clementina HOM05D000261 ORTHO05D001168 9.8e-11 70.5 88 50.0
TWI15G0250 Tripterygium wilfordii HOM05D000261 ORTHO05D001168 1.3e-10 70.1 79 48.1
Hma1.2p1_1001F.1_g246540 Hydrangea macrophylla HOM05D000261 ORTHO05D001168 1.7e-10 69.7 79 48.1
Lj2g0020668 Lotus japonicus HOM05D000261 ORTHO05D001168 1.7e-10 69.7 73 52.1
Gohir.A11G005900 Gossypium hirsutum HOM05D000261 ORTHO05D001168 2.8e-10 68.9 79 48.1
Gohir.D11G005000 Gossypium hirsutum HOM05D000261 ORTHO05D001168 2.8e-10 68.9 80 47.5
Gorai.007G006200 Gossypium raimondii HOM05D000261 ORTHO05D001168 2.8e-10 68.9 80 47.5
HanXRQChr10g0291991 Helianthus annuus HOM05D000261 ORTHO05D001168 2.8e-10 68.9 76 48.7
Potri.015G053300 Populus trichocarpa HOM05D000261 ORTHO05D001168 2.8e-10 68.9 79 49.4
Os06g0268700 Oryza sativa ssp. japonica HOM05D000261 ORTHO05D001168 4.8e-10 68.2 79 43.0
Migut.D01464 Erythranthe guttata HOM05D000261 ORTHO05D001168 6.3e-10 67.8 77 48.1
Lsat_1_v5_gn_2_12101 Lactuca sativa HOM05D000261 ORTHO05D001168 6.3e-10 67.8 76 50.0
ATR0564G218 Amborella trichopoda HOM05D000261 ORTHO05D001168 8.3e-10 67.4 94 41.5
Duzib068G0905 Durio zibethinus HOM05D000261 ORTHO05D001168 8.3e-10 67.4 79 48.1
Atru.chr9.807 Acer truncatum HOM05D000261 ORTHO05D001168 1.1e-09 67.0 84 45.2
Cpa.g.sc13.8 Carica papaya HOM05D000261 ORTHO05D001168 1.1e-09 67.0 91 46.2
COL.COLO4_04352 Corchorus olitorius HOM05D000261 ORTHO05D001168 1.1e-09 67.0 79 46.8
Nitab4.5_0011561g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 1.1e-09 67.0 79 48.1
Nn4g23794 Nelumbo nucifera HOM05D000261 ORTHO05D001168 1.4e-09 66.6 79 45.6
PSO063G6351 Papaver somniferum HOM05D000261 ORTHO05D001168 1.4e-09 66.6 79 44.3
PSO782G1470 Papaver somniferum HOM05D000261 ORTHO05D001168 1.4e-09 66.6 79 44.3
Duzib205G0941 Durio zibethinus HOM05D000261 ORTHO05D001168 1.8e-09 66.2 79 46.8
ECA238G3731 Erigeron canadensis HOM05D000261 ORTHO05D001168 1.8e-09 66.2 76 47.4
FAN15G1992 Fragaria x ananassa HOM05D000261 ORTHO05D001168 1.8e-09 66.2 88 45.5
Nitab4.5_0010801g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 1.8e-09 66.2 79 46.8
PSO063G5147 Papaver somniferum HOM05D000261 ORTHO05D001168 1.8e-09 66.2 78 43.6
Solyc06g069190.4 Solanum lycopersicum HOM05D000261 ORTHO05D001168 1.8e-09 66.2 79 48.1
Sopen06g026460 Solanum pennellii HOM05D000261 ORTHO05D001168 1.8e-09 66.2 79 48.1
Lj5A147T40 Lonicera japonica HOM05D000261 ORTHO05D001168 2.4e-09 65.9 76 48.7
PGSC0003DMG400004069 Solanum tuberosum HOM05D000261 ORTHO05D001168 2.4e-09 65.9 94 43.6
MSTRG.4554 Avicennia marina HOM05D000261 ORTHO05D001168 3.1e-09 65.5 77 45.5
