Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 1.1e-81 306.6 155 100.0
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 3.8e-42 175.3 130 70.0
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 9.3e-41 170.6 125 69.6
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 2.7e-40 169.1 131 65.6
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.7e-40 169.1 122 65.6
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 3.5e-40 168.7 130 63.1
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 1.3e-39 166.8 132 64.4
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.7e-39 166.4 130 63.8
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.3e-39 166.0 123 67.5
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 3.9e-39 165.2 130 63.1
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 5.1e-39 164.9 152 55.3
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 5.1e-39 164.9 118 69.5
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 8.7e-39 164.1 127 63.0
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 1.1e-38 163.7 130 63.1
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.5e-38 163.3 127 62.2
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.9e-38 162.9 129 62.0
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.9e-38 162.9 131 61.8
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.9e-38 162.9 127 62.2
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.5e-38 162.5 125 65.6
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 2.5e-38 162.5 129 63.6
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.5e-38 162.5 125 64.8
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 3.3e-38 162.2 127 63.0
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 3.3e-38 162.2 131 59.5
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 5.6e-38 161.4 116 67.2
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 5.6e-38 161.4 124 62.9
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 5.6e-38 161.4 130 60.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 7.3e-38 161.0 125 64.8
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 7.3e-38 161.0 130 60.0
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 7.3e-38 161.0 125 61.6
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 7.3e-38 161.0 129 60.5
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 7.3e-38 161.0 130 60.0
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 9.6e-38 160.6 144 58.3
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 9.6e-38 160.6 130 60.8
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.3e-37 160.2 130 64.6
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.3e-37 160.2 123 63.4
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.3e-37 160.2 130 60.0
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 2.1e-37 159.5 123 64.2
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 2.1e-37 159.5 143 58.7
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 3.6e-37 158.7 125 64.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 4.8e-37 158.3 131 59.5
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 6.2e-37 157.9 124 62.9
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 6.2e-37 157.9 132 57.6
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 8.1e-37 157.5 128 63.3
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 8.1e-37 157.5 132 60.6
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 8.1e-37 157.5 128 61.7
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.1e-36 157.1 128 61.7
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 1.4e-36 156.8 127 60.6
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.4e-36 156.8 131 61.8
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 1.8e-36 156.4 128 62.5
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.8e-36 156.4 129 58.1
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 2.4e-36 156.0 128 60.2
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 2.4e-36 156.0 131 58.8
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 3.1e-36 155.6 128 59.4
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 4.0e-36 155.2 131 60.3
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 5.3e-36 154.8 126 59.5
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 5.3e-36 154.8 129 61.2
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 6.9e-36 154.5 130 60.0
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 6.9e-36 154.5 128 59.4
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 6.9e-36 154.5 130 60.8
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 6.9e-36 154.5 125 61.6
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 6.9e-36 154.5 129 57.4
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 1.2e-35 153.7 129 58.1
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 2.0e-35 152.9 125 59.2
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.0e-35 152.9 126 60.3
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.6e-35 152.5 126 61.1
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.6e-35 152.5 127 57.5
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 3.4e-35 152.1 125 60.0
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 3.4e-35 152.1 130 59.2
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 4.5e-35 151.8 159 50.3
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 5.8e-35 151.4 129 58.1
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 5.8e-35 151.4 129 58.1
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 5.8e-35 151.4 130 58.5
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 9.9e-35 150.6 140 52.9
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.3e-34 150.2 128 57.8
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.3e-34 150.2 130 59.2
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.3e-34 150.2 124 58.9
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 3.8e-34 148.7 129 58.9
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 4.9e-34 148.3 114 64.0
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 4.9e-34 148.3 127 57.5
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 6.4e-34 147.9 122 60.7
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 8.4e-34 147.5 128 57.0
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.9e-33 146.4 124 58.9
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 2.4e-33 146.0 128 57.0
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.2e-33 145.6 125 56.0
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.2e-33 145.6 123 58.5
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 5.4e-33 144.8 124 58.1
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 7.1e-33 144.4 129 56.6
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.6e-32 143.3 114 61.4
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 2.1e-32 142.9 133 57.1
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 3.5e-32 142.1 128 56.2
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 4.6e-32 141.7 130 56.2
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 6.0e-32 141.4 122 59.8
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.0e-31 140.6 126 56.3
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.3e-31 140.2 125 57.6
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 2.3e-31 139.4 126 56.3
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.3e-31 139.4 126 56.3
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 3.0e-31 139.0 128 53.9
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 8.7e-31 137.5 128 53.9
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 8.7e-31 137.5 127 55.1
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 8.7e-31 137.5 137 54.0
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 5.6e-30 134.8 124 54.8
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.3e-29 133.7 122 55.7
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.3e-29 133.7 126 53.2
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 2.1e-29 132.9 124 57.3
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 4.8e-29 131.7 129 54.3
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 3.1e-28 129.0 119 58.0
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.0e-27 126.3 128 53.9
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 5.5e-25 118.2 118 53.4
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 7.1e-25 117.9 125 48.0
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 3.5e-24 115.5 125 47.2
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.5e-22 110.2 125 48.8
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.3e-21 107.1 142 47.2
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 6.2e-21 104.8 121 45.5
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 6.9e-20 101.3 81 58.0
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 4.5e-19 98.6 103 49.5
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 8.4e-18 94.4 76 63.2
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 3.5e-16 89.0 105 41.9
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 6.1e-16 88.2 125 41.6
SEGI_35230 Sequoiadendron giganteum HOM05D006402 ORTHO05D387249 8.7e-15 84.3 51 80.4
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 6.3e-13 78.2 92 46.7
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 9.0e-12 74.3 122 39.3
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 3.8e-10 68.9 125 33.6
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.2e-08 63.9 115 34.8
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 6.7e-07 58.2 55 61.8


User provided reference genes

Program Settings