Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22543 Sequoiadendron giganteum HOM05D003423 ORTHO05D003910 3.8e-111 404.8 200 100.0
GSVIVG01014644001 Vitis vinifera HOM05D003423 ORTHO05D003910 6.8e-36 154.8 181 47.5
Pp3c5_3280 Physcomitrium patens HOM05D003423 ORTHO05D003910 3.4e-35 152.5 211 46.0
CiPaw.12G136700 Carya illinoinensis HOM05D003423 ORTHO05D003910 9.8e-35 151.0 175 48.6
Hma1.2p1_0090F.1_g045620 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 2.2e-34 149.8 162 51.2
AagrBONN_evm.TU.Sc2ySwM_228.5488 Anthoceros agrestis HOM05D003423 ORTHO05D003910 3.7e-34 149.1 102 71.6
QL05p083582 Quercus lobata HOM05D003423 ORTHO05D003910 6.4e-34 148.3 164 49.4
QL05p083734 Quercus lobata HOM05D003423 ORTHO05D003910 6.4e-34 148.3 164 49.4
FAN09G1601 Fragaria x ananassa HOM05D003423 ORTHO05D003910 8.3e-34 147.9 163 51.5
Eucgr.F03997 Eucalyptus grandis HOM05D003423 ORTHO05D003910 1.8e-33 146.7 185 46.5
FvH4_6g37480 Fragaria vesca HOM05D003423 ORTHO05D003910 1.8e-33 146.7 166 50.6
FAN05G4329 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.8e-33 146.7 163 50.9
FAN14G2430 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.8e-33 146.7 166 50.6
Dinv37806 Davidia involucrata HOM05D003423 ORTHO05D003910 3.2e-33 146.0 168 50.0
FAN02G3068 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.2e-33 146.0 163 50.9
SMO361G0751 Selaginella moellendorffii HOM05D003423 ORTHO05D003910 3.2e-33 146.0 164 49.4
Ciclev10027497m.g Citrus clementina HOM05D003423 ORTHO05D003910 7.0e-33 144.8 181 48.1
Lsat_1_v5_gn_1_26441 Lactuca sativa HOM05D003423 ORTHO05D003910 7.0e-33 144.8 187 47.6
RcHm_v2.0_Chr2g0150321 Rosa chinensis HOM05D003423 ORTHO05D003910 7.0e-33 144.8 163 50.3
MBI16_g46430_MAGBIO Magnolia biondii HOM05D003423 ORTHO05D003910 1.6e-32 143.7 186 47.3
PGR102G0515 Punica granatum HOM05D003423 ORTHO05D003910 1.6e-32 143.7 163 54.6
Nn3g19300 Nelumbo nucifera HOM05D003423 ORTHO05D003910 4.6e-32 142.1 164 48.2
Cc04_g00490 Coffea canephora HOM05D003423 ORTHO05D003910 6.0e-32 141.7 162 49.4
ATR0580G345 Amborella trichopoda HOM05D003423 ORTHO05D003910 7.8e-32 141.4 176 50.6
Rhsim08G0246600 Rhododendron simsii HOM05D003423 ORTHO05D003910 7.8e-32 141.4 162 50.0
Atru.chr1.2766 Acer truncatum HOM05D003423 ORTHO05D003910 1.0e-31 141.0 162 49.4
Nn1g07481 Nelumbo nucifera HOM05D003423 ORTHO05D003910 1.0e-31 141.0 199 43.7
vmacro18704 Vaccinium macrocarpon HOM05D003423 ORTHO05D003910 1.0e-31 141.0 162 51.9
Aqoxy6G02866 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 1.7e-31 140.2 196 42.3
Mapoly0109s0050 Marchantia polymorpha HOM05D003423 ORTHO05D003910 3.0e-31 139.4 127 55.1
Actinidia21857 Actinidia chinensis HOM05D003423 ORTHO05D003910 3.9e-31 139.0 162 51.9
Prupe.3G168300 Prunus persica HOM05D003423 ORTHO05D003910 3.9e-31 139.0 168 47.6
Hund05673 Selenicereus undatus HOM05D003423 ORTHO05D003910 3.9e-31 139.0 181 45.9
MD09G1157700 Malus domestica HOM05D003423 ORTHO05D003910 5.0e-31 138.7 163 49.7