Cfa019794 Carpinus fangiana HOM05D000261 ORTHO05D001168 3.1e-09 65.5 79 48.1
CANSAT80G1989 Cannabis sativa HOM05D000261 ORTHO05D001168 4.1e-09 65.1 81 46.9
PSO017G6682 Papaver somniferum HOM05D000261 ORTHO05D001168 4.1e-09 65.1 78 42.3
TPR.G35234 Trifolium pratense HOM05D000261 ORTHO05D001168 4.1e-09 65.1 73 47.9
GSVIVG01008267001 Vitis vinifera HOM05D000261 ORTHO05D001168 4.1e-09 65.1 76 47.4
Actinidia39821 Actinidia chinensis HOM05D000261 ORTHO05D001168 5.4e-09 64.7 94 39.4
AL1G55930 Arabidopsis lyrata HOM05D000261 ORTHO05D001168 5.4e-09 64.7 79 46.8
Eucgr.K02213 Eucalyptus grandis HOM05D000261 ORTHO05D001168 5.4e-09 64.7 79 43.0
Peaxi162Scf00013g00933 Petunia axillaris HOM05D000261 ORTHO05D001168 5.4e-09 64.7 79 46.8
Thecc.03G033100 Theobroma cacao HOM05D000261 ORTHO05D001168 5.4e-09 64.7 79 46.8
CiPaw.16G085400 Carya illinoinensis HOM05D000261 ORTHO05D001168 7.0e-09 64.3 79 48.1
FAN15G1042 Fragaria x ananassa HOM05D000261 ORTHO05D001168 9.1e-09 63.9 71 49.3
FAN20G0353 Fragaria x ananassa HOM05D000261 ORTHO05D001168 9.1e-09 63.9 71 49.3
FAN20G1992 Fragaria x ananassa HOM05D000261 ORTHO05D001168 9.1e-09 63.9 71 49.3
FAN24G1645 Fragaria x ananassa HOM05D000261 ORTHO05D001168 9.1e-09 63.9 71 49.3
THA.LOC104820399 Tarenaya hassleriana HOM05D000261 ORTHO05D001168 9.1e-09 63.9 79 45.6
CARHR039090 Cardamine hirsuta HOM05D000261 ORTHO05D001168 1.2e-08 63.5 76 47.4
Cc04_g07260 Coffea canephora HOM05D000261 ORTHO05D001168 1.2e-08 63.5 79 44.3
Os12g0177500 Oryza sativa ssp. japonica HOM05D000261 ORTHO05D001168 1.2e-08 63.5 77 48.1
CsaV3_4G028130 Cucumis sativus L. HOM05D000261 ORTHO05D001168 1.6e-08 63.2 83 48.2
AT1G49050 Arabidopsis thaliana HOM05D000261 ORTHO05D001168 2.7e-08 62.4 76 47.4
MBI06_g04546_MAGBIO Magnolia biondii HOM05D000261 ORTHO05D001168 2.7e-08 62.4 80 42.5
SalBow1G2881 Salvia bowleyana HOM05D000261 ORTHO05D001168 2.7e-08 62.4 77 45.5
CAN.G423.2 Capsicum annuum HOM05D000261 ORTHO05D001168 3.5e-08 62.0 79 45.6
Thhalv10011346m.g Eutrema salsugineum HOM05D000261 ORTHO05D001168 3.5e-08 62.0 73 47.9
Nn5g28360 Nelumbo nucifera HOM05D000261 ORTHO05D001168 3.5e-08 62.0 79 44.3
Carub.0001s3823 Capsella rubella HOM05D000261 ORTHO05D001168 4.5e-08 61.6 76 47.4
FvH4_2g27390 Fragaria vesca HOM05D000261 ORTHO05D001168 4.5e-08 61.6 71 47.9
CAN.G1280.2 Capsicum annuum HOM05D000261 ORTHO05D001168 5.9e-08 61.2 79 43.0
CAN.G1989.7 Capsicum annuum HOM05D000261 ORTHO05D001168 5.9e-08 61.2 79 43.0
Nn1g08878 Nelumbo nucifera HOM05D000261 ORTHO05D001168 5.9e-08 61.2 71 46.5
