Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 6.7e-75 283.9 138 100.0
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 7.4e-58 227.3 108 100.0
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 9.8e-34 147.1 94 74.5
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 6.3e-33 144.4 94 73.4
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 3.5e-31 138.7 124 57.3
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 4.5e-31 138.3 95 68.4
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 4.5e-31 138.3 95 70.5
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 1.7e-30 136.3 94 67.0
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 2.9e-30 135.6 91 68.1
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 2.9e-30 135.6 94 68.1
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 3.8e-30 135.2 105 60.0
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 3.8e-30 135.2 105 61.0
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 5.0e-30 134.8 95 67.4
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 6.6e-30 134.4 105 61.0
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 6.6e-30 134.4 95 67.4
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 8.6e-30 134.0 95 67.4
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 8.6e-30 134.0 94 66.0
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.1e-29 133.7 106 60.4
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.5e-29 133.3 95 67.4
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 1.9e-29 132.9 94 66.0
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 2.5e-29 132.5 95 67.4
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 2.5e-29 132.5 95 67.4
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 3.3e-29 132.1 95 66.3
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 3.3e-29 132.1 95 66.3
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 3.3e-29 132.1 95 66.3
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 3.3e-29 132.1 88 70.5
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 3.3e-29 132.1 97 66.0
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 7.2e-29 131.0 97 63.9
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 1.6e-28 129.8 90 67.8
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 1.6e-28 129.8 98 62.2
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.6e-28 129.8 97 61.9
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 2.1e-28 129.4 98 62.2
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 2.1e-28 129.4 97 62.9
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 2.8e-28 129.0 97 66.0
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.8e-28 129.0 97 63.9
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 2.8e-28 129.0 94 62.8
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 3.6e-28 128.6 90 67.8
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 4.7e-28 128.3 96 63.5
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 4.7e-28 128.3 96 63.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 4.7e-28 128.3 97 63.9
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 4.7e-28 128.3 98 60.2
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 6.1e-28 127.9 98 61.2
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 6.1e-28 127.9 98 61.2
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 8.0e-28 127.5 97 62.9
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 8.0e-28 127.5 97 61.9
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.0e-27 127.1 95 63.2
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.0e-27 127.1 105 57.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 1.0e-27 127.1 98 60.2
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.4e-27 126.7 96 60.4
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.4e-27 126.7 97 61.9
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 4.0e-27 125.2 94 60.6
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 4.0e-27 125.2 98 59.2
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 4.0e-27 125.2 96 61.5
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 5.2e-27 124.8 94 62.8
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 5.2e-27 124.8 96 62.5
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 5.2e-27 124.8 92 64.1
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 5.2e-27 124.8 96 62.5
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.2e-27 124.8 97 60.8
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 5.2e-27 124.8 95 63.2
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 6.8e-27 124.4 93 64.5
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 6.8e-27 124.4 99 60.6
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 6.8e-27 124.4 94 63.8
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 8.9e-27 124.0 94 60.6
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 8.9e-27 124.0 94 60.6
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 1.2e-26 123.6 87 67.8
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.2e-26 123.6 97 60.8
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.2e-26 123.6 79 74.7
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 1.2e-26 123.6 106 58.5
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.5e-26 123.2 98 62.2
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 1.5e-26 123.2 103 57.3
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 2.0e-26 122.9 98 59.2
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 2.6e-26 122.5 97 62.9
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.6e-26 122.5 94 61.7
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.6e-26 122.5 94 61.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 2.6e-26 122.5 95 60.0
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 3.4e-26 122.1 97 56.7
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 4.4e-26 121.7 88 67.0
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 4.4e-26 121.7 88 64.8
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 4.4e-26 121.7 87 65.5
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 5.7e-26 121.3 87 65.5
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 5.7e-26 121.3 96 59.4
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 5.7e-26 121.3 88 64.8
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 7.5e-26 120.9 95 63.2
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 7.5e-26 120.9 88 64.8
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 7.5e-26 120.9 79 70.9
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 9.8e-26 120.6 94 63.8
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 9.8e-26 120.6 94 60.6
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 9.8e-26 120.6 94 59.6
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.7e-25 119.8 107 60.7
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 2.9e-25 119.0 94 63.8
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 3.7e-25 118.6 90 65.6
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 3.7e-25 118.6 88 64.8
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 4.9e-25 118.2 88 64.8
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 8.3e-25 117.5 97 60.8
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.1e-24 117.1 88 64.8
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 1.4e-24 116.7 88 63.6
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 4.1e-24 115.2 97 58.8
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 7.0e-24 114.4 94 59.6
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 7.0e-24 114.4 94 59.6
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 9.2e-24 114.0 98 58.2
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 4.6e-23 111.7 90 63.3
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 5.9e-23 111.3 98 57.1
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.7e-22 109.8 88 61.4
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 1.7e-22 109.8 96 56.2
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.9e-22 109.0 79 67.1
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 1.9e-21 106.3 93 57.0
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 1.9e-21 106.3 107 48.6
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.2e-20 103.6 143 41.3
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 2.1e-20 102.8 59 78.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 4.4e-18 95.1 70 64.3
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 6.4e-17 91.3 57 75.4
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 5.4e-16 88.2 98 52.0
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 3.5e-15 85.5 83 45.8
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 3.4e-10 68.9 76 50.0
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 4.4e-10 68.6 34 88.2
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 3.2e-08 62.4 59 47.5


User provided reference genes

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