Oeu041432.1 Olea europaea HOM05D003423 ORTHO05D003910 6.6e-31 138.3 186 44.1
TAR624G0752 Trochodendron aralioides HOM05D003423 ORTHO05D003910 6.6e-31 138.3 194 45.4
Manes.15G061600 Manihot esculenta HOM05D003423 ORTHO05D003910 8.6e-31 137.9 164 50.0
Aqoxy2G03521 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 1.1e-30 137.5 186 42.5
C03p93330 Brassica napus HOM05D003423 ORTHO05D003910 1.5e-30 137.1 194 44.3
CANSAT11G1165 Cannabis sativa HOM05D003423 ORTHO05D003910 1.5e-30 137.1 178 45.5
MSTRG.22510 Avicennia marina HOM05D003423 ORTHO05D003910 1.9e-30 136.7 164 48.8
C03p92860 Brassica napus HOM05D003423 ORTHO05D003910 1.9e-30 136.7 194 44.3
BolC3t21592H Brassica oleracea HOM05D003423 ORTHO05D003910 1.9e-30 136.7 194 44.3
CAN.G790.42 Capsicum annuum HOM05D003423 ORTHO05D003910 2.5e-30 136.3 165 49.7
Haze_09806 Corylus avellana HOM05D003423 ORTHO05D003910 2.5e-30 136.3 88 75.0
CSS0034763 Camellia sinensis var. sinensis HOM05D003423 ORTHO05D003910 3.3e-30 136.0 192 45.3
CSS0038448 Camellia sinensis var. sinensis HOM05D003423 ORTHO05D003910 3.3e-30 136.0 192 45.3
Sabra08G0005700 Salix brachista HOM05D003423 ORTHO05D003910 3.3e-30 136.0 168 48.8
HanXRQChr11g0333391 Helianthus annuus HOM05D003423 ORTHO05D003910 4.3e-30 135.6 109 64.2
ClCG09G021170 Citrullus lanatus HOM05D003423 ORTHO05D003910 5.6e-30 135.2 229 41.5
Potri.008G009700 Populus trichocarpa HOM05D003423 ORTHO05D003910 5.6e-30 135.2 162 49.4
TAR626G1285 Trochodendron aralioides HOM05D003423 ORTHO05D003910 5.6e-30 135.2 196 41.8
BolC3t21631H Brassica oleracea HOM05D003423 ORTHO05D003910 7.3e-30 134.8 203 42.9
Ca_00986_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 7.3e-30 134.8 162 47.5
Ca_01000_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 7.3e-30 134.8 162 47.5
Sp1g41520 Schrenkiella parvula HOM05D003423 ORTHO05D003910 7.3e-30 134.8 216 42.6
SalBow6G3752 Salvia bowleyana HOM05D003423 ORTHO05D003910 1.2e-29 134.0 166 48.8
Duzib213G0099 Durio zibethinus HOM05D003423 ORTHO05D003910 1.6e-29 133.7 88 73.9
Aqoxy2G00648 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 2.1e-29 133.3 186 41.9
arahy.Tifrunner.gnm1.ann1.08VBYE Arachis hypogaea HOM05D003423 ORTHO05D003910 2.1e-29 133.3 95 65.3
EL10Ac7g18155 Beta vulgaris HOM05D003423 ORTHO05D003910 2.1e-29 133.3 162 48.1
Medtr3g058580 Medicago truncatula HOM05D003423 ORTHO05D003910 2.1e-29 133.3 95 66.3
Nitab4.5_0001691g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 2.1e-29 133.3 162 48.1
Psat7g121520 Pisum sativum HOM05D003423 ORTHO05D003910 2.1e-29 133.3 109 58.7
Dinv10321 Davidia involucrata HOM05D003423 ORTHO05D003910 2.8e-29 132.9 176 46.6
Peaxi162Scf00038g02438 Petunia axillaris HOM05D003423 ORTHO05D003910 2.8e-29 132.9 162 48.8
SGA_v2.0_scaffold122G33294 Striga asiatica HOM05D003423 ORTHO05D003910 2.8e-29 132.9 163 46.6
arahy.Tifrunner.gnm1.ann1.FCEI8S Arachis hypogaea HOM05D003423 ORTHO05D003910 3.6e-29 132.5 95 65.3
CiPaw.11G202400 Carya illinoinensis HOM05D003423 ORTHO05D003910 3.6e-29 132.5 102 63.7
