Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22535 Sequoiadendron giganteum HOM05D001081 ORTHO05D004708 1.6e-55 219.2 106 100.0
HanXRQChr08g0225291 Helianthus annuus HOM05D001081 ORTHO05D004708 7.5e-26 120.6 102 55.9
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 8.3e-25 117.1 98 52.0
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 1.9e-24 115.9 98 51.0
DCAR_008935 Daucus carota HOM05D001081 ORTHO05D004708 7.0e-24 114.0 99 51.5
Hma1.2p1_0404F.1_g145350 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 1.2e-23 113.2 103 52.4
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 1.2e-23 113.2 98 55.1
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 2.0e-23 112.5 98 55.1
HanXRQChr08g0225341 Helianthus annuus HOM05D001081 ORTHO05D004708 4.6e-23 111.3 103 53.4
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 6.0e-23 110.9 101 52.5
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 6.0e-23 110.9 97 52.6
Solyc03g083130.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 7.8e-23 110.5 97 52.6
Lsat_1_v5_gn_8_5261 Lactuca sativa HOM05D001081 ORTHO05D004708 1.3e-22 109.8 99 56.6
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 1.3e-22 109.8 98 54.1
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 1.7e-22 109.4 97 49.5
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.7e-22 109.4 98 52.0
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 2.3e-22 109.0 98 52.0
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 2.3e-22 109.0 98 52.0
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 3.0e-22 108.6 98 50.0
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 5.0e-22 107.8 98 50.0
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 5.0e-22 107.8 98 52.0
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 8.6e-22 107.1 99 53.5
Prupe.2G309600 Prunus persica HOM05D001081 ORTHO05D004708 8.6e-22 107.1 97 49.5
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 1.1e-21 106.7 98 52.0
HanXRQChr08g0225301 Helianthus annuus HOM05D001081 ORTHO05D004708 2.5e-21 105.5 90 58.9
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 4.3e-21 104.8 97 44.3
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 4.3e-21 104.8 98 51.0
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 4.3e-21 104.8 98 51.0
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 4.3e-21 104.8 98 49.0
Nitab4.5_0006933g0030 Nicotiana tabacum HOM05D001081 ORTHO05D004708 4.3e-21 104.8 89 48.3
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 4.3e-21 104.8 98 49.0
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 5.6e-21 104.4 97 54.6
ATR0602G075 Amborella trichopoda HOM05D001081 ORTHO05D004708 7.3e-21 104.0 102 46.1
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 9.5e-21 103.6 99 50.5
MD07G1288100 Malus domestica HOM05D001081 ORTHO05D004708 1.2e-20 103.2 97 49.5
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 2.1e-20 102.4 96 46.9
Hma1.2p1_0404F.1_g145390 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 2.1e-20 102.4 97 50.5
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 2.1e-20 102.4 98 51.0
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 2.1e-20 102.4 98 50.0
Lalb_Chr10g0091361 Lupinus albus HOM05D001081 ORTHO05D004708 2.8e-20 102.1 97 49.5
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 2.8e-20 102.1 97 53.6
FAN06G1778 Fragaria x ananassa HOM05D001081 ORTHO05D004708 3.6e-20 101.7 98 49.0
FAN06G3553 Fragaria x ananassa HOM05D001081 ORTHO05D004708 3.6e-20 101.7 98 49.0
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 4.7e-20 101.3 98 50.0
Sabra12G0016000 Salix brachista HOM05D001081 ORTHO05D004708 4.7e-20 101.3 99 52.5
FAN01G0187 Fragaria x ananassa HOM05D001081 ORTHO05D004708 6.2e-20 100.9 98 48.0
Peaxi162Scf00740g00138 Petunia axillaris HOM05D001081 ORTHO05D004708 6.2e-20 100.9 98 45.9
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 8.1e-20 100.5 102 47.1
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 1.1e-19 100.1 105 48.6
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 1.4e-19 99.8 98 44.9
Oeu041052.4 Olea europaea HOM05D001081 ORTHO05D004708 5.2e-19 97.8 100 47.0
