Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 9.5e-92 340.1 166 100.0
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 8.4e-32 141.0 130 53.1
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 4.6e-30 135.2 109 60.6
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 4.6e-30 135.2 109 58.7
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 5.1e-29 131.7 138 52.2
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 5.1e-29 131.7 109 58.7
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 5.1e-29 131.7 125 55.2
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 8.7e-29 131.0 109 58.7
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 2.5e-28 129.4 124 54.8
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 3.3e-28 129.0 109 57.8
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 4.3e-28 128.6 125 55.2
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 4.3e-28 128.6 110 56.4
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 5.7e-28 128.3 127 55.1
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 5.7e-28 128.3 138 54.3
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 7.4e-28 127.9 127 55.1
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 9.6e-28 127.5 127 55.1
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 9.6e-28 127.5 127 55.1
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.6e-27 126.7 138 50.0
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 1.6e-27 126.7 109 60.6
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.1e-27 126.3 127 55.1
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 2.1e-27 126.3 109 58.7
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 2.8e-27 125.9 120 55.0
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 3.7e-27 125.6 109 57.8
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 3.7e-27 125.6 109 59.6
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 3.7e-27 125.6 109 55.0
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 4.8e-27 125.2 109 56.9
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 6.2e-27 124.8 137 50.4
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 6.2e-27 124.8 108 58.3
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 6.2e-27 124.8 122 54.9
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 6.2e-27 124.8 124 53.2
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 6.2e-27 124.8 124 53.2
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 6.2e-27 124.8 108 59.3
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 8.2e-27 124.4 109 57.8
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.4e-26 123.6 109 58.7
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 1.4e-26 123.6 109 56.0
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.8e-26 123.2 109 57.8
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 1.8e-26 123.2 109 57.8
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 1.8e-26 123.2 109 56.0
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 2.4e-26 122.9 120 52.5
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 4.0e-26 122.1 109 56.0
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 4.0e-26 122.1 109 52.3
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 5.3e-26 121.7 110 56.4
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 5.3e-26 121.7 117 53.0
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 5.3e-26 121.7 120 53.3
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 5.3e-26 121.7 109 55.0
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 6.9e-26 121.3 109 56.9
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 6.9e-26 121.3 138 50.7
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 6.9e-26 121.3 139 48.2
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 9.0e-26 120.9 109 56.9
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 1.2e-25 120.6 120 50.8
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 1.5e-25 120.2 109 57.8
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 2.0e-25 119.8 109 56.0
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.0e-25 119.8 109 56.0
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 3.4e-25 119.0 109 55.0
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 4.5e-25 118.6 122 53.3
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 4.5e-25 118.6 120 51.7
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 4.5e-25 118.6 109 55.0
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 4.5e-25 118.6 127 52.8
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 7.6e-25 117.9 122 52.5
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 7.6e-25 117.9 108 55.6
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 1.0e-24 117.5 109 55.0
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.0e-24 117.5 109 52.3
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 2.2e-24 116.3 109 54.1
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 2.2e-24 116.3 109 51.4
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 2.9e-24 115.9 109 52.3
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 2.9e-24 115.9 109 52.3
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 3.8e-24 115.5 106 54.7
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 3.8e-24 115.5 122 50.8
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 5.0e-24 115.2 109 51.4
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 6.5e-24 114.8 106 54.7
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 8.4e-24 114.4 109 52.3
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 1.1e-23 114.0 108 50.9
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 4.2e-23 112.1 109 53.2
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 5.5e-23 111.7 109 53.2
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.2e-22 110.5 148 42.6
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 1.2e-22 110.5 111 51.4
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 2.1e-22 109.8 139 42.4
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 4.6e-22 108.6 121 50.4
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 6.1e-22 108.2 122 48.4
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 1.0e-21 107.5 120 45.8
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 1.3e-21 107.1 109 52.3
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 1.3e-21 107.1 109 51.4
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 1.8e-21 106.7 112 45.5
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 1.8e-21 106.7 109 52.3
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 3.0e-21 105.9 139 41.7
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 1.1e-20 104.0 109 50.5
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 7.4e-20 101.3 140 42.1
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 9.7e-20 100.9 109 49.5
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 9.7e-20 100.9 109 49.5
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 1.3e-19 100.5 109 49.5
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 2.2e-19 99.8 109 49.5
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 2.8e-19 99.4 109 50.5
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 2.8e-19 99.4 109 50.5
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 3.7e-19 99.0 109 46.8
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 4.8e-19 98.6 109 45.0
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 6.3e-19 98.2 109 49.5
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 6.3e-19 98.2 109 49.5
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 1.1e-18 97.4 111 45.0
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.4e-18 97.1 129 41.9
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 1.8e-18 96.7 109 49.5
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 1.8e-18 96.7 109 49.5
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 1.8e-18 96.7 109 49.5
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 2.0e-17 93.2 109 47.7
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 4.5e-17 92.0 109 46.8
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.9e-15 86.7 109 39.4
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.5e-15 86.3 144 40.3
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 4.2e-15 85.5 134 41.0
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.8e-11 72.8 109 36.7
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 1.1e-10 70.9 139 32.4
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 7.9e-06 54.7 130 34.6


User provided reference genes

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