DCAR_007666 Daucus carota HOM05D003423 ORTHO05D003910 3.6e-29 132.5 153 48.4
THA.LOC104810286 Tarenaya hassleriana HOM05D003423 ORTHO05D003910 3.6e-29 132.5 211 40.8
BraA08t32074Z Brassica rapa HOM05D003423 ORTHO05D003910 4.7e-29 132.1 218 40.8
Eucgr.F02068 Eucalyptus grandis HOM05D003423 ORTHO05D003910 4.7e-29 132.1 95 67.4
Actinidia33816 Actinidia chinensis HOM05D003423 ORTHO05D003910 6.2e-29 131.7 162 46.9
PSO063G5220 Papaver somniferum HOM05D003423 ORTHO05D003910 6.2e-29 131.7 196 41.3
PSO782G1032 Papaver somniferum HOM05D003423 ORTHO05D003910 6.2e-29 131.7 196 41.3
Sed0002105 Sechium edule HOM05D003423 ORTHO05D003910 6.2e-29 131.7 88 73.9
Gohir.A04G002900 Gossypium hirsutum HOM05D003423 ORTHO05D003910 1.1e-28 131.0 88 71.6
Gohir.D13G137300 Gossypium hirsutum HOM05D003423 ORTHO05D003910 1.1e-28 131.0 88 71.6
Hma1.2p1_0036F.1_g022545 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 1.4e-28 130.6 154 47.4
Hma1.2p1_0036F.1_g022550 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 1.4e-28 130.6 154 47.4
Glyma.18G078800 Glycine max HOM05D003423 ORTHO05D003910 1.8e-28 130.2 88 69.3
Lj1A888G39 Lonicera japonica HOM05D003423 ORTHO05D003910 2.3e-28 129.8 102 61.8
ECA236G2484 Erigeron canadensis HOM05D003423 ORTHO05D003910 3.1e-28 129.4 197 42.1
FAN21G0447 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.1e-28 129.4 95 64.2
Gorai.013G153900 Gossypium raimondii HOM05D003423 ORTHO05D003910 3.1e-28 129.4 88 70.5
Lj6g0015704 Lotus japonicus HOM05D003423 ORTHO05D003910 3.1e-28 129.4 95 65.3
Manes.03G139900 Manihot esculenta HOM05D003423 ORTHO05D003910 3.1e-28 129.4 242 38.8
Nitab4.5_0002885g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 3.1e-28 129.4 162 46.9
vmacro09657 Vaccinium macrocarpon HOM05D003423 ORTHO05D003910 3.1e-28 129.4 127 54.3
CsaV3_7G018340 Cucumis sativus L. HOM05D003423 ORTHO05D003910 4.0e-28 129.0 229 41.0
PGSC0003DMG400009184 Solanum tuberosum HOM05D003423 ORTHO05D003910 4.0e-28 129.0 162 46.9
arahy.Tifrunner.gnm1.ann1.HUB5JH Arachis hypogaea HOM05D003423 ORTHO05D003910 5.2e-28 128.6 95 63.2
Ciclev10010194m.g Citrus clementina HOM05D003423 ORTHO05D003910 5.2e-28 128.6 187 42.8
Thecc.07G016500 Theobroma cacao HOM05D003423 ORTHO05D003910 5.2e-28 128.6 88 70.5
Phvul.006G055600 Phaseolus vulgaris HOM05D003423 ORTHO05D003910 6.8e-28 128.3 88 68.2
TWI39G0701 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 6.8e-28 128.3 102 59.8
BcaC06g31883 Brassica carinata HOM05D003423 ORTHO05D003910 8.9e-28 127.9 212 42.0
BraA08t32113Z Brassica rapa HOM05D003423 ORTHO05D003910 8.9e-28 127.9 222 38.7
Cpa.g.sc12.172 Carica papaya HOM05D003423 ORTHO05D003910 8.9e-28 127.9 230 37.4
DCAR_017083 Daucus carota HOM05D003423 ORTHO05D003910 8.9e-28 127.9 149 49.0
HanXRQChr09g0277351 Helianthus annuus HOM05D003423 ORTHO05D003910 8.9e-28 127.9 166 44.6
Hund01908 Selenicereus undatus HOM05D003423 ORTHO05D003910 8.9e-28 127.9 88 68.2
A08p00550 Brassica napus HOM05D003423 ORTHO05D003910 1.2e-27 127.5 160 47.5