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 6.8e-19 97.4 98 49.0
Ca_12793_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 8.9e-19 97.1 98 50.0
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 8.9e-19 97.1 98 50.0
Cpa.g.sc3.89 Carica papaya HOM05D001081 ORTHO05D004708 1.2e-18 96.7 109 42.2
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 1.5e-18 96.3 99 47.5
Glyma.17G128700 Glycine max HOM05D001081 ORTHO05D004708 2.0e-18 95.9 98 48.0
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 2.6e-18 95.5 98 48.0
Sabra15G0067900 Salix brachista HOM05D001081 ORTHO05D004708 2.6e-18 95.5 99 50.5
AUR62019407 Chenopodium quinoa HOM05D001081 ORTHO05D004708 4.4e-18 94.7 98 46.9
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 4.4e-18 94.7 98 44.9
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 5.8e-18 94.4 98 48.0
RcHm_v2.0_Chr1g0381531 Rosa chinensis HOM05D001081 ORTHO05D004708 9.8e-18 93.6 99 45.5
PSO063G4550 Papaver somniferum HOM05D001081 ORTHO05D004708 2.9e-17 92.0 97 44.3
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 3.7e-17 91.7 98 45.9
Sabra11G0071800 Salix brachista HOM05D001060 ORTHO05D004708 6.4e-17 90.9 99 48.5
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 8.3e-17 90.5 100 45.0
CANSAT21G2573 Cannabis sativa HOM05D001081 ORTHO05D004708 8.3e-17 90.5 100 45.0
Sp2g23080 Schrenkiella parvula HOM05D001081 ORTHO05D004708 5.4e-16 87.8 97 47.4
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 9.2e-16 87.0 98 39.8
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.5e-15 85.1 98 43.9
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 4.6e-15 84.7 97 45.4
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 4.6e-15 84.7 98 42.9
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 6.0e-15 84.3 97 47.4
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 6.0e-15 84.3 96 44.8
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 6.0e-15 84.3 96 44.8
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 7.8e-15 84.0 102 39.2
Aa31LG11G3510 Aethionema arabicum HOM05D001081 ORTHO05D004708 1.0e-14 83.6 97 44.3
BcaNung01219 Brassica carinata HOM05D001081 ORTHO05D004708 1.0e-14 83.6 97 44.3
Medtr1g007990 Medicago truncatula HOM05D001081 ORTHO05D004708 1.3e-14 83.2 90 42.2
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 1.7e-14 82.8 97 46.4
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 1.7e-14 82.8 97 44.3
CANSAT21G1825 Cannabis sativa HOM05D001081 ORTHO05D004708 2.3e-14 82.4 100 43.0
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 3.0e-14 82.0 97 45.4
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 3.0e-14 82.0 97 45.4
CARHR189250 Cardamine hirsuta HOM05D001081 ORTHO05D004708 3.9e-14 81.6 102 38.2
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.1e-13 80.1 97 45.4
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.5e-13 79.7 102 39.2
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 2.5e-13 79.0 98 39.8
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 2.5e-13 79.0 98 39.8
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 2.5e-13 79.0 98 39.8
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 2.5e-13 79.0 97 41.2
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 4.3e-13 78.2 96 39.6
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 4.3e-13 78.2 89 42.7
SalBow4G1120 Salvia bowleyana HOM05D001081 ORTHO05D004708 7.3e-13 77.4 92 45.7
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 8.1e-12 73.9 97 42.3
Mapoly0076s0015 Marchantia polymorpha HOM05D001081 ORTHO05D004708 5.2e-11 71.2 99 43.4
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 5.2e-11 71.2 101 39.6
AagrBONN_evm.TU.Sc2ySwM_117.3719 Anthoceros agrestis HOM05D001081 ORTHO05D004708 6.8e-11 70.9 78 48.7
Thecc.03G196700 Theobroma cacao HOM05D001081 ORTHO05D004708 9.9e-10 67.0 103 38.8
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 1.3e-09 66.6 78 47.4
Mapoly0111s0028 Marchantia polymorpha HOM05D001081 ORTHO05D004708 1.3e-09 66.6 97 40.2
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 1.7e-06 56.2 75 33.3
SMO213G0001 Selaginella moellendorffii HOM05D001081 ORTHO05D004708 2.3e-06 55.8 77 40.3


User provided reference genes

Program Settings