QL10p025000 Quercus lobata HOM05D000261 ORTHO05D001168 5.9e-08 61.2 76 47.4
Aa31LG10G4890 Aethionema arabicum HOM05D000261 ORTHO05D001168 7.7e-08 60.8 76 46.1
ATR0709G061 Amborella trichopoda HOM05D000261 ORTHO05D001168 7.7e-08 60.8 72 45.8
Os02g0730700 Oryza sativa ssp. japonica HOM05D000261 ORTHO05D001168 7.7e-08 60.8 71 47.9
CAN.G1989.6 Capsicum annuum HOM05D000261 ORTHO05D001168 1.0e-07 60.5 79 43.0
Os11g0183900 Oryza sativa ssp. japonica HOM05D000261 ORTHO05D001168 1.0e-07 60.5 78 44.9
Manes.01G154800 Manihot esculenta HOM05D000261 ORTHO05D001168 1.3e-07 60.1 71 45.1
Zm00001eb380190 Zea mays HOM05D000261 ORTHO05D001168 1.3e-07 60.1 80 41.2
Ca_12632_v3 Cicer arietinum L. HOM05D000261 ORTHO05D001168 1.7e-07 59.7 77 48.1
HPP92_005656 Vanilla planifolia HOM05D000261 ORTHO05D001168 1.7e-07 59.7 76 43.4
HPP92_005658 Vanilla planifolia HOM05D000261 ORTHO05D001168 1.7e-07 59.7 76 43.4
MSTRG.23486 Avicennia marina HOM05D000261 ORTHO05D001168 2.3e-07 59.3 91 40.7
Nitab4.5_0007111g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 2.3e-07 59.3 77 44.2
Psat6g041240 Pisum sativum HOM05D000261 ORTHO05D001168 2.3e-07 59.3 77 45.5
CiPaw.04G078300 Carya illinoinensis HOM05D000261 ORTHO05D001168 2.9e-07 58.9 76 44.7
Aqoxy3G03944 Aquilegia oxysepala HOM05D000261 ORTHO05D001168 3.8e-07 58.5 76 42.1
BcaB02g11295 Brassica carinata HOM05D000261 ORTHO05D001168 3.8e-07 58.5 76 44.7
CANSAT01G1704 Cannabis sativa HOM05D000261 ORTHO05D001168 3.8e-07 58.5 76 44.7
ClCG11G015850 Citrullus lanatus HOM05D000261 ORTHO05D001168 3.8e-07 58.5 85 43.5
BcaC05g27542 Brassica carinata HOM05D000261 ORTHO05D001168 5.0e-07 58.2 76 43.4
BcaNung06344 Brassica carinata HOM05D000261 ORTHO05D001168 5.0e-07 58.2 76 43.4
C05p35270 Brassica napus HOM05D000261 ORTHO05D001168 5.0e-07 58.2 76 43.4
BolC5t32241H Brassica oleracea HOM05D000261 ORTHO05D001168 5.0e-07 58.2 76 43.4
MBI06_g04547_MAGBIO Magnolia biondii HOM05D000261 ORTHO05D001168 5.0e-07 58.2 77 41.6
Manes.02G113600 Manihot esculenta HOM05D000261 ORTHO05D001168 5.0e-07 58.2 76 42.1
Medtr1g029810 Medicago truncatula HOM05D000261 ORTHO05D001168 5.0e-07 58.2 76 46.1
CSS0035214 Camellia sinensis var. sinensis HOM05D000261 ORTHO05D001168 6.6e-07 57.8 60 50.0
COL.COLO4_12103 Corchorus olitorius HOM05D000261 ORTHO05D001168 6.6e-07 57.8 71 45.1
Oeu011028.1 Olea europaea HOM05D000261 ORTHO05D001168 6.6e-07 57.8 91 39.6
SHI49491 Sapria himalayana HOM05D000261 ORTHO05D001168 6.6e-07 57.8 71 45.1
VMungo0251G3635 Vigna mungo HOM05D000261 ORTHO05D001168 6.6e-07 57.8 76 44.7