Carub.0001s4451 Capsella rubella HOM05D003423 ORTHO05D003910 1.2e-27 127.5 102 62.7
RcHm_v2.0_Chr5g0054021 Rosa chinensis HOM05D003423 ORTHO05D003910 1.2e-27 127.5 241 38.6
TPR.G30741 Trifolium pratense HOM05D003423 ORTHO05D003910 1.2e-27 127.5 95 61.1
Aa31LG10G260 Aethionema arabicum HOM05D003423 ORTHO05D003910 1.5e-27 127.1 217 38.7
EL10Ac4g07604 Beta vulgaris HOM05D003423 ORTHO05D003910 1.5e-27 127.1 212 40.6
Gorai.010G207500 Gossypium raimondii HOM05D003423 ORTHO05D003910 1.5e-27 127.1 88 70.5
QL08p004807 Quercus lobata HOM05D003423 ORTHO05D003910 1.5e-27 127.1 102 61.8
HPP92_018337 Vanilla planifolia HOM05D003423 ORTHO05D003910 1.5e-27 127.1 172 44.2
Zm00001eb374280 Zea mays HOM05D003423 ORTHO05D003910 2.0e-27 126.7 170 45.3
AL1G64060 Arabidopsis lyrata HOM05D003423 ORTHO05D003910 3.4e-27 125.9 215 40.0
Ca_12436_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 3.4e-27 125.9 114 54.4
FvH4_3g29470 Fragaria vesca HOM05D003423 ORTHO05D003910 3.4e-27 125.9 95 63.2
Lj3g0006153 Lotus japonicus HOM05D003423 ORTHO05D003910 3.4e-27 125.9 162 47.5
Os06g0191200 Oryza sativa ssp. japonica HOM05D003423 ORTHO05D003910 3.4e-27 125.9 166 44.6
Rhsim04G0013800 Rhododendron simsii HOM05D003423 ORTHO05D003910 3.4e-27 125.9 125 54.4
Atru.chr2.3667 Acer truncatum HOM05D003423 ORTHO05D003910 4.4e-27 125.6 113 58.4
FAN11G0659 Fragaria x ananassa HOM05D003423 ORTHO05D003910 4.4e-27 125.6 121 55.4
Lsat_1_v5_gn_4_89280 Lactuca sativa HOM05D003423 ORTHO05D003910 4.4e-27 125.6 163 47.2
VMungo0540G0232 Vigna mungo HOM05D003423 ORTHO05D003910 4.4e-27 125.6 88 67.0
MELO3C024918.2 Cucumis melo HOM05D003423 ORTHO05D003910 5.8e-27 125.2 235 39.6
AUR62036422 Chenopodium quinoa HOM05D003423 ORTHO05D003910 7.5e-27 124.8 88 67.0
COL.COLO4_09809 Corchorus olitorius HOM05D003423 ORTHO05D003910 7.5e-27 124.8 223 39.0
Lj9A540T81 Lonicera japonica HOM05D003423 ORTHO05D003910 7.5e-27 124.8 163 43.6
AUR62036428 Chenopodium quinoa HOM05D003423 ORTHO05D003910 9.8e-27 124.4 88 67.0
Prupe.4G239900 Prunus persica HOM05D003423 ORTHO05D003910 1.3e-26 124.0 148 48.6
Ah.06g181290 Amaranthus hybridus HOM05D003423 ORTHO05D003910 1.7e-26 123.6 211 37.9
CARHR045630 Cardamine hirsuta HOM05D003423 ORTHO05D003910 2.2e-26 123.2 105 59.0
AUR62017070 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.2e-26 123.2 88 65.9
FAN25G2240 Fragaria x ananassa HOM05D003423 ORTHO05D003910 2.2e-26 123.2 95 62.1
Oeu051387.2 Olea europaea HOM05D003423 ORTHO05D003910 2.9e-26 122.9 162 45.1
unitig_27.g25148 Utricularia gibba HOM05D003423 ORTHO05D003910 4.9e-26 122.1 195 38.5
AT1G55915 Arabidopsis thaliana HOM05D003423 ORTHO05D003910 8.3e-26 121.3 215 38.1
Lalb_Chr15g0081991 Lupinus albus HOM05D003423 ORTHO05D003910 1.1e-25 120.9 164 47.0
Potri.011G092900 Populus trichocarpa HOM05D003423 ORTHO05D003910 1.1e-25 120.9 111 59.5
SHI26527 Sapria himalayana HOM05D003423 ORTHO05D003910 1.4e-25 120.6 173 43.4
Actinidia37163 Actinidia chinensis HOM05D003423 ORTHO05D003910 1.9e-25 120.2 152 47.4
HPP92_017868 Vanilla planifolia HOM05D003423 ORTHO05D003910 2.4e-25 119.8 183 42.1
Sed0010386 Sechium edule HOM05D003423 ORTHO05D003910 4.1e-25 119.0 166 45.8
Nitab4.5_0000163g0280 Nicotiana tabacum HOM05D003423 ORTHO05D003910 9.2e-25 117.9 224 36.2
BcaC01g01534 Brassica carinata HOM05D003423 ORTHO05D003910 2.0e-24 116.7 194 40.7
MD11G1201700 Malus domestica HOM05D003423 ORTHO05D003910 2.0e-24 116.7 88 65.9
VMungo1080G0425 Vigna mungo HOM05D003423 ORTHO05D003910 2.0e-24 116.7 163 44.8
TWI38G0990 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 2.7e-24 116.3 88 63.6
Nitab4.5_0002517g0010 Nicotiana tabacum HOM05D003423 ORTHO05D003910 3.5e-24 115.9 221 35.7
Peaxi162Scf00955g00007 Petunia axillaris HOM05D003423 ORTHO05D003910 4.6e-24 115.5 95 60.0
Sc16g0007990 Simmondsia chinensis HOM05D003423 ORTHO05D003910 4.6e-24 115.5 142 48.6
SGA_v2.0_scaffold42G16002 Striga asiatica HOM05D003423 ORTHO05D003910 4.6e-24 115.5 188 39.9
MSTRG.14479 Avicennia marina HOM05D003423 ORTHO05D003910 1.1e-22 110.9 86 64.0
PGSC0003DMG400029797 Solanum tuberosum HOM05D003423 ORTHO05D003910 1.1e-22 110.9 88 62.5
CBR_g12763 Chara braunii HOM05D003423 ORTHO05D003910 9.5e-22 107.8 89 59.6
Gohir.A06G044200 Gossypium hirsutum HOM05D003423 ORTHO05D003910 1.6e-21 107.1 80 68.8
AUR62025667 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.1e-21 106.7 86 59.3
CDE04G0040 Ceratophyllum demersum HOM05D003423 ORTHO05D003910 8.1e-21 104.8 168 39.9
AUR62037470 Chenopodium quinoa HOM05D003423 ORTHO05D003910 1.4e-20 104.0 87 59.8
AUR62001338 Chenopodium quinoa HOM05D003423 ORTHO05D003910 3.1e-20 102.8 86 58.1
Potri.010G249400 Populus trichocarpa HOM05D003423 ORTHO05D003910 6.8e-20 101.7 191 38.7
Aqoxy102s004 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 4.4e-19 99.0 186 33.9
ClCG04G000610 Citrullus lanatus HOM05D003423 ORTHO05D003910 1.3e-18 97.4 164 39.6
Cc05_g14820 Coffea canephora HOM05D003423 ORTHO05D003910 1.7e-18 97.1 203 38.4
AUR62028647 Chenopodium quinoa HOM05D003423 ORTHO05D003910 1.7e-15 87.0 75 57.3
MELO3C009034.2 Cucumis melo HOM05D003423 ORTHO05D003910 1.5e-14 84.0 58 74.1
Migut.H01764 Erythranthe guttata HOM05D003423 ORTHO05D003910 4.3e-14 82.4 201 31.8
Solyc12g015660.2 Solanum lycopersicum HOM05D003423 ORTHO05D003910 4.7e-13 79.0 95 45.3
Sopen12g007570 Solanum pennellii HOM05D003423 ORTHO05D003910 1.4e-12 77.4 158 36.1
Sabra10G0194100 Salix brachista HOM05D003423 ORTHO05D003910 4.0e-12 75.9 51 74.5
AUR62024542 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.6e-11 73.2 61 57.4
Lj6g0002743 Lotus japonicus HOM05D003423 ORTHO05D003910 3.4e-11 72.8 236 30.1
Thhalv10011589m.g Eutrema salsugineum HOM05D003423 ORTHO05D003910 1.9e-09 67.0 181 31.5
ECA240G2479 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.7e-07 60.5 123 35.8
Cre07.g333850 Chlamydomonas reinhardtii HOM05D003423 ORTHO05D003910 1.5e-06 57.4 96 40.6


User provided reference genes

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