VMungo1309G2020 Vigna mungo HOM05D000261 ORTHO05D001168 6.6e-07 57.8 86 40.7
Aqoxy6G00252 Aquilegia oxysepala HOM05D000261 ORTHO05D001168 8.6e-07 57.4 85 41.2
Lalb_Chr17g0343661 Lupinus albus HOM05D000261 ORTHO05D001168 8.6e-07 57.4 77 46.8
Phvul.002G275100 Phaseolus vulgaris HOM05D000261 ORTHO05D001168 8.6e-07 57.4 73 46.6
RcHm_v2.0_Chr6g0296231 Rosa chinensis HOM05D000261 ORTHO05D001168 8.6e-07 57.4 76 43.4
Prupe.1G493500 Prunus persica HOM05D000261 ORTHO05D001168 1.1e-06 57.0 79 41.8
vmacro12763 Vaccinium macrocarpon HOM05D000261 ORTHO05D001168 1.1e-06 57.0 76 43.4
Actinidia06592 Actinidia chinensis HOM05D000261 ORTHO05D001168 1.5e-06 56.6 71 45.1
Cpa.g.sc37.27 Carica papaya HOM05D000261 ORTHO05D001168 1.5e-06 56.6 76 42.1
QL10p040580 Quercus lobata HOM05D000261 ORTHO05D001168 1.5e-06 56.6 78 42.3
A05p20800 Brassica napus HOM05D000261 ORTHO05D001168 1.9e-06 56.2 76 42.1
BraA05t20986Z Brassica rapa HOM05D000261 ORTHO05D001168 1.9e-06 56.2 76 42.1
Psat7g044480 Pisum sativum HOM05D000261 ORTHO05D001168 1.9e-06 56.2 71 45.1
PGR102G0413 Punica granatum HOM05D000261 ORTHO05D001168 1.9e-06 56.2 76 43.4
Zm00001eb091230 Zea mays HOM05D000261 ORTHO05D001168 1.9e-06 56.2 74 47.3
Aqoxy6G00251 Aquilegia oxysepala HOM05D000261 ORTHO05D001168 2.5e-06 55.8 71 42.3
Phvul.009G126200 Phaseolus vulgaris HOM05D000261 ORTHO05D001168 2.5e-06 55.8 86 40.7
Ca_16564_v3 Cicer arietinum L. HOM05D000261 ORTHO05D001168 3.3e-06 55.5 86 43.0
COL.COLO4_24736 Corchorus olitorius HOM05D000261 ORTHO05D001168 3.3e-06 55.5 58 44.8
Glyma.04G248700 Glycine max HOM05D000261 ORTHO05D001168 3.3e-06 55.5 86 41.9
Nitab4.5_0000322g0060 Nicotiana tabacum HOM05D000261 ORTHO05D001168 3.3e-06 55.5 77 41.6
Rhsim11G0069600 Rhododendron simsii HOM05D000261 ORTHO05D001168 3.3e-06 55.5 85 42.4
THA.LOC104819484 Tarenaya hassleriana HOM05D000261 ORTHO05D001168 3.3e-06 55.5 71 42.3
TPR.G37314 Trifolium pratense HOM05D000261 ORTHO05D001168 3.3e-06 55.5 71 45.1
Carub.0007s0698 Capsella rubella HOM05D000261 ORTHO05D001168 4.2e-06 55.1 76 40.8
CARHR241570 Cardamine hirsuta HOM05D000261 ORTHO05D001168 4.2e-06 55.1 76 40.8
Thhalv10025289m.g Eutrema salsugineum HOM05D000261 ORTHO05D001168 4.2e-06 55.1 76 42.1
Sp7g31220 Schrenkiella parvula HOM05D000261 ORTHO05D001168 4.2e-06 55.1 76 40.8
Haze_18655 Corylus avellana HOM05D000261 ORTHO05D001168 5.5e-06 54.7 65 50.8
Eucgr.H05086 Eucalyptus grandis HOM05D000261 ORTHO05D001168 5.5e-06 54.7 96 38.5
Eucgr.H05087 Eucalyptus grandis HOM05D000261 ORTHO05D001168 5.5e-06 54.7 71 46.5
Lj4A829T22 Lonicera japonica HOM05D000261 ORTHO05D001168 5.5e-06 54.7 76 43.4
Lalb_Chr08g0238041 Lupinus albus HOM05D000261 ORTHO05D001168 5.5e-06 54.7 71 46.5
Nitab4.5_0005296g0060 Nicotiana tabacum HOM05D000261 ORTHO05D001168 5.5e-06 54.7 61 45.9
QL10p024891 Quercus lobata HOM05D000261 ORTHO05D001168 5.5e-06 54.7 60 48.3
Rhsim10G0128200 Rhododendron simsii HOM05D000261 ORTHO05D001168 5.5e-06 54.7 71 43.7
TPR.G25787 Trifolium pratense HOM05D000261 ORTHO05D001168 5.5e-06 54.7 77 45.5
TWI60G0200 Tripterygium wilfordii HOM05D000261 ORTHO05D001168 5.5e-06 54.7 72 40.3
Zm00001eb408250 Zea mays HOM05D000261 ORTHO05D001168 5.5e-06 54.7 97 40.2
BcaC09g52165 Brassica carinata HOM05D000261 ORTHO05D001168 7.2e-06 54.3 76 40.8
DCAR_013175 Daucus carota HOM05D000261 ORTHO05D001168 7.2e-06 54.3 91 38.5
Glyma.05G195100 Glycine max HOM05D000261 ORTHO05D001168 7.2e-06 54.3 73 45.2
Glyma.08G002600 Glycine max HOM05D000261 ORTHO05D001168 7.2e-06 54.3 73 45.2
Gohir.A11G057800 Gossypium hirsutum HOM05D000261 ORTHO05D001168 7.2e-06 54.3 71 43.7
Gohir.D11G062000 Gossypium hirsutum HOM05D000261 ORTHO05D001168 7.2e-06 54.3 71 43.7
Gorai.007G066800 Gossypium raimondii HOM05D000261 ORTHO05D001168 7.2e-06 54.3 71 43.7
MBI06_g04548_MAGBIO Magnolia biondii HOM05D000261 ORTHO05D001168 7.2e-06 54.3 84 39.3
Sp1g35960 Schrenkiella parvula HOM05D000261 ORTHO05D001168 7.2e-06 54.3 60 45.0
Solyc06g009110.3 Solanum lycopersicum HOM05D000261 ORTHO05D001168 7.2e-06 54.3 80 42.5
PGSC0003DMG400011779 Solanum tuberosum HOM05D000261 ORTHO05D001168 7.2e-06 54.3 72 45.8
GSVIVG01022355001 Vitis vinifera HOM05D000261 ORTHO05D001168 7.2e-06 54.3 76 42.1
MSTRG.25373 Avicennia marina HOM05D000261 ORTHO05D001168 9.5e-06 53.9 72 43.1
Cfa002186 Carpinus fangiana HOM05D000261 ORTHO05D001168 9.5e-06 53.9 71 42.3
Lj4A632G47 Lonicera japonica HOM05D000261 ORTHO05D001168 9.5e-06 53.9 76 43.4
Lj1g0021812 Lotus japonicus HOM05D000261 ORTHO05D001168 9.5e-06 53.9 80 42.5
MD15G1136700 Malus domestica HOM05D000261 ORTHO05D001168 9.5e-06 53.9 71 43.7
Medtr8g094590 Medicago truncatula HOM05D000261 ORTHO05D001168 9.5e-06 53.9 71 45.1
Oeu037859.1 Olea europaea HOM05D000261 ORTHO05D001168 9.5e-06 53.9 91 38.5
Sc16g0009610 Simmondsia chinensis HOM05D000261 ORTHO05D001168 9.5e-06 53.9 76 42.1
Thecc.01G140600 Theobroma cacao HOM05D000261 ORTHO05D001168 9.5e-06 53.9 71 43.7
TWI31G0581 Tripterygium wilfordii HOM05D000261 ORTHO05D001168 9.5e-06 53.9 71 42.3


User provided reference